Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,5910A.26.9% 279.3 / 101.8 105intergenic (+18/‑16)metW/metVtRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (72/4);  new base . (26/2);  total (98/7)
Fisher's exact test for biased strand distribution p-value = 6.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.29e-01

Only 100 of 109 total aligned reads displayed.

AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947482‑2947740
                                                                                                               |                                                                                                                                                       
ggtgccttccGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCTGCGGGATCATAACCCGAAGGTCGTCGGGTCAAATACGGCCCCCGCAACCAA‑TC‑AAATTTGCTGTAATAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCtc                                                                                                                <  1:599567/142‑1 (MQ=14)
                    gggggAGCAGCCTGGTAGCTCGTCGGGCGCATAACCCGAAGGGCGTCGGTTCAAATCGGGCCCCCGCAACCAA‑TG‑AACTTTTTAGCAGTAAACGGAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAg                                                                                            <  8:1330358/148‑1 (MQ=11)
                                                                gtcgGTTCAAATCCGGCCCCCGCAACCAA‑TG‑AAATTTCATGATGTAAAGGGAGTAGGGTGAAGCGGGGTGGAGAAGACTGGTAGCTGGTCGGGCTCATAAAACCACGGTCGGCGGGCCAACTCCGGCCCACGCAACCAATTATTGAACAcc                                                >  8:82350/1‑151 (MQ=14)
                                                                gtcgGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCCACCAATTATTGAACAcc                                                >  8:403589/1‑151 (MQ=255)
                                                                gtccGTTCAAATCCGCCCCCCGCAACCAA‑TT‑AAATTTTTTTAAATTAAAGCAGTACGGTGACGCTGTGTTGATCAGCCTGGTAGCTCGTCGTGCTCAAATCTCTAAGGTTGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAcc                                                <  4:1627628/151‑1 (MQ=11)
                                                                          aTCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑TACGGgtg                                     >  1:533099/1‑151 (MQ=255)
                                                                              ggCCCCCGCAACCAA‑TC‑AAATTTCAACAAGTAAAAGCAGTACGGTGACGCGGTCTGGAAAAACATCGAAGCTCGACGCGCTAATAAAGCGAACGTATTACGTACAAATCCGGCCACCGCAAACAAAAAATGAACACCCA‑AAAGGGAGtttt                                 >  2:1468298/1‑151 (MQ=9)
                                                                              ggCCCCCGCAACCAA‑TC‑AAATATGATGAAGTAAAATCAGTACGGTGAAGAGGGGTGGAGAAGCCTCGTAGCTCGTCGGGCTGATAACACGAAGGAAGACGGTTCAAATCCGGCCCACGCAACCAAATATTGAACACCCT‑AACGGGTGattt                                 >  2:511592/1‑151 (MQ=255)
                                                                               ccgcacGCAACCAATTA‑AAATTTGATCACGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGtttt                                 <  8:1198153/145‑1 (MQ=11)
                                                                                cccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGtttttt                               >  8:1603453/1‑151 (MQ=255)
                                                                                 ccccGCAACCAG‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGttttttt                              >  8:1366869/1‑151 (MQ=255)
                                                                                 ccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGttttttt                              >  7:431682/1‑151 (MQ=255)
                                                                                 ccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGttttttt                              >  7:1465922/1‑151 (MQ=255)
                                                                                 ccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGttttttt                              >  6:352846/1‑151 (MQ=255)
                                                                                 ccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGttttttt                              >  4:134283/1‑151 (MQ=255)
                                                                                  cccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTg                             >  5:322504/1‑151 (MQ=255)
                                                                                   ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGt                            >  3:388912/1‑151 (MQ=255)
                                                                                   ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGt                            >  1:1299874/1‑151 (MQ=255)
                                                                                   ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACCT‑AACGGGTGTTTTTTTGt                            >  1:1308214/1‑151 (MQ=255)
                                                                                    cGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGtt                           >  4:573752/1‑151 (MQ=255)
                                                                                    cGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGtt                           >  4:533458/1‑151 (MQ=255)
                                                                                     gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGtt‑t                         >  2:235201/1‑151 (MQ=255)
                                                                                      cAACCAATTA‑AAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACAACCA‑AAAGGGTCttttagatcgc                          >  4:1199125/1‑143 (MQ=11)
                                                                                      cAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGtt‑tg                        >  1:1445682/1‑150 (MQ=255)
                                                                                       aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTATCAACCA‑AAACAGGCTTTTTTTGTT‑TCt                       >  2:1197101/1‑151 (MQ=11)
                                                                                       aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACACCAA‑AAAAGGTGATTTTTTGTT‑TCt                       >  7:511694/1‑151 (MQ=11)
                                                                                       aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAACAACCT‑AAAGGGGGTTTTTTTTTT‑TCt                       >  4:1269155/1‑151 (MQ=11)
                                                                                       aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGCGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCt                       >  2:615039/1‑151 (MQ=255)
                                                                                       aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCt                       >  7:1200538/1‑151 (MQ=255)
                                                                                       aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCt                       >  7:1501115/1‑151 (MQ=255)
