Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913292,4330GA53.4% 80.7 / inf 569F172F (TTC→TTT) yagKCP4‑6 prophage; conserved protein
Reads supporting (aligned to +/- strand):  ref base G (134/130);  new base A (139/163);  total (275/294)
Fisher's exact test for biased strand distribution p-value = 2.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 576 total aligned reads displayed.

ACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATCGTAATCCCCGAG  >  NC_000913/292284‑292582
                                                                                                                                                     |                                                                                                                                                     
   aaTAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGt                                                                                                                                                   >  5:1430747/1‑151 (MQ=255)
   aaTAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGt                                                                                                                                                   >  5:1718209/1‑151 (MQ=255)
     tAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTc                                                                                                                                                  >  1:1076119/1‑150 (MQ=255)
      aaGGCCTTCTCACTGAGAAGGCCATTACCGCCTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTGTCCTTCACCAACCACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACCGCGCCGGGTCGTTATGCTGGTAGGCat                                                                                                                                                >  3:811950/1‑150 (MQ=255)
      aaGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTc                                                                                                                                                  >  1:498755/1‑149 (MQ=255)
      aaGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTc                                                                                                                                                  >  6:2043595/1‑149 (MQ=255)
        ggCCTTCTCACTGAGATGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTa                                                                                                                                              <  5:840574/151‑1 (MQ=255)
         gCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTAc                                                                                                                                             >  7:1662930/1‑151 (MQ=255)
          ccTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACt                                                                                                                                            <  7:495705/151‑1 (MQ=255)
             tctcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTAt                                                                                                                                          <  8:281744/150‑1 (MQ=255)
               tcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTgg                                                                                                                                       >  1:1959140/1‑151 (MQ=255)
               tcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTgg                                                                                                                                       >  2:1533934/1‑151 (MQ=255)
                cACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGgt                                                                                                                                      <  6:1178885/151‑1 (MQ=255)
                 aCTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGgtg                                                                                                                                     >  6:976863/1‑151 (MQ=255)
                   tGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGgtgt                                                                                                                                    >  7:822597/1‑150 (MQ=255)
                        aGGCCATTACCGACTTACTGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAGCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGca                                                                                                                              <  3:512346/151‑1 (MQ=255)
                        aGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGc                                                                                                                               >  1:980449/1‑150 (MQ=255)
                        aGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTCTCTAGc                                                                                                                               >  5:678081/1‑150 (MQ=255)
                          gCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGcaca                                                                                                                            <  4:816576/151‑1 (MQ=255)
                               tACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACt                                                                                                                        <  8:1627833/150‑1 (MQ=255)
                               tACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACtt                                                                                                                       >  3:1232435/1‑151 (MQ=255)
                               tACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACt                                                                                                                        <  6:3544/150‑1 (MQ=255)
                                 ccGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTAc                                                                                                                     <  5:900286/151‑1 (MQ=255)
                                  cGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTAc                                                                                                                     >  1:1001584/1‑150 (MQ=255)
                                  cGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACa                                                                                                                    <  1:1615108/151‑1 (MQ=255)
                                  cGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGGCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACa                                                                                                                    <  6:1326410/151‑1 (MQ=255)
                                        aCAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAACCACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGCGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTc                                                                                                              >  4:2161825/1‑151 (MQ=255)
                                           gTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAgg                                                                                                           <  5:1531920/151‑1 (MQ=255)
                                            ttCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAgg                                                                                                           >  4:1366995/1‑150 (MQ=255)
                                             tCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGa                                                                                                          >  2:1965139/1‑150 (MQ=255)
                                              cGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGaaa                                                                                                        <  8:1436684/151‑1 (MQ=255)
                                              cGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGaa                                                                                                         <  2:1097332/150‑1 (MQ=255)
                                                aTTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAAt                                                                                                      >  1:801277/1‑151 (MQ=255)
                                                  ttGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATgg                                                                                                    >  2:585582/1‑151 (MQ=255)
                                                  ttGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATg                                                                                                     <  6:15075/150‑1 (MQ=255)
                                                  ttGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATg                                                                                                     <  7:1998498/150‑1 (MQ=255)
                                                   tGGCTACAGCCTAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATgg                                                                                                    <  7:943517/150‑1 (MQ=255)
                                                    ggCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGga                                                                                                   <  6:613756/150‑1 (MQ=255)
                                                     gCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgacc                                                                                                 >  2:1200184/1‑151 (MQ=255)
                                                     gCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgacc                                                                                                 <  7:1853069/151‑1 (MQ=255)
                                                       tACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgacc                                                                                                 >  1:389868/1‑149 (MQ=255)
                                                        aCAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccaga                                                                                              <  7:1287271/151‑1 (MQ=255)
                                                        aCAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccag                                                                                               <  2:317034/150‑1 (MQ=255)
                                                        aCAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccaga                                                                                              <  8:676993/151‑1 (MQ=255)
                                                         cAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccagac                                                                                             <  5:3142/151‑1 (MQ=255)
                                                         cAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccagac                                                                                             >  7:320967/1‑151 (MQ=255)
                                                          aGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccagac                                                                                             >  5:1921397/1‑150 (MQ=255)
                                                          aGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGgaccagacc                                                                                            <  1:174209/151‑1 (MQ=255)
                                                             cGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAgg                                                                                         <  3:2157810/151‑1 (MQ=255)
                                                             cGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAAGAAAATGGACCAGACCAgg                                                                                         <  3:1371505/151‑1 (MQ=255)
