BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,422,898	0	C	A	51.3%	46.9 / inf	417	pseudogene (198/500 nt)	ydaW	Rac prophage; pseudogene, DNA‑binding protein family;Phage or Prophage Related
Reads supporting (aligned to +/- strand): ref base C (113/90); new base A (108/106); total (221/196)
Fisher's exact test for biased strand distribution p-value = 3.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 421 total aligned reads displayed.

TTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCTGATGAGCT  >  NC_000913/1422748‑1423047

 ttAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACAcc                                                                                                                                                       <  5:1495248/150‑1 (MQ=255)

  tAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTg                                                                                                                                                     >  6:760147/1‑151 (MQ=255)

  tAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATg                                                                                                                                                     >  3:502915/1‑151 (MQ=255)

  tAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATg                                                                                                                                                     >  1:354467/1‑151 (MQ=255)

   aaTGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTg                                                                                                                                                     <  1:285076/150‑1 (MQ=255)

   aaTGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATgg                                                                                                                                                    >  7:1569037/1‑151 (MQ=255)

      ggAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCgt                                                                                                                                                 >  2:367734/1‑151 (MQ=255)

      ggAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCgt                                                                                                                                                 <  7:1255432/151‑1 (MQ=255)

           cTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGc                                                                                                                                            >  7:1664836/1‑151 (MQ=255)

                tttGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGAt                                                                                                                                        >  7:423755/1‑150 (MQ=255)

                   gACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGAGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAAc                                                                                                                                     >  1:1169662/1‑150 (MQ=255)

                    aCGCACTTAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATTGGAACTGAAAAAGGCTGGTTTTGTTTATAAAAGAGCGTACACATGGCGTGTGGCTGATAACaa                                                                                                                                   <  4:132452/151‑1 (MQ=255)

                    aCGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACa                                                                                                                                    >  3:685199/1‑150 (MQ=255)

                      gCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATg                                                                                                                                 <  4:793286/151‑1 (MQ=255)

                       cACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGt                                                                                                                                >  8:1419157/1‑151 (MQ=255)

                        aCTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGtt                                                                                                                               >  4:1456596/1‑151 (MQ=255)

                         cTGAAAGCAAT‑GGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTc                                                                                                                              >  8:322783/1‑150 (MQ=255)

                              aGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTcagcag                                                                                                                         <  2:1532016/151‑1 (MQ=255)

                              aGCAATGCGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTCCTGAACGAACTATGGTAAGTGAAAAACGCTGGTTTTCTGGATAAAAGCGCGTACAGATCGCGTGTGGCTGATAACAAAGTTcagcac                                                                                                                         >  1:1034098/1‑150 (MQ=255)

                                 aaTGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGa                                                                                                                       >  4:1693115/1‑150 (MQ=255)

                                 aaTGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGa                                                                                                                       >  8:891476/1‑150 (MQ=255)

                                    gggAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAAca                                                                                                                    <  4:1140082/150‑1 (MQ=255)

                                     gggaaaGCCACATCCATAGATCTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAAcagc                                                                                                                  <  8:1439426/148‑1 (MQ=255)

                                         aaGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAAcagccagc                                                                                                              >  8:1010965/1‑151 (MQ=255)

                                         aaGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAAcagccagc                                                                                                              <  4:1073474/151‑1 (MQ=255)

                                         aaGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAAcagccagc                                                                                                              >  3:1570239/1‑151 (MQ=255)

                                          aGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAgcg                                                                                                             >  8:1111579/1‑151 (MQ=255)

                                          aGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTCTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAAcagccagcc                                                                                                             >  8:570133/1‑150 (MQ=255)

                                             cacaTCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAgcgc                                                                                                            >  5:1041606/1‑149 (MQ=255)

                                                aTCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCgcaggc                                                                                                        >  5:317183/1‑150 (MQ=255)

                                                aTCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATCGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAAAGTTCAGCAGGAACACCAACCgcaccc                                                                                                        >  6:1171544/1‑147 (MQ=255)

