Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,270,151 | 0 | A | C | 25.5% | 205.1 / 40.6 | 212 | intergenic (+549/+474) | yhaC/garK | pentapetide repeats‑related protein/glycerate kinase I |
Reads supporting (aligned to +/- strand): ref base A (109/43); new base C (52/0); total (167/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.16e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 215 total aligned reads displayed.
CGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACC > NC_000913/3270003‑3270301 | gatgttttctttTGGGTAAAGTCTTTTGGTCATTGATTCTTTTTTGATCTACTCAAAAATCTTAAACCCGCCGTATCGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGt‑cat < 4:1243074/145‑1 (MQ=0) gtttctttTGCGTATAGTGTCGTCGACATTCATTTATATTTATTCCCTACAATAAGCTAATACGATCTGTAACGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGt‑cattcat < 4:401992/149‑1 (MQ=2) ttctttTGTGTCTCGTGTCCTGCCCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCt < 6:1823963/150‑1 (MQ=11) tctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCGGCCCCTCCAAAACCAAAAACCCGCCGAAGCCGGGTTTTACGTAAACCAGGTGAAACTGACCGATAAACAGCGTTCTTTTGGGTATAGCGTAGTGGGACCT‑CATTCATCttt > 1:112846/1‑151 (MQ=11) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGT‑CATTCATATTGGTGCGCCGCCAAAAGCAAAAAc > 1:1046465/1‑151 (MQ=11) cAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGCGTCGTGGCCAGT‑CAATCAAAGTTTTACCCCCACAAAACCAAAAAcc > 8:924380/1‑151 (MQ=11) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGGATTCTTTTGGGTATAGAGTCGTGGAGAGT‑CCGTCATGATTTTGCAGCTTCAAAATCACAAAcccc > 1:1681349/1‑150 (MQ=11) tcattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGGGTTCTTTTGGGTATAGCGTAGGGGACAGTCCATCAAACTTTGTCCCCCT‑CAAAAACAAAAACccgc > 8:1165376/1‑151 (MQ=11) attcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGAGATATTAAGTAAAACATGTTAAACTTACCGATAAGCCTATTTCTTTATGTTATAGCGTCGTGGAAAAT‑AATTAAAAATTATGGCCCTCCAAAAGCAAAAACccgccg > 2:545934/1‑151 (MQ=2) catCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGCGTCGTGGAGAGG‑CAATCAATATTTAACACCCACAAAAACAAAAACCCGCCG‑a > 5:1510149/1‑149 (MQ=11) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGG‑CATTCATTTTAATGCCCCGGCCAAACCAAAAACccgccggatgc > 4:1131636/1‑146 (MQ=11) cctatCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCTTTTTTTTACGTAACCCAGGTTAAACTGAACGATAAGCCGATTTCTTTTGGGTATAGCGTCGTTGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑g < 1:543220/147‑1 (MQ=11) cTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCGAGT‑CAGTCAGGGTGGTGCGCCGACAACACCAAAAACCCGCCG‑CAG‑C‑ggggtg > 8:155850/1‑148 (MQ=11) tGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGAGTCGTGGAAAGT‑CAATCATAATGTAACTCCAGCAAAACCAAAAACCCGCCG‑CAgacggtgtt > 7:1541000/1‑143 (MQ=11) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTGTTGGGTATAGCGTCGGGGCCAGG‑CATTCAGGGGTGCGCGCCGGCAAAACCACAAACCCGCAG‑CAG‑C‑ggggtggt > 1:1304512/1‑146 (MQ=11) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGCCCGATAAGCCGCTTTCTTTTGGGGATAGCGTGGTGGCAAGG‑CAATGAAAGTGGTGCACCGCCAAAAGCAAAAACCCGCCG‑CAG‑C‑GGGgttgttc > 4:1491394/1‑147 (MQ=11) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGTGGACAGG‑CATTCATAATACTGCACCAACAAAAACAAAAACccgcatcagaccgtgtttt > 2:386671/1‑135 (MQ=11) ccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGG‑CATTCATCGTTGGGCCCCGGCAAAAGCAAAAACCCGCCG‑CAG‑C‑gggggttttcc > 1:1357174/1‑143 (MQ=11) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CAATCATGGTTATGCCCCGCCAAAAGCAAAAACCCGCCG‑CAG‑C‑GGGTTTTTTCGtta > 5:287373/1‑148 (MQ=11) aaaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGG‑CATTCATATTTAGGCACCTACAAAAACAAAAACCCGCAG‑AAGAC‑GGGTTTTTACGaaat > 5:1771858/1‑150 (MQ=11) aaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCGTGGCCAGG‑CAGTCAACGTTCGGCCCCGGCAACAGCAAAAACCCGCCG‑CAG‑C‑GGGGGTGTACGttattc > 8:1818233/1‑145 (MQ=11) aGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCGAGT‑CATTGAAGTTTGTGCGCCGCCAAAAACAAAAACCCGCCG‑AAG‑C‑gggggtgtaccgaaatc > 4:664444/1‑135 (MQ=11) aaaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGT‑CAATCAAAATTTAGCACCAACAAAAACAAAAACCCCCAG‑AAG‑CAGGGTTATTAcaaaaaaaagagc > 4:97759/1‑139 (MQ=2) aaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CCTTCATCGTTCAGCCCCTCCAAAAGCAAAAAACCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGa > 1:996910/1‑150 (MQ=255) aaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CATTCATGTTTGGGCGCCGGCAAAAGCAAAAACCCGCCG‑CAG‑C‑GCGGGTTTTCGGTAATCACGTGaa > 1:799236/1‑150 (MQ=11) aCCCGCCGAAGCGGGTTTTTACGTAAAACAGTTGAAACTGACCGATAAGCCGCTTTCTTTTGGTTATAGCGTCGTGGACAGT‑CATTCATCTTTCTTCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAAc < 2:1253462/151‑1 (MQ=9) cccGCCGACGCGGGTTTTTACGTAAACCAGGTGAACCAGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CCTTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACt < 6:1415720/151‑1 (MQ=255) cccGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCGTGGCCAGG‑CGTTCATCTTTGTGCCCCTCCAAAAGCAAAAAACCCCCG‑CAG‑C‑GGGGGTTTACGGTAATCAGGTGCAACt > 6:493516/1‑151 (MQ=11) cgccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGT‑CATTCATATTTATGCACCAACAAAAACAAAAACCCGCAG‑AAG‑A‑GGGGTATTAACTAAATCAAGTGAAACtt > 7:209926/1‑149 (MQ=11) gccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCACT‑AAATGATGTTTGAGCCCCACCAAAACCAAAAACCCGCCGCACC‑C‑GGGTTTTTCCG‑AAATAACGTGaaaaagac > 8:1032367/1‑146 (MQ=2) ccgACGCGGGTTTGTACGTAAAGCCCGGGCAAGTGACCGCTCAGGCGCGCTCTTTTGCGCTTAGGGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGAcc < 8:1476604/151‑1 (MQ=11) cgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTAGTGGAAAGT‑CATTCATAATTATGCCCCAACAAAAACAAAAACCCGCCG‑AAG‑A‑GGGTTTTTATGTAAATAACGTGAAACTTAccc > 2:1412403/1‑150 (MQ=11) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CATTCATGTTTGGGCCCCTCCAAAACCAAAAACCCGCCG‑AAG‑C‑CGGTTTTTTCGTAAATCAGGTGAAAATTACCGAt > 3:229955/1‑151 (MQ=11) aGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CAATCATGATTATGCGCCGCCAAAACCAAAAACCCGCCG‑CAGAC‑CGGTTGTAAC‑TAAATCACGCGAAACTGACCGAt > 8:1331587/1‑150 (MQ=11) gCGGGTTTTTACGTAAAACAGGTGAAACTGAACTATAATTCTCTTTCTTTTGCGTATAGCGTCGTGTACAGT‑CATTCATCTTTCTGACCATGAATATGTAAATATCAGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa < 4:1616450/151‑1 (MQ=11) cGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑GATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑CAG‑CGGGGTGTTTCCGT‑AATCACGGGAAACttgccctta > 8:392583/1‑141 (MQ=11) cGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCAAAGTTAAACGCCAACAAAAACAAAAACCCGCCG‑AAG‑G‑CGGTTATTAAGTTAATCACGGGaaaattcgccataa > 7:387730/1‑139 (MQ=2) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCGAGT‑CCTTCATCGTGCGGCCCCTGCAAAAACAAAAACCCGCCG‑AAG‑G‑GCGGTGTTAAGTAAATCACGGGAAACTTGCCGATAAGc > 1:1590892/1‑151 (MQ=11) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGG‑CATTCATGTTTCTGCCCCTACAAAACCAAAAACCCGCCG‑CAG‑C‑CGGTGTTTAAGTAAATCACGTGAAACTGCCCGATAAGcc > 6:1529591/1‑151 (MQ=11) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCCTCGTGGAAAGT‑CATTCATAATAAAGCACCAACAAAAACACAAACCCGCAG‑CAG‑A‑CCGGTATTACGAAAATCAACGAAAACTGAACAAAAAGcc > 7:902988/1‑151 (MQ=2) gTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CATTCATGTTTGAGCCCCGACAAAAGCAAAAACCCGCCG‑AAG‑C‑CGGTTTTTACGTAAATCAGGTGAAAAACACCGATAAcccc > 3:171807/1‑150 (MQ=11) ttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCTTGGCAAGT‑CATTCAAATTTAAACACCAACAAAAACAAAAACCCGCAG‑AAG‑C‑ACGTTTTTAAGTAAATAACGTGAAAATGACAGATAATCAggggt > 2:733124/1‑149 (MQ=2) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGT‑CATTCATCTTTGGGCCCCGCCAAAAACAAAAACCCGCCG‑CAG‑C‑CGGGTTTTACCTTAATCAGGTGAAACTGGGCGATAAGCCGGGTTgtgt > 8:1174323/1‑151 (MQ=14) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGCGTCGTGGCCAGT‑CATGCATGGTTCTGCCCCCCCAAAAGCAAAAACCAGCCG‑CAG‑C‑GGGTTTTTACGTAACTCAGGTGCAACTGCCCCCTAATCCGGGTTCTgg > 1:56243/1‑150 (MQ=14) tAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGG‑CATTCATAGTTCGGCCCCACCAAAAGCAAAAACCCGCCG‑CAG‑C‑GGGGGGTTTCGGAAATGAGGTGAAAGTGCCCCATAAGCCGGGTTCTGtg > 3:614085/1‑150 (MQ=14) aaaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGT‑CAATCATGTTTGGGCACCGACAAAAGCAAAAACCCGCCG‑CAG‑C‑CGGGTTTTTCGTAAATGACGGGCAAATTCCCGATCAGCCGGGTTGTGTCg > 4:471513/1‑151 (MQ=9) cAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CATTCATGTTTGGGCCCCGCCAAAAGCAAAAACCCGCCG‑CAG‑C‑GCGTTTTTAAGTAAATCAGGTGCAACTTCCCGATAATCCGGGTTGTGTTGTggg > 6:788682/1‑150 (MQ=14) cAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGT‑CAATCATAATTGACCCCCGGCAAAAACAAAAACCCGCAG‑CAC‑C‑CCGTTTTTCCGTAAAACACGTGACACGGACCGTAACCCCGGGTTATCTCGTgg > 3:1166538/1‑150 (MQ=2) cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGttt < 7:1401669/103‑1 (MQ=17) aGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CAATCAAATTTATGCCCCAACAAAAACAAAAACCCGCCG‑CAG‑C‑CCGGTTTTAAGATAATCAAGTGAAACATCCCCATAAGCAGGGTTATGGCGTGGa > 4:265837/1‑150 (MQ=9) aGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGT‑CATTCATGTTTCTGCGCCAACAAAACCAAAAACCCGCAG‑CAG‑A‑GCGGTTTTAACTAAATCAGGTGCAAATTGCCGATAATCCGGGTTGTGtggtggtg > 5:1280157/1‑149 (MQ=9) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CCTTCATATTTGGGCCCCAACAAAAGCAAAAACCCGCCG‑CAG‑G‑CGGGTTTTACGTAAATCAGGTGCAACAGACCGCAAAGCCCGGGTCtttaggggcccgt > 3:1276735/1‑139 (MQ=2) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATATTTGAGCCCCAACAAAAACAAAAACCCCCCG‑AAG‑A‑CGGGTTTTAAGTAAATGAGGTGAAAATGAACGATAATCAGGGTTATGTTGTGGGCAGt > 5:1814901/1‑151 (MQ=14) gAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTAATCTTTGTGCCCCAACAAAACCAAAAACCCGCCG‑CAG‑C‑CCGTTTTTACGTAAATCAGGTGAAACTTACCCATAAGCCGGGTTCTGTGGTGGACAGtc > 1:1507295/1‑151 (MQ=14) aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGCGAGT‑CATTCAAATTTTAGCGCCATCAAAAACAAAAACCCGCAG‑CAG‑G‑GGGGTTTTTAGTTAATGACGGGAAAATTGCCCATAATCCGGGTTgtgttttggtttcggt > 