                                                              gAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTCGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAggg                                                                                        >  6:2161043/1‑151 (MQ=255)
                                                                aGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTg                                                                                      >  8:1373195/1‑151 (MQ=255)
                                                                  ttACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGAt                                                                                    >  1:1463030/1‑151 (MQ=255)
                                                                   tACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGAt                                                                                    <  2:979052/150‑1 (MQ=255)
                                                                     cGGTCTCCTTCACCAAAGAGTTTGCTTTCTACTTTGGTCAGGTAGTGCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCg                                                                                  <  3:334399/150‑1 (MQ=255)
                                                                       gTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGtct                                                                               >  6:1071847/1‑151 (MQ=255)
                                                                            cTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGTACCAGACCAGGGTGATCGtctcgatc                                                                          >  4:2003170/1‑147 (MQ=255)
                                                                               cACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAg                                                                       <  8:857132/151‑1 (MQ=255)
                                                                               cACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAg                                                                       <  4:1003438/151‑1 (MQ=255)
                                                                               cACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCa                                                                        <  8:1947947/150‑1 (MQ=255)
                                                                                 ccAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGATCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGtc                                                                     >  1:1832562/1‑151 (MQ=255)
                                                                                  cAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGtct                                                                    >  8:1044947/1‑151 (MQ=255)
                                                                                   aaaCACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGtctc                                                                   <  4:710335/151‑1 (MQ=255)
                                                                                         tttGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGgcg                                                             >  3:1505779/1‑151 (MQ=255)
                                                                                          ttGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGgcg                                                             <  4:507422/150‑1 (MQ=255)
                                                                                                 cAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCa                                                     <  8:1804856/151‑1 (MQ=255)
                                                                                                  aaCTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTAAGGGCTCTGTAcc                                                      >  4:1842732/1‑149 (MQ=255)
                                                                                                  aaCTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTAcc                                                      >  3:168609/1‑149 (MQ=255)
                                                                                                   aCTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAgg                                                   >  7:418020/1‑151 (MQ=255)
                                                                                                         gTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGCTCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCtg                                             >  4:1201309/1‑151 (MQ=255)
                                                                                                            aGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGa                                          <  8:1158856/151‑1 (MQ=255)
                                                                                                              gTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGatc                                        <  5:1195696/151‑1 (MQ=255)
                                                                                                               tAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGatc                                        >  7:1603733/1‑150 (MQ=255)
                                                                                                                   ccAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCATCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATccc                                   >  2:833909/1‑151 (MQ=255)
                                                                                                                   ccAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATccc                                   >  5:525618/1‑151 (MQ=255)
                                                                                                                    cAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCct                                  >  3:1962878/1‑151 (MQ=255)
                                                                                                                    cAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCct                                  >  2:1756576/1‑151 (MQ=255)
                                                                                                                    cAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCct                                  >  2:2176793/1‑151 (MQ=255)
                                                                                                                      gTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCctct                                <  3:1095487/151‑1 (MQ=255)
                                                                                                                      gTCGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCATTACTATTGGTGTCTAGCTCATACTTACAGTTTTCAGGAAAATGGACCAGAGCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCctct                                <  4:163542/151‑1 (MQ=255)
                                                                                                                        ggggTTAACAGCTCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCGAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTaa                              <  5:2118103/150‑1 (MQ=255)
                                                                                                                        ggggTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTaa                              <  4:1467038/150‑1 (MQ=255)
                                                                                                                        cGGGTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTaa                              <  6:19080/151‑1 (MQ=255)
                                                                                                                         gggTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAg                             <  6:1687515/151‑1 (MQ=255)
                                                                                                                         gggTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAg                             <  1:657863/151‑1 (MQ=255)
                                                                                                                          ggTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAgg                            <  2:365329/151‑1 (MQ=255)
                                                                                                                          ggTTAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAgg                            <  6:826913/151‑1 (MQ=255)
                                                                                                                             tAACAGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGtt                          >  1:1256113/1‑150 (MQ=255)
                                                                                                                                 aGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGt                     >  7:1384009/1‑151 (MQ=255)
                                                                                                                                 aGCGCCTGGTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGt                     <  4:998710/151‑1 (MQ=255)
                                                                                                                                        ggTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATc              <  1:277630/151‑1 (MQ=255)
                                                                                                                                        ggTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTATCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGCTc              >  8:2070492/1‑151 (MQ=255)
                                                                                                                                        ggTAGTTCTGCTGAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATc              <  7:1158824/151‑1 (MQ=255)
                                                                                                                                         gTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATCg             <  8:453150/151‑1 (MQ=255)
                                                                                                                                           aGTTCTGCTGATAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGAGCTGACCAGTGTGATCGTCTCTCTCCAGTCTCTGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAATGTTATCGTCCTGATCGTa           <  3:1781197/151‑1 (MQ=255)
                                                                                                                                             ttCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATCGTAAt         >  7:2151796/1‑151 (MQ=255)
                                                                                                                                                tgctgAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATCGTAATccc      >  5:573979/1‑151 (MQ=255)
                                                                                                                                                tgctgAAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGCTTATCGTCCTGATCGTAATccc      >  4:376902/1‑151 (MQ=255)
                                                                                                                                                 gctgAAAGTCAGTACTATTGGTGTCTAGCACATAGTTACAGTTTTCAGGAAAATGGACCAGACCAGGGGGATCGGCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGGCCTGATCGTAATcccc     <  1:2111250/151‑1 (MQ=255)
                                                                                                                                                    ggAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATCGTAATCCCCGa   <  7:631404/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTGTCTAGCACATACTTACAGTTTTCAGGAAAATGGACCAGACCAGGGTGATCGTCTCTCTCCAGTCTCAGGGCGCTGTACCAGGCTCCTGTGATCATCCCTCTAAGGTTATCGTCCTGATCGTAATCCCCGAG  >  NC_000913/292284‑292582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