New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1095502NA (NA)260 (0.470) 174/298 1.9 44.8% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 1199871 321 (0.580)coding (936/1128 nt) intE e14 prophage; putative integrase

Only 100 of 589 total aligned reads displayed.

ATAACGATCGGTTTGTTGTTGTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGTTAATCGCATTG  >  NC_000913/1199721‑1200021
                                                                                                                                                      |                                                                                                                                                      
aTAACGATCGGTTTGTTGTTGTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCt                                                                                                                                                        <  6:47464/151‑1 (MQ=255)
  aaCGATCGGTTTGTTGTTGTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtg                                                                                                                                                      <  5:1379243‑M2/151‑3 (MQ=255)
        cGGTTTGTTGTTGTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCATATAAAGACCTTTTCTCATGGAATGTCGCAGGTGAACCCTCTCCACAGTCAATTCTTGCTAAATCTCTCGCTTTACTaa                                                                                                                                                 >  6:1633030/1‑150 (MQ=255)
         gttttGTTGTGTTGTTTTTTGTCCAAGTAGTTTTTGTGTGTCTAACCCATGTTGTTTATACTGAAGTTCATATAAAGACCTTTGCTGATGGATTGTCGCAGGTGAACCGTCTCGCAAGTGAATTCTTTCTAATTGTATCGCTTTAGTaaat                                                                                                                                               <  3:1004983/149‑2 (MQ=255)
            ttgttgttgTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAAtt                                                                                                                                             <  6:682209/150‑1 (MQ=255)
            ttgttggtgTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAAtt                                                                                                                                             <  2:1294527/150‑1 (MQ=255)
              gttgttgtGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccag                                                                                                                                           >  6:1273022‑M2/1‑137 (MQ=255)
                   tgtgTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTGTACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTc                                                                                                                                      >  6:518087/1‑150 (MQ=255)
                     tgtTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtg                                                                                                                                   <  7:652371‑M2/151‑22 (MQ=255)
                          tATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCATTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTAt                                                                                                                               <  5:245499/150‑1 (MQ=255)
                             gACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGc                                                                                                                           >  6:350105/1‑151 (MQ=255)
                              aCCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCGCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCt                                                                                                                          <  8:1425665/151‑1 (MQ=255)
                               ccgagtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCTTCAATGTATTGGCtt                                                                                                                         >  3:87226/4‑151 (MQ=255)
                               ccAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggc                                                                                                                         >  4:2176493‑M2/1‑120 (MQ=255)
                                cAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggct                                                                                                                        >  4:801864‑M2/1‑119 (MQ=255)
                                cAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggct                                                                                                                        >  3:2030324‑M2/1‑119 (MQ=255)
                                 aaGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggcta                                                                                                                       >  3:1399518‑M2/1‑118 (MQ=255)
                                 aaGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCttt                                                                                                                        >  8:52957/1‑150 (MQ=255)
                                  agtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaa                                                                                                                      >  2:1421333‑M2/1‑117 (MQ=255)
                                  agtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggcta                                                                                                                       <  6:903877‑M2/150‑34 (MQ=255)
                                  agtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTaa                                                                                                                      <  7:10745/151‑1 (MQ=255)
                                  agtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTa                                                                                                                       >  2:718871/1‑150 (MQ=255)
                                   gtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAAGCCTCTCCCGAGTCAATTCTTGCTATATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaag                                                                                                                     >  5:1253032‑M2/1‑116 (MQ=255)
                                   gtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggcta                                                                                                                       <  7:2157019‑M2/149‑34 (MQ=255)
                                   gtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAAc                                                                                                                     >  1:2089719/1‑151 (MQ=255)
                                   gtagtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAAc                                                                                                                     >  5:1567589/1‑151 (MQ=255)
                                     agtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacacagcaatattggacacgcggctaagtt                                                                                                                   <  1:1595539‑M2/151‑38 (MQ=255)
                                      gtTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGGGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTg                                                                                                                  <  8:1953474/151‑1 (MQ=255)
                                        ttttGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTTAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTgc                                                                                                                 <  5:638659/150‑1 (MQ=255)
                                          ttGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagta                                                                                                               <  5:870231‑M2/150‑42 (MQ=255)
                                            gtgtgtCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTc                                                                                                             <  7:1287977/150‑1 (MQ=255)
                                            gtgtgtCTAACCCCTGTTCTTTATACAGACGATCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaac                                                                                                            >  3:333809‑M2/1‑107 (MQ=255)
                                              gtgtCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactc                                                                                                          <  1:244469‑M2/151‑47 (MQ=255)
                                                    aaCCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGctct                                                                                                     <  4:976120/150‑1 (MQ=255)
                                                     aCCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtc                                                                                                    <  5:475817‑M2/150‑53 (MQ=255)
                                                     aCCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtc                                                                                                    <  6:1008370‑M2/150‑53 (MQ=255)
                                                        ccTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag                                                                                                  <  8:2100711‑M2/149‑55 (MQ=255)
                                                           gTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggt                                                                                              >  8:164821‑M2/1‑92 (MQ=255)
                                                           gTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTtgtg                                                                                              >  1:1001046/1‑150 (MQ=255)
                                                            ttCTTTATACAGACCTTCAGATAAAGACCTTTGCTCATGGAATGTCTCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGa                                                                                             <  7:266348/150‑1 (MQ=255)
                                                             tCTTTATACAGACGTTCATATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATCTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGaa                                                                                            <  1:1095795/150‑1 (MQ=255)
                                                               tttATACAGACGATCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCGCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACATGCGCTCCGCGCTCTGCTTGTGAAGtt                                                                                         >  1:683644/1‑151 (MQ=255)
                                                                ttATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactc                                                                                         >  1:47821‑M2/1‑87 (MQ=255)
                                                                 tataCAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactca                                                                                        >  3:768111‑M2/1‑86 (MQ=255)
                                                                  ataCAGACGTTCCGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcaca                                                                                      >  7:1601057‑M2/1‑85 (MQ=255)
                                                                    aCAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAAc                                                                                     <  6:423926/150‑1 (MQ=255)
                                                                      aGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCGCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgac                                                                                  >  2:197493‑M2/1‑81 (MQ=255)
                                                                        aCGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGaaaa                                                                                <  5:371881/151‑1 (MQ=255)
                                                                         cGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGaaaaa                                                                               <  4:1566103/151‑1 (MQ=255)
                                                                            tCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGaaaaaaa                                                                             <  4:1278602/150‑1 (MQ=255)
                                                                             cAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAAt                                                                            <  8:2010717/150‑1 (MQ=255)
                                                                              aGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacag                                                                          >  2:204295‑M2/1‑73 (MQ=255)
                                                                                   aaGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatca                                                                     >  3:650003‑M2/1‑68 (MQ=255)
                                                                                    aGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaa                                                                    >  5:1674947‑M2/1‑67 (MQ=255)
                                                                                         tttGCTCATGGAATGTCGCAGGTGACCCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgccgctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagt                                                               <  1:1737807‑M2/151‑90 (MQ=255)
                                                                                          ttGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagt                                                               <  5:2063883‑M2/150‑90 (MQ=255)
                                                                                            gCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCact                                                            >  8:1297010/1‑151 (MQ=255)
                                                                                               cATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCGCTAAGTATGCactgcc                                                         >  6:813490/1‑149 (MQ=255)
                                                                                                aTGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCactgact                                                        >  7:915630/1‑151 (MQ=255)
                                                                                                 tGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacc                                                       <  6:1762023‑M2/151‑98 (MQ=255)
                                                                                                  ggAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccc                                                      >  5:107024‑M2/1‑53 (MQ=255)
                                                                                                  ggAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGc                                                      <  1:976253/151‑1 (MQ=255)
                                                                                                    aaTGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCAt                                                    >  6:1484666/1‑151 (MQ=255)
                                                                                                         cGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTcc                                               >  7:1718480/1‑150 (MQ=255)
                                                                                                          gCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCAc                                              >  1:358650/1‑151 (MQ=255)
                                                                                                           cAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACg                                             >  2:1739398/1‑151 (MQ=255)
                                                                                                              gTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGc                                           >  8:767649/1‑150 (MQ=255)