                                                  ccATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCgcaggc                                                                                                        >  2:173593/1‑148 (MQ=255)

                                                  ccATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCgcaggc                                                                                                        >  3:233563/1‑148 (MQ=255)

                                                   cATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAAAGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGaa                                                                                                    <  8:735445/151‑1 (MQ=255)

                                                    aTAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAAc                                                                                                   >  5:1127814/1‑151 (MQ=255)

                                                     tAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACt                                                                                                  >  6:449381/1‑151 (MQ=255)

                                                      aGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACt                                                                                                  <  5:9788/150‑1 (MQ=255)

                                                      aGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACt                                                                                                  <  4:461574/150‑1 (MQ=255)

                                                      aGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTg                                                                                                 >  6:625002/1‑151 (MQ=255)

                                                       gAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGCACTGc                                                                                                >  4:727165/1‑151 (MQ=255)

                                                        aaCTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGcc                                                                                               >  5:744158/1‑151 (MQ=255)

                                                               tgcGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGgaaga                                                                                         >  2:711755/1‑150 (MQ=255)

                                                                 ggcgACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGAAAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAAt                                                                                      <  2:1167597/150‑1 (MQ=255)

                                                                   cgACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATc                                                                                     >  4:389686/1‑150 (MQ=255)

                                                                    gACTTGATATCAGTCGTGAAGAAGTGCTGACCGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCCGCAGGAACAGCCAGCGCAGCCAGAACTGCCGGAAGAAATgac                                                                                   >  4:933098/1‑151 (MQ=255)

                                                                    gACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATcac                                                                                   >  3:35207/1‑151 (MQ=255)

                                                                    gACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATcac                                                                                   <  5:898274/151‑1 (MQ=255)

                                                                         gATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACcaca                                                                               <  6:1618811/150‑1 (MQ=255)

                                                                          atatCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGc                                                                             <  7:109249/151‑1 (MQ=255)

                                                                             tCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGCCTGGTTTTGTTGATAAAAGCTCGTACACCAGGCGAGAGGCTGATAACAATGTTCACCAGGAACAGCCAGCGCAGGCAGAACTTCCGCAAGAAATCACCACTCCAAc                                                                          >  5:1428881/1‑151 (MQ=255)

                                                                              cAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACa                                                                         <  3:659290/151‑1 (MQ=255)

                                                                              cAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAAc                                                                          >  1:905436/1‑150 (MQ=255)

                                                                                gTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGt                                                                       <  2:314393/151‑1 (MQ=255)

                                                                                gTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGt                                                                       >  7:1151699/1‑151 (MQ=255)

                                                                                 tCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGt                                                                       >  4:286156/1‑150 (MQ=255)

                                                                                       agaagTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGaaa                                                                <  8:83466/151‑1 (MQ=255)

                                                                                        gaagTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACCCCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACCGCCAGCGCAGGCAGAAGTGCCGTAAGAAATCACAACCGCAAAAGTACCGaaa                                                                >  6:713396/1‑150 (MQ=255)

                                                                                           gTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAAtct                                                            <  1:1270023/151‑1 (MQ=255)

                                                                                            tGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAAtctc                                                           >  1:1623008/1‑151 (MQ=255)

                                                                                             gCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCa                                                          <  7:1445141/151‑1 (MQ=255)

                                                                                               tGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCCCAGCAACAGTAGCGAAAAtctc                                                           >  3:1095886/1‑148 (MQ=255)

                                                                                               tGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAAtctc                                                           >  7:24540/1‑148 (MQ=255)

                                                                                                gaacgaacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCagag                                                       <  8:1755173/151‑1 (MQ=255)

                                                                                                gaacgaacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGAGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCag                                                         >  1:1110363/1‑149 (MQ=255)

                                                                                                  acgaacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACGCCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTg                                                     >  6:370847/1‑151 (MQ=255)

                                                                                                    gaacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCg                                                   >  6:1472363/1‑151 (MQ=255)

                                                                                                     aacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCg                                                   >  8:1245101/1‑150 (MQ=255)

                                                                                                     aacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCg                                                   >  6:203111/1‑150 (MQ=255)

                                                                                                     aacTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGa                                                  <  3:1722707/151‑1 (MQ=255)

                                                                                                       cTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGAtt                                                >  7:705995/1‑151 (MQ=255)

                                                                                                       cTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCAGGAAGAAATCACCACAGAAAAAGTAGCGAAAATCTAAGAGTGCGAtt                                                >  6:1312736/1‑151 (MQ=255)

                                                                                                       atATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGAtt                                                <  5:549872/150‑1 (MQ=255)

                                                                                                         aTGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGAttt                                               <  1:1571725/150‑1 (MQ=255)

                                                                                                         aTGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGAttt                                               >  7:345313/1‑150 (MQ=255)

                                                                                                            ggAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAAcc                                           >  2:1110554/1‑151 (MQ=255)

                                                                                                             gAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACcg                                          >  2:1393031/1‑151 (MQ=255)

                                                                                                                    aaaaGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGAt                                   >  2:1624048/1‑151 (MQ=255)

                                                                                                                    aaaaGGCTGGTTTTGTTGATAAAAGCGCGCACACCTGGCGTGTGGCTGATAAAAATGTTCAGCAGGAACAGCCAGCGCAGGCATAACTGCCGGAATAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGAt                                   <  2:52387/151‑1 (MQ=255)

                                                                                                                      aaGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTg                                 <  7:1056859/151‑1 (MQ=255)

                                                                                                                       aGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGa                                <  5:409663/151‑1 (MQ=255)

                                                                                                                       aGGCTGGTTTTGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGa                                <  8:1622086/151‑1 (MQ=255)

                                                                                                                         gCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGaac                              <  5:1272582/151‑1 (MQ=255)

                                                                                                                           tGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGaaca                             >  2:799985/1‑150 (MQ=255)

                                                                                                                            ggTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGaaca                             <  5:212474/149‑1 (MQ=255)

                                                                                                                             gTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACg                          >  2:606538/1‑151 (MQ=255)

                                                                                                                             gTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACg                          >  7:633113/1‑151 (MQ=255)

                                                                                                                              ttttGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACg                          >  5:630856/1‑150 (MQ=255)

                                                                                                                               tttGTTGATAAAAGCGCGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACg                          >  1:470139/1‑149 (MQ=255)

                                                                                                                                ttgttgATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAgg                       >  1:812250/1‑151 (MQ=255)

                                                                                                                                ttgttgATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAgg                       >  8:417380/1‑151 (MQ=255)

                                                                                                                                ttgttgATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAg                        <  3:454036/150‑1 (MQ=255)

                                                                                                                                          aaGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACg             <  5:513082/151‑1 (MQ=255)

                                                                                                                                          aaGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACCGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACCATTGAACAACGAGGACCACAAACg             >  7:83837/1‑151 (MQ=255)

                                                                                                                                            gcgcGTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGc           <  1:1390035/151‑1 (MQ=255)

                                                                                                                                              gcgTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCtg         >  8:1535363/1‑151 (MQ=255)

                                                                                                                                              gcgTACACATGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCtg         <  2:964061/151‑1 (MQ=255)

                                                                                                                                                 tACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCtgatg      >  3:1295395/1‑151 (MQ=255)

                                                                                                                                                  acacATGGCGTGTGGCTGATAACAATGTTAAGCAGGAACAGCCAGCGCAGCAAGAACTGCCGAAAGAAATAACAACAGCAACAGTAGCTAAAATCTAAGAGTGAGATTTAACCCCGACGATAGAACAAAGAGTACCACAAACGGCtca        >  3:942516/1‑146 (MQ=255)

                                                                                                                                                   cacCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCtgatg      >  3:1369088/1‑149 (MQ=255)

                                                                                                                                                    acCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCTGATGAGc   >  7:137739/1‑151 (MQ=255)

TTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCTGATGAGCT  >  NC_000913/1422748‑1423047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`