3:1234468/1‑139 (MQ=2) aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGT‑CATTCATCGTTGTGCCCCTCCAAAAGCAAAAACCCGCCG‑CAG‑A‑CGGTTTTTACGTAAATCAGGGGAAACTGCCCCATAATCCGGGTTCTGTCGTgggtcgtc > 3:997992/1‑144 (MQ=14) aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTGTGCCCCTACAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGCCCGATAAGCCGGGTTCTGTCGTGGACAGtc > 2:1073061/1‑150 (MQ=255) aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCGCCG‑CAG‑C‑CGGGTTTTAAGTAAATCAGGTGAAAATGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt > 1:294613/1‑151 (MQ=17) aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCAACAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTAAGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTATGTAGTGGaacgtgatt > 5:118269/1‑143 (MQ=14) tGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAAT‑CATTAATCATTATGCCACACCAAAAGAAAAAACAAGCCG‑AAA‑C‑CGGTTTTTAAGTAAAAAAGGTTAAAAAGAAAGATAATACGGGTTGTGTGGGGGagagggtgtgg > 4:131368/1‑144 (MQ=2) gACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑A‑GGGTTTTTACGTAAATCAGGTTAAACTGAACCATAAGCCGGGTTATGTCGTGGAAAGtaattca > 6:159731/1‑150 (MQ=14) ccGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGCCCGATAAGCCGGGTTCTGTCGTGGACCGTGATTCATCt > 6:951663/1‑151 (MQ=255) ccGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGGTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt > 1:235185/1‑151 (MQ=255) cGATAAGCCGCTTTCTTTTTTTTATTTTTTTGATGAGATT‑AATTCATATTTCTACACTTTATAAATCAAAATTTCGCTT‑AAG‑C‑TGGTTTTTACGAAATTCAGGTTAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 7:482505/151‑1 (MQ=255) catccgCCGCTTTCTTTTGTGTATATTTTTTTCGAAAGT‑CTTTCATCTTTCTGCCCTTCCATATTGAAAACCCCGTGT‑ACG‑T‑TGTTTTTTATGTTCATATCTTTAAACTGACCGATAAGCCGGTTTCTGTCGTGGACAGTCATTCATCTAg < 7:1116308/146‑1 (MQ=255) aTAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg > 6:1310743/1‑151 (MQ=255) aaGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGG‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGGCAGGGATTCATCTAGGcc > 6:593241/1‑151 (MQ=255) gCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGG‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCCCCG‑CAG‑C‑GGGGTTTTACGTAAATCAGGTGAAACTGCCCCATAAGCCGGGTTCTGTGGGGGTCCGTCATTAATCTAGGcccc > 8:742924/1‑149 (MQ=14) ccGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGCCCGATAATCCGGGTTCTGTAGTGGACAGTCATTCATCTAGGCCAGc > 6:721662/1‑151 (MQ=255) ccGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATATTTCTGACCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTAAGTAAATAAGGTGAAACAGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGGCAGc > 2:587906/1‑151 (MQ=18) ccGCTCTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTTCCCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc > 6:8749/1‑151 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑CAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc > 1:446016/1‑150 (MQ=255) tttctttTGGGTATAGCGTCGTGGACAGT‑CATTCATATTTCTGCCCCTACAAAAGCAAAAACCCGACC‑AAG‑C‑GGGGTTTTACGTAAATCAGGTGAAACTTACCGATAATCCGGGTTATGTAGTTGACAGTCATTAATCTAGGCCAGCAAt > 2:173274/1‑150 (MQ=255) ttctttTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATc < 8:252249/150‑1 (MQ=255) ctttTGGGTATAGCGTCGTGGACAGT‑CATTGTTCTTTCTGCCGCAGCAATATCAAAATACCGCCG‑AAA‑C‑GCGGTTTTAAGTAAATGAGGTGTAACTGACCGGTATGGCGGGTTGTGTGGTGGGCAGTGATTTATCTACGCCAGCAAttgat > 2:1799862/1‑147 (MQ=255) tttgtttatattgtcttGGACATT‑CATTCATCTTTCTTCCCATCCAAAATCAAAAACCCTCCG‑AAG‑C‑GGGTTTTTACGTTATTAAGGTTAATCTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc < 4:994013/138‑1 (MQ=18) tttGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc > 4:1637617/1‑150 (MQ=255) tttGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGCCCGCAATCgaga > 5:66813/1‑147 (MQ=255) ttggttttagctttttGGATATT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCa < 5:771273/135‑1 (MQ=21) ggTATAGCGTCGTGGACAGT‑CATTCATGTTTGTGCCCCGCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGGAAATGAGGTGAAACTGACCGATAAGGCGGGTTCTGTCGTGGACAGTCATTAATCTAGGCCCGCAAACGCTCCCTgg > 7:1234168/1‑151 (MQ=18) ggTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTgg > 6:1040901/1‑151 (MQ=255) aGCGGCGTGTACACT‑CATTCTTCTTTCTGCCCCTCCAAAAGCTAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCaa < 8:506598/151‑1 (MQ=255) cgtcctGGAGAGT‑CATTCAGCTATCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc < 6:301731/151‑1 (MQ=255) gtcgtGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc > 8:1419446/1‑150 (MQ=255) gtcgtGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc > 4:818279/1‑150 (MQ=255) gtcgtGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc > 8:1057069/1‑150 (MQ=255) ggcgtCGACAGG‑CAATCATCATTCAGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagca < 8:720259/149‑1 (MQ=25) agtGGATTGT‑GATTGATCTTTCTGCACCTCCAAAAGCAAAAAGCCGCCG‑AAG‑G‑GGGTTTTTTCGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTGAagcag < 4:507442/149‑1 (MQ=25) acctgACAGT‑CATTCATTTTTCTCCACCTCCAAAAGCAAAAACCCGCTG‑ATG‑C‑GTTTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagcag < 5:1409437/146‑1 (MQ=25) gtGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa < 3:1801856/88‑1 (MQ=33) gtGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGcc > 8:1704288/1‑151 (MQ=255) gtGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGcc > 2:1082769/1‑151 (MQ=255) tGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt > 7:551878/1‑151 (MQ=255) tGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt > 8:525041/1‑151 (MQ=255) ggACAGT‑CATTCATCTTTCTTCCCCTCCAATTTCAAAATCCCGCAG‑TAG‑C‑TTGTTTTTACTTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAACAGCCTa < 4:686937/151‑1 (MQ=25) ggACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt > 5:1021799/1‑150 (MQ=255) ggACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt > 5:216275/1‑150 (MQ=255) ggACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt > 1:633210/1‑150 (MQ=255) ggACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt > 2:1465977/1‑150 (MQ=255) ggACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTCAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGACAGCAAACGCTCACTGGCTCAAGCAGCCt > 6:1343640/1‑150 (MQ=255) | CGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGT‑CATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAG‑C‑GGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACC > NC_000913/3270003‑3270301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |