BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1095502	NA (NA)	268 (0.530)	164/298	3.9	44.4%	noncoding (1/1258 nt)	IS3	repeat region
*	?	NC_000913	= 1199871	335 (0.660)	268 (0.530)	164/298	3.9	44.4%	coding (936/1128 nt)	intE	e14 prophage; putative integrase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 284 total aligned reads displayed.

CGTTCAGCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1095352‑1095502

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTTA  <  NC_000913/1199871‑1199722

gGTTCAGCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCA                                                                                                                                                        <  7:476821/150‑1

CGTTCAGCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGGTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCA                                                                                                                                                        <  4:493094/151‑1

 GTTCAGCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAA                                                                                                                                                       <  2:1697247/151‑1

     AGCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGA                                                                                                                                                   <  5:1789252/151‑1

      GCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAG                                                                                                                                                  <  5:108897/151‑1

            TTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTT                                                                                                                                            >  6:1591487/1‑151

              ccGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTA                                                                                                                                           <  7:591693/148‑1

              CAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTT                                                                                                                                            >  8:1864899/1‑149

              CAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTT                                                                                                                                            >  4:1757392/1‑149

               cGGGCTTCACTGCGAAATTCAGGCGAATGCTGGTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGGCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGC                                                                                                                                         <  3:1930686/150‑1

               AGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTAGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGC                                                                                                                                         <  2:321301/151‑1

                  GCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAG                                                                                                                                      <  1:1331142/151‑1

                    TTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGA                                                                                                                                     >  4:1600742/1‑150

                     TCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAA                                                                                                                                    <  6:856767/150‑1

                      CACTGCGAAATTCAGGCGCATGCTGTTTCCGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAAT                                                                                                                                   <  4:691239/150‑1

                      CACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATT                                                                                                                                  <  6:1309534/151‑1

                       ACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTG                                                                                                                                 >  3:590867/1‑151

                       ACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTG                                                                                                                                 <  6:1478490/151‑1

                          GCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGA                                                                                                                                <  1:660250/149‑1

                           CGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTG                                                                                                                             >  7:412812/1‑151

                            GAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGG                                                                                                                            >  8:69491/1‑151

                             AAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGG                                                                                                                           >  5:1321129/1‑151

                                   AGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGG                                                                                                                     >  2:376132/1‑151

                                      CGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTT                                                                                                                  >  1:1934686/1‑151

                                      CGAATGCTGTTTACGGGGATTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTT                                                                                                                  >  3:1160435/1‑151

                                       GAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTC                                                                                                                 >  3:69216/1‑151

                                       GAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTT                                                                                                                  >  3:815152/1‑150

                                           GCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAGGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCT                                                                                                             <  1:1674452/151‑1

                                            CTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTG                                                                                                            >  6:1162588/1‑151

                                            CTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTG                                                                                                            >  3:664975/1‑151

                                             TGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGC                                                                                                           >  2:1633444/1‑151

                                                 TACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGAC                                                                                                        >  7:872556/1‑150

                                                 TACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTCAGAGTTTACTCACTTAGCCGCGTGTCCACAATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGAC                                                                                                        >  7:1618675/1‑150

                                                   CGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATT                                                                                                     <  2:671088/151‑1

                                                    GGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTC                                                                                                    <  7:1715315/151‑1

                                                      GGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCTCTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCA                                                                                                  <  5:1596133/151‑1

                                                        TTTTTTACTGGTTGGTACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATG                                                                                                >  2:1546875/1‑151

                                                         TTTTTACT‑GTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGA                                                                                               <  1:1127637/150‑1

                                                           TTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGC                                                                                             >  1:1588247/1‑151

                                                            TTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGC                                                                                             <  6:1903637/150‑1

                                                            TTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGC                                                                                             <  7:1020769/150‑1

                                                            TTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGAAGAGGGTACACGTCCGACATTCCAgagga                                                                                             >  7:1331449/1‑145

                                                             TACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCA                                                                                            >  2:1687742/1‑150

                                                             TACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCA                                                                                            <  8:1090766/150‑1

                                                              ACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAA                                                                                           <  6:1841749/150‑1

                                                                TGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGG                                                                                        >  1:489527/1‑151

                                                                 GGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGT                                                                                       >  7:1201767/1‑151

                                                                 GGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGT                                                                                       <  1:1182341/151‑1

                                                                 GGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAG                                                                                         <  2:1078869/149‑1

                                                                  GTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTC                                                                                      <  7:67297/151‑1

                                                                  GTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTC                                                                                      >  8:535489/1‑151

                                                                    TGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTT                                                                                    >  4:905584/1‑151

                                                                      ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTT                                                                                   >  4:1040024/1‑150

                                                                      ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTT                                                                                   >  2:1289463/1‑150

                                                                      ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTT                                                                                   >  6:1779058/1‑150

                                                                        ACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTAT                                                                                 <  1:1875088/150‑1

                                                                           gagTTTGTCATGTGAGTCACCTCTGACGGAGAGTTTACGCACTTCGCCCCGTGTCCACTATTGCTGGGTAAGAGCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGCTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCT                                                                               <  6:1340258/146‑1

                                                                           GTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCT                                                                               <  3:1498565/149‑1

                                                                             TTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAAC                                                                           >  4:1497854/1‑151

                                                                               TTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACG                                                                          <  7:782765/150‑1

                                                                                 GTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCT                                                                       >  6:651576/1‑151

                                                                                 GTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCT                                                                       >  5:258099/1‑151

                                                                                 GTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTC                                                                        <  1:284182/150‑1

                                                                                   CATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTG                                                                      <  2:1009215/150‑1

                                                                                    ATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGT                                                                     >  3:1516586/1‑150

                                                                                         AGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAG                                                               <  5:533625/151‑1

                                                                                          GTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGA                                                              <  5:1509700/151‑1

                                                                                          GTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGA                                                              <  5:876647/151‑1

                                                                                            CACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAAC                                                            >  2:543924/1‑151

                                                                                            CACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAAC                                                            >  7:1942059/1‑151

                                                                                              CCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAG                                                          <  2:1965413/151‑1

                                                                                              CCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAG                                                          <  4:1298490/151‑1

                                                                                                 CTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGG                                                       >  4:1985218/1‑151

                                                                                                  TGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGT                                                      >  1:833273/1‑151

                                                                                                   GACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGG                                                        <  3:245437/148‑1

                                                                                                    ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTT                                                     >  3:455406/1‑150

                                                                                                    ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTT                                                     >  7:1777305/1‑150

                                                                                                        AGAGTTTACTCACTTAGCCGCGTGTCCACTATTGATGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATGTGAACGTCTGTATTAAGAACAGGGGTTAGAC                                                 >  1:1028611/1‑150

                                                                                                           GTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACAC                                             <  5:803038/151‑1

                                                                                                           GTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACAC                                             <  8:1195212/151‑1

                                                                                                             TTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACA                                            >  7:1426285/1‑150

                                                                                                               ACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAA                                         <  2:744728/151‑1

                                                                                                                   ACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTAGGTATAAAGAACAGTGGTTAGACACACAAAAACT                                      >  8:1792279/1‑150

                                                                                                                      TAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACT                                   <  5:998909/150‑1

                                                                                                                      TAGCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTAC                                    <  5:1426612/149‑1

                                                                                                                        GCCGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGG                                >  8:1328886/1‑151

                                                                                                                          CGCGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTC                              <  6:360835/151‑1

                                                                                                                            CGTGTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCAT                            <  6:217557/151‑1

                                                                                                                               GTCCACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAA                         <  6:803730/151‑1

                                                                                                                                   ACTATTGCTGGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACAC                     <  5:412673/151‑1

                                                                                                                                      tTTGCTGGGTAAGTTCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAA                   <  7:152422/149‑1

                                                                                                                                            GGGTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAA             <  3:1737882/150‑1

                                                                                                                                              GTAAGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACC          <  8:959671/151‑1

                                                                                                                                                 AGATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGAT       <  5:1459087/151‑1

                                                                                                                                                   ATCAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCG     >  3:1774006/1‑151

                                                                                                                                                     CAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTT   <  4:235716/151‑1

                                                                                                                                                      AAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTTA  <  3:1239935/151‑1

                                                                                                                                                      AAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTTA  <  2:221239/151‑1

                                                                                                                                                      AAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTT   >  2:950881/1‑150

                                                                                                                                                      AAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTT   >  7:1161810/1‑150

CGTTCAGCAAGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1095352‑1095502

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTTA  <  NC_000913/1199871‑1199722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.