                                                                                                                gAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattc                                        >  4:1766365‑M2/1‑39 (MQ=255)
                                                                                                                gAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattc                                        <  3:516255‑M2/151‑113 (MQ=255)
                                                                                                                  aCCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCgg                                      <  1:1848469/151‑1 (MQ=255)
                                                                                                                  aCCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTGGTGAAGTTGCACGAAAAAAATGCACTAAGTCTGCACTGACTGCATAGTCACGGCAGCgg                                      >  4:883964/1‑151 (MQ=255)
                                                                                                                    catctccaCAGTCAATTATTGCTAAATCTCTCGCTtgatcttacccagcaatagtgtacactcggctaagtgagtaaactctcagtcagagttgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcct                                    >  1:1482219‑M2/3‑35 (MQ=255)
                                                                                                                      tctcCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggccacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctg                                   <  2:881544‑M2/150‑118 (MQ=255)
                                                                                                                      tctcCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTATGCTTGTGAAGTTGAACGAAAAAATGCACTAAGTATGCACTGACTGCATAGTCAAGGCAGCGGGctac                                 >  2:564992/1‑151 (MQ=255)
                                                                                                                        tcCCCAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaat                                <  7:1923860‑M2/151‑121 (MQ=255)
                                                                                                                         ccccAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctga                                  >  3:1748444‑M2/1‑30 (MQ=255)
                                                                                                                           ccAGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatactggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttc                             <  2:1165550‑M2/151‑124 (MQ=255)
                                                                                                                             aGTCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc                           <  4:2089517‑M2/151‑126 (MQ=255)
                                                                                                                             aGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATc                           >  3:1084585/1‑151 (MQ=255)
                                                                                                                             aGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATc                           >  4:721426/1‑151 (MQ=255)
                                                                                                                               tCAATTCTTGCTAAATCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc                           <  3:2129702‑M2/149‑126 (MQ=255)
                                                                                                                                cAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCCGCGGGCTACTCCATcgcg                        >  7:558952/1‑151 (MQ=255)
                                                                                                                                      ttGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACt                  >  2:267386/1‑151 (MQ=255)
                                                                                                                                       tGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTc                 >  8:2182850/1‑151 (MQ=255)
                                                                                                                                       tGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTc                 >  3:1281965/1‑151 (MQ=255)
                                                                                                                                          tAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTcc                >  4:483300/1‑149 (MQ=255)
                                                                                                                                           aaaTCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctga              <  3:461526‑M2/150‑139 (MQ=255)
                                                                                                                                            aaTCTCTCGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaag            >  1:1359574‑M2/1‑11 (MQ=255)
                                                                                                                                            aaTCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGtt            <  6:1983734/151‑1 (MQ=255)
                                                                                                                                            aaTCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGtt            <  1:1213415/151‑1 (MQ=255)
                                                                                                                                            aaTCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGtt            <  4:1070802/151‑1 (MQ=255)
                                                                                                                                              ggatcagCTTTACTAAAATTCATCGGCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGTTaa          <  4:1922901/145‑1 (MQ=255)
                                                                                                                                                 ctcGCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagc           >  8:1168535‑M2/1‑6 (MQ=255)
                                                                                                                                                    gCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGTTAATCGCAt    >  3:188912/1‑151 (MQ=255)
                                                                                                                                                     cTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctga    <  4:335002‑M2/150‑149 (MQ=255)
                                                                                                                                                     cTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctga    <  8:299611‑M2/150‑149 (MQ=255)
                                                                                                                                                     cTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGTTAATCGCAtt   >  4:141154/1‑151 (MQ=255)
                                                                                                                                                      tttACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGTTAATCGCATTg  >  7:141279/1‑151 (MQ=255)
                                                                                                                                                      ttgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaac  <  2:1557333‑M2/151‑151 (MQ=255)
                                                                                                                                                      ttgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaac  <  5:1836300‑M2/151‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
ATAACGATCGGTTTGTTGTTGTGTTTTATGACCAAGTAGTTTTTGTGTGTCTAACCCCTGTTCTTTATACAGACGTTCAGATAAAGACCTTTGCTCATGGAATGTCGCAGGTGAACCCTCTCCCCAGTCAATTCTTGCTAAATCTCTCGCTTTACTAAAATTCATCGTCAATGTATTGGCTTTAACCTGCGCTCCGCGCTCTGCTTGTGAAGTTGAACGAAAAAAATGCACTAAGTATGCACTGACTGCATAGTCACGGCAGCGGGCTACTACATCGCGTAAACTCCAGTTAATCGCATTG  >  NC_000913/1199721‑1200021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.