                                                                                       aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCt                       >  3:1670728/1‑151 (MQ=255)
                                                                                       aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCt                       >  3:1703451/1‑151 (MQ=255)
                                                                                       aaCCAA‑TC‑AAATTTCATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCt                       >  4:1703536/1‑151 (MQ=255)
                                                                                         ccAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTgg                     >  4:898148/1‑151 (MQ=255)
                                                                                         ccAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTAGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTgg                     >  7:22030/1‑151 (MQ=255)
                                                                                         ccAA‑TC‑AAAGTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTGTTTTTGTT‑TCTgg                     >  4:121896/1‑151 (MQ=255)
                                                                                         accaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACAA‑ATAGAGTGTTTTTTTGTT‑ACTg                      >  5:1813902/9‑151 (MQ=11)
                                                                                         accaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAATTAACAACCA‑AAAGGCTGTTTTTTTGTT‑Tc                        >  7:1614745/9‑149 (MQ=11)
                                                                                          ccaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AAAGGGTGTTTTGTTGTT‑GCTgg                     >  5:1184981/8‑151 (MQ=14)
                                                                                          cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGt                    >  3:1436169/1‑151 (MQ=255)
                                                                                          cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGt                    >  4:1497943/1‑151 (MQ=255)
                                                                                          cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGt                    >  5:66628/1‑151 (MQ=255)
                                                                                          cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGt                    >  1:575362/1‑151 (MQ=255)
                                                                                          cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCAGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGt                    >  1:429193/1‑151 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCCACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   >  5:790893/1‑151 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtg                   >  4:329287/1‑150 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   >  1:381067/1‑151 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   >  2:1058081/1‑151 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   >  8:507212/1‑151 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   >  4:372196/1‑151 (MQ=255)
                                                                                           aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   >  2:1792700/1‑151 (MQ=255)
                                                                                            aataaaaaTTTGATCACG‑AAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtc                   <  8:1268171/146‑1 (MQ=255)
                                                                                            a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑ACCGGGTGTTTTTTTGTT‑TCTGGtgt                  >  3:971840/1‑149 (MQ=255)
                                                                                            a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGtct                  >  4:492784/1‑151 (MQ=255)
                                                                                             attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACGCT‑CACGGGGGTGTTGTTGGT‑TGTGGtgt                  >  1:477441/5‑149 (MQ=11)
                                                                                             attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑GAACCGTGTGTTCTTGTT‑TCTGGtct                  >  8:474320/5‑151 (MQ=14)
                                                                                             attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACCT‑TACGCGTGTTTTTTTGTT‑TCGGGtct                  >  6:1690437/5‑151 (MQ=14)
                                                                                              ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AAAGCGTGTTTTTTTTTT‑TCTGGtctc                 >  2:1114531/4‑151 (MQ=14)
                                                                                              ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTGTACAACAT‑ATCCGGTGTTTTTTTGTT‑TCTGGtctc                 >  5:362396/4‑151 (MQ=14)
                                                                                              ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGAACAACCT‑AACGGGTGTTTTTTTTTT‑TCAGGtctc                 >  2:924293/4‑151 (MQ=14)
                                                                                                 aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTccc               >  7:1474782/1‑151 (MQ=255)
                                                                                                 aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTccc               >  4:300553/1‑151 (MQ=255)
                                                                                                 aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTccc               >  5:975404/1‑151 (MQ=255)
                                                                                                 aaaTTTGATGAAGT‑AGAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑ATAGGGTGTGTTTTTGTT‑TGTGGTCTccc               >  8:743739/1‑150 (MQ=17)
                                                                                                 aaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGCTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACCT‑AAAAGGTGATTTTTTGTT‑TCAGGTCTccc               >  7:837163/1‑150 (MQ=14)
                                                                                                  aaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTccc               >  1:1557834/1‑150 (MQ=255)
                                                                                                  aaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCA‑AACGGCTGTTTTTTTGTT‑TCTGGTCTCCCac             >  1:706462/1‑150 (MQ=255)
                                                                                                   aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCAt             >  6:1175060/1‑151 (MQ=255)
                                                                                                   aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCAt             >  5:774731/1‑151 (MQ=255)
                                                                                                   aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCAt             >  1:1226225/1‑151 (MQ=255)
                                                                                                   aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGCGTGTTTTTTTGTT‑TCTGGTCTCCCAt             >  4:1479366/1‑151 (MQ=255)
                                                                                                   aTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACACCCT‑AAATGGTCTTTTTTTGTT‑TCTGGTCTCCCAt             >  1:825706/1‑150 (MQ=17)
                                                                                                    tttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCAt             >  2:812701/1‑150 (MQ=255)
                                                                                                    tttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACACCCT‑CTCCGGGGTTTTTTTGGT‑GCGGGTCTGCCATa            >  1:1669343/1‑150 (MQ=14)
                                                                                                     ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATa            >  7:195038/1‑150 (MQ=255)
                                                                                                     atgatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACAA‑AAAGGGTCTTTTTTTGTT‑TCTGGTCTCCCATaa           >  1:330183/2‑150 (MQ=17)
                                                                                                       gatgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATaaa          >  5:429536/1‑150 (MQ=255)
                                                                                                       gatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCA‑AAAAAGTGTTTTTTTTTA‑TCTGGTCTCCCATaaaa         >  4:868516/1‑150 (MQ=17)
                                                                                                        atgaAGTAAAAGCAGTACGGTGATGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATaaaa         >  5:265558/1‑150 (MQ=255)
                                                                                                        atgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATaaaa         >  7:62058/1‑150 (MQ=255)
                                                                                                        atgaAGTAAAAGCAGTACGGTGACGCGGGCTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCA‑AACGGGTGTTTTTTTGTT‑ACTGGTCTCCAATaaaa         >  7:1770696/1‑150 (MQ=255)
                                                                                                        atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTCAACGGG‑GTGTTGTTGGT‑TCTGGTGTCCCATaaaatc       >  6:51738/1‑149 (MQ=14)
                                                                                                        atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑GAAGGGGGTTTTTTTGTT‑TGTGGTCTCCCCGaaaaac       >  1:554008/1‑150 (MQ=17)
                                                                                                        atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAATGAACACCCA‑AACGGCTGAGTTGTTGTT‑ACGGGTCTCCCATaaaaa        >  7:178563/1‑150 (MQ=14)
                                                                                                         tgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCAtaataa        >  7:936681/1‑150 (MQ=255)
                                                                                                         tgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCAT‑AACGCGTGTTTTTTTGTT‑TCTGGTCTCCAATaaaaa        >  7:980343/1‑149 (MQ=255)
                                                                                                          gaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATaaaaa        >  6:1692826/1‑149 (MQ=255)
                                                                                                          gaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACTGGTGTTTTTTTGTA‑TCTGGTGTCCCATAAAAAAgc     >  2:438834/1‑151 (MQ=255)
                                                                                                           aaGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAgc     >  5:1239455/1‑151 (MQ=255)
                                                                                                            aagaaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACAAATTATTGAACACCCT‑CAC‑GGAGCAGTTATGTTATCAGGGCTCCCATAAAAAAgcc    >  6:1323370/4‑150 (MQ=14)
                                                                                                            aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAgcg    >  1:21716/1‑151 (MQ=255)
                                                                                                            aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAgcg    >  3:93558/1‑151 (MQ=255)
                                                                                                            aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAgcg    >  4:1590626/1‑151 (MQ=255)
                                                                                                            aGTAAAAGCAGAACGGTGACCCCGGGTGCAGCAGCCTGGTAGCTCGTCGGGCTCAAAACCCGAACGTCCACGCGACAAATCCTGCCCCCGCAACCAATTATTGAACACCCT‑AACGGCTGTTTTTTTGAT‑TCTCGTCTCCCATAAAAAAgcc    >  5:185116/1‑150 (MQ=21)
                                                                                                             gTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAgcgc   >  8:1814202/1‑151 (MQ=255)
                                                                                                             gTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATACGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAgcgc   >  6:1797905/1‑151 (MQ=255)
                                                                                                              tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAGCGcc  >  1:25442/1‑151 (MQ=255)
                                                                                                               aaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAGCGcc  <  8:134192/150‑1 (MQ=255)
                                                                                                               aaaaGCAGTACGGTCACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGCTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACCCCAGTTTTTTTGTT‑TCTGCTCTCCCATAAAAAAGCGcc  >  4:498392/1‑150 (MQ=18)
                                                                                                               aaaaGCAATACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAGCGcc  >  1:655453/1‑150 (MQ=255)
                                                                                                               |                                                                                                                                                       
AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCT‑AACGGGTGTTTTTTTGTT‑TCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947482‑2947740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