| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4542682 = | 272 (0.540) | 318 (0.670) | 185/282 | 1.0 | 55.7% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 250 (0.530) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
Only 100 of 607 total aligned reads displayed.
TCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCT > NC_000913/4542847‑4543146 | tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑t > 5:473134/1‑151 (MQ=255) cGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACAGCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAACCTCAAAAAGTTTGTCCGCGATGCTTTCATCTATGAGTCAAAATGGCCCCaaagg > 8:1417923/1‑149 (MQ=255) cATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTc > 1:493353/1‑150 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCtt > 7:1730742/1‑151 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAACTTTGTCCGCGATCCTATCCTCTATGAGTCAAAATCGACCAAAA‑ACTTTCATCt > 5:316454/1‑150 (MQ=255) tCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCt < 5:1693376/149‑1 (MQ=255) ggaggtgatgtgaaattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttttgatatggacagtttggccccaaA‑TGTTTCATCTTTTg < 8:1820703‑M2/15‑1 (MQ=255) ggaggtgatgtgaaattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTg > 8:593417‑M2/137‑151 (MQ=255) gaggtgatgtgaaattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccacaaA‑TGTTTCATCTTTTgg > 8:476543‑M2/136‑151 (MQ=255) cATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATATAGATAACAATAGAATATTAAGCCAACAAATAAACTG‑AAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTggg < 1:1718869/150‑1 (MQ=255) gttatgtgaaattaatttacaatagaaattatttacatatcaaacagttagatgctttttgtggttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTgggg < 1:1668713‑M2/18‑1 (MQ=255) tgtgaaattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGaaa > 4:1939418‑M2/129‑150 (MQ=255) tctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGaaa < 1:1163753/150‑1 (MQ=255) gtgaaattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAAc > 4:632301‑M2/128‑151 (MQ=255) gaaattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACt < 7:818166‑M2/25‑1 (MQ=255) aattaatttacaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACtgtg < 2:362726‑M2/28‑1 (MQ=255) aaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAgt > 4:1588296/1‑151 (MQ=255) caccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTg < 7:424140/151‑1 (MQ=255) acaatagaaatactttacatatcaaacaggtagatgctttttggcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTgg < 4:785155‑M2/37‑1 (MQ=255) acaatagaaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTg < 7:1957118‑M2/36‑1 (MQ=255) aaataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCa > 1:1337358‑M2/108‑150 (MQ=255) ataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCaaa > 8:1874168‑M2/106‑150 (MQ=255) ataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAAc < 2:649993‑M2/46‑1 (MQ=255) ataatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAAc > 2:953711‑M2/106‑151 (MQ=255) taatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACt > 4:888512‑M2/105‑151 (MQ=255) aatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACt < 5:1049021‑M2/47‑1 (MQ=255) aatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTc < 5:1483087‑M2/48‑1 (MQ=255) aatttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTc < 3:1244217‑M2/48‑1 (MQ=255) tttacatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGt > 2:769485‑M2/102‑151 (MQ=255) aaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGttt > 7:542247/1‑151 (MQ=255) acatatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGttt < 6:122499‑M2/52‑1 (MQ=255) aCATCTATAAATAAAGATAACAATAGTATATTAAGCCAACAAATAAACTGAAAATGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTa < 1:283464/151‑1 (MQ=255) catatcaaacagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTac < 6:178724‑M2/54‑1 (MQ=255) cATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTac < 3:971238/151‑1 (MQ=255) cATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTac > 4:1111995/1‑151 (MQ=255) cATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTac < 1:98945/151‑1 (MQ=255) ataaataaAGATAACAATAGAATATTACGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac > 6:1085702/1‑151 (MQ=255) ataaataaAGATAACAATAGAATATTAAGCCAACAAATAAACTGAGAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac > 2:1970121/1‑151 (MQ=255) ataaataaAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTTGCAGTCAAACTCGTTTacaa < 4:1185548/148‑1 (MQ=255) ataaataaAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaa < 6:1429705/149‑1 (MQ=255) taaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac > 4:1855167/1‑150 (MQ=255) acagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaa > 4:1330448‑M2/90‑150 (MQ=255) acagttagatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaa > 6:63019‑M2/90‑150 (MQ=255) agatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTa < 7:962223‑M2/67‑1 (MQ=255) agatgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTAc > 1:1053225‑M2/84‑151 (MQ=255) atgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTAcac > 5:879508‑M2/82‑150 (MQ=255) atgctttttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACa < 8:327392‑M2/69‑1 (MQ=255) cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGAGATGATTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCACTGTTGGAAGTCAAAATCGTATACAAAACAAAGTGTAAAGAAc > 5:1441711/1‑151 (MQ=255) tttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGa < 4:248294‑M2/75‑1 (MQ=255) tttgtcgttttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGa < 2:528703‑M2/75‑1 (MQ=255) aaTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTg < 3:80060/150‑1 (MQ=255) ttttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATg < 6:409133‑M2/84‑1 (MQ=255) aGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTc < 4:1454954/151‑1 (MQ=255) ttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTc < 6:720322‑M2/86‑1 (MQ=255) ttaatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCg > 4:55131‑M2/65‑151 (MQ=255) gCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCg < 6:1655164/151‑1 (MQ=255) ccAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCg > 2:860809/1‑150 (MQ=255) ccAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGa < 2:1853230/151‑1 (MQ=255) aatatttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAt > 3:1697050‑M2/63‑151 (MQ=255) atatttttatgcttgagaaaaaatacgtaactattttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAtt < 2:1101322‑M2/90‑1 (MQ=255) caaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTa < 2:1486582/151‑1 (MQ=255) atttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTa < 3:1775395‑M2/92‑1 (MQ=255) aaaTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg < 3:1531547/151‑1 (MQ=255) ttttatgcttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAttt > 7:1330246‑M2/58‑148 (MQ=255) aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGa > 3:1074644/1‑150 (MQ=255) aCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCACAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAg < 7:1441843/151‑1 (MQ=255) gcttgataaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGt < 8:1096618‑M2/100‑1 (MQ=255) ttgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttt > 6:535052‑M2/50‑151 (MQ=255) gAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttt < 1:1857437/151‑1 (MQ=255) gAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttt > 6:937716/1‑151 (MQ=255) gAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTATTCCGGGAAAACTGTCCAGTGTTGCCAGTCAAACTCCTTTACAAAACAAACTGTACAGAACGACTGACCAAGTCGATTTAGAAATACttt > 5:1885284/1‑151 (MQ=255) tgagaaaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt < 5:1766760‑M2/101‑1 (MQ=255) aaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttttt < 3:536377/151‑1 (MQ=255) gTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTga > 6:786379/1‑150 (MQ=255) gTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGAAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCACATGTCGATTTAGAAATAGTTTTTTga > 7:1596307/1‑150 (MQ=255) aaaaatacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTga > 8:1721801‑M2/44‑150 (MQ=255) atacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTtgaaagt > 3:1384001‑M2/40‑149 (MQ=255) atacgtaacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaagga < 2:1667921‑M2/112‑1 (MQ=255) ccGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGCACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa > 7:279730/1‑150 (MQ=255) gcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc < 8:1636029/151‑1 (MQ=255) taacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACAACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc > 7:1039431‑M2/35‑150 (MQ=255) cgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca < 8:1219299/151‑1 (MQ=255) gATGCTTTCCTCTATTAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagcag < 7:1211451/151‑1 (MQ=255) aacttatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc > 3:1868764‑M2/34‑149 (MQ=255) gCTTTCCTCTATGAGTCAAAATGGCCCCAAATTTTTTAAAATTTTGGGGAAAAAAGTTGAATTGTTGGAATTAAAAGACTTTTACAAAACAATTTTTACAGAA‑GCCATCCCAAGTTCGTTTAAAAATAATTTTTTTTAAGGGAAAGAGCAt > 1:1483326/1‑151 (MQ=255) tatttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt < 4:374347‑M2/121‑1 (MQ=255) ttatgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaa < 6:1974221‑M2/124‑1 (MQ=255) ccTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaa < 5:1181539/150‑1 (MQ=255) atgatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAt > 8:694777‑M2/25‑151 (MQ=255) gatatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt < 1:379741‑M2/128‑1 (MQ=255) atatggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa < 6:1548408‑M2/130‑1 (MQ=255) atggacagtttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaa > 3:692069‑M2/20‑150 (MQ=255) aaTGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACACAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGc > 1:80438/1‑150 (MQ=255) ttggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGAGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAACTGTACAGAACGACTGCCCATGACGAATTAGAAATAGTATTTTCAAATGAAAGCACCATGAAAATTAAACCTCTCGCa > 1:616919‑M2/11‑150 (MQ=255) tggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAAt > 5:1309655‑M2/10‑151 (MQ=255) ggccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATc < 3:222356‑M2/143‑1 (MQ=255) ccccaaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgt < 3:377322‑M2/145‑1 (MQ=255) caaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGTCTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgttgt > 5:667702‑M2/4‑151 (MQ=255) aaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgttgtt < 3:1162060‑M2/149‑1 (MQ=255) aaA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgttgtt < 7:1878965‑M2/149‑1 (MQ=255) | TCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAA‑TGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTGTTCT > NC_000913/4542847‑4543146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |