Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 915,213 | 0 | A | C | 25.7% | 247.9 / 31.1 | 198 | intergenic (‑356/+139) | ybjE/aqpZ | putative transporter/aquaporin Z |
Reads supporting (aligned to +/- strand): ref base A (110/26); new base C (47/0); total (162/36) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.95e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 201 total aligned reads displayed.
GCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTT > NC_000913/915063‑915363 | gCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGa < 3:764192/151‑1 (MQ=31) gCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGa < 1:470580/151‑1 (MQ=31) ccGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAt > 2:512530/1‑151 (MQ=31) cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt < 2:615573/151‑1 (MQ=31) cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt < 7:531199/151‑1 (MQ=31) cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt < 6:738660/151‑1 (MQ=31) ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 8:1420552/151‑1 (MQ=31) ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 4:912381/151‑1 (MQ=31) ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 5:222222/151‑1 (MQ=31) ggggCAGCCCACATGGATGGGGGCTGAGGGCGCGTTTTACAGGGAGGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 5:1919080/151‑1 (MQ=14) ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACTGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgc < 1:1075600/151‑1 (MQ=14) cAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccg < 8:1852030/151‑1 (MQ=31) aGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgc < 2:334296/151‑1 (MQ=31) gCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCCGGGGCGGCGGCGCGTGgccgcc > 8:372139/1‑151 (MQ=9) cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGCTTGGCCGccc > 8:1734984/1‑151 (MQ=14) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccc < 3:1905610/151‑1 (MQ=31) caTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑Tg < 6:1635905/151‑1 (MQ=31) caTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑Tg > 6:405821/1‑151 (MQ=31) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGGGCGTGGCCCCCCCC‑Agc > 4:1328489/1‑151 (MQ=11) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑Tgc < 4:141000/151‑1 (MQ=31) ggATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGGGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑Tgcg < 8:639443/150‑1 (MQ=14) gATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑Tgcgcg > 7:1303508/1‑151 (MQ=31) gATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑Tgcgcg < 7:451682/151‑1 (MQ=31) tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑Tgcgcgcg > 6:518600/1‑150 (MQ=14) tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGACGCCCCC‑Tgcgcgc > 5:1251308/1‑150 (MQ=14) ggCTGAGGGCGCGTTTTACAGGGGTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGATTGGCCCCCCCC‑TGCGCCCTCCtt > 6:1713486/1‑151 (MQ=9) ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTccat > 4:1276163/1‑149 (MQ=14) ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCtt > 7:189286/1‑151 (MQ=31) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCCGCGCTTGGCCGCCCCC‑TGCGCGCGCCGTgcgc > 4:53736/1‑151 (MQ=255) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTgcgc > 1:1161413/1‑151 (MQ=31) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGCTTGGCCGCCCCC‑TGCGCGCTCCGTgcgc > 5:1306066/1‑151 (MQ=9) gcgcGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAgg > 3:654311/1‑150 (MQ=14) cgcgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGCGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTgg > 2:396677/1‑151 (MQ=17) gcgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTgg > 6:1762387/1‑151 (MQ=32) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTGGCGCCAGTGGc > 5:1599362/1‑150 (MQ=18) tttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGCGTGGCCGCCCCC‑CGCCCGCGCCATGCGCCCGTgggca > 8:1623872/1‑147 (MQ=11) tACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAatat > 6:1054663/1‑151 (MQ=37) tACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCCGGGCTGCAGGGGGCGGCCGCGCGTGGCCCCCCCC‑AGCGCGCGCCGGGCGCCCGTGGCCatat > 5:1679525/1‑151 (MQ=11) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAatattt > 6:1244638/1‑149 (MQ=37) ggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGCTTGGCCGCCCCC‑CGCGCGCGCCGTGCGCCAGGGGGAATATGTTgg > 6:310974/1‑150 (MQ=11) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTAGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑TGCGCGCTCCGTGCGCCAGTGGCAATATGTTGCGTAgg > 1:1524669/1‑150 (MQ=255) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGCGTGGCCGCCCCC‑AGCGCGCGCCGTGCGCCAGTGGGAAAATGTTTGTTAGGTc > 6:1585026/1‑151 (MQ=11) cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCGCTTGGCCGCCCCC‑TGCGCGGTCCATGCCCCAGAGGCAATATGTTGCTTAGCTCATg > 6:1515775/1‑150 (MQ=17) gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaa > 1:1728164/1‑149 (MQ=255) ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAggc > 4:316543/1‑150 (MQ=255) ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgg > 4:157072/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgg > 6:108023/1‑149 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgg > 2:11071/1‑149 (MQ=255) ccGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑GGCGCGCGCCTTGCGCCAGTGGGAATATGTTGGGTAGGTCATGGAAGGAgcggc > 1:944277/1‑149 (MQ=14) tAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑TGCGCGCTCCGTGCGCCAGTGGCAATATGTTGCTTAGCTGATGAAAGGTGCGccaca > 6:1623536/1‑150 (MQ=255) tAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑GGCGCGCTCCGTGCGCCACGGGCAATATGTTTCTTTGCTGATGAAACGCGCGcaacc > 2:1203875/1‑149 (MQ=14) gCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCCGCGCTTGGCCCCCCCC‑AGCGCCCTCCATGCGCCAGTGGCAATATTTTTCTTATCTCAAGAAAAGAGCGccaca > 8:23360/1‑148 (MQ=14) gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGGGATTTGGCGCCCCC‑AGCGCGCGCCTTGCGCCAGTGGGAAAATTTTTCTTAGGTCATGAAAGGAGCGCCACAAgatg > 1:1837997/1‑150 (MQ=17) gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑AGCGCGCTCCTTGCGCCAGTGGCAATATGTTGGTTAGCTCATGAAAGGAGCGCCACAAgatg > 2:577051/1‑150 (MQ=255) aGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGCGGCGGCGGCGATTGGCCGCCCCC‑AGCGCGCTCCTTGCGCCACTGGCAATATGTTGCTTAGCTCAAGAAAGGCGCGCAACAAGatgatg > 2:1346124/1‑150 (MQ=255) gggATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCGAATGGCCGCCCCC‑TGCGCGGTGCTTGCGCCACTTGCAATATGTTGCTTAGCAGAAGATAGGGGCCGAACAAGAtgaaga > 7:153805/1‑150 (MQ=14) aTAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑TGCGCGCTCCGTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATc > 4:1948761/1‑150 (MQ=255) aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAc > 8:1179069/1‑151 (MQ=255) cGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCGCATGAAAGGAGCGCAACAAGATGATGCATGAACaaat > 5:1291155/1‑151 (MQ=255) taGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATTTTGCTTAGCTCATGAAAGGAGCGCAAAAAGATGATTAATCAAAatat > 1:989108/2‑150 (MQ=255) gAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTTCGCCAGTTGCAATATGTTTCTTAGCTCATGAAAGGAGCGCAAAAACATGATGAATAAAAatat > 5:996902/1‑150 (MQ=18) aCCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGGGCTTGGGCGCCCCC‑GGCGCGCGCCGTGGGCCAGTGGCCATATGTTGCTTAGCGCATGAAAAGCGCGCCACAAGATGATGAATAAAAATATaaaaac > 8:149721/1‑150 (MQ=18) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTACTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACAt > 1:1047020/1‑150 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGATTGGCCGCCCCC‑AGCGCGCACCATTCGCCACTTGGAATATTTTTCTTAGCTCATGAAAAGAGCCCAACAAGATGATGAATCAACAAATAaaaacaa > 5:335791/1‑149 (MQ=18) gcgcAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCGTGGGCGCCCCC‑GGCGCGCGCCTTGCGGCAGGGGGAATATTTTGGGTAGCTCATGAAAGGCGCGGCACAAGATGATGGATCAAAATATAAAAACAtat > 8:527777/1‑149 (MQ=17) cAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTGATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTa > 5:115658/1‑150 (MQ=255) ctgcgATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaa > 7:1238640/3‑150 (MQ=255) cggcgATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaa > 6:814256/1‑150 (MQ=255) gcgATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGCGTGGGCGCCCCC‑TGCGCGCTCCTTGCGGCAGGGGCAATATGTTGCTTAGGTCATGAAAGGCGCGCAACCAGATGTTGGATCAACATATAACAACCTCTTaaaaaa > 6:1405243/1‑150 (MQ=21) gcgATTTTGTTCGCCAGAGCCCGGGGGTGCCCGGGGCGGCGGCGGTTGGGCGCCCCC‑GGCGCGCGCCGTGCGCCAGGGGGAATATTTTTGTTATCTCAAGGAAGGAGCGCCACAAGATTGTGAATCAAAATATAAAAACAACATtaaaaa > 8:607864/1‑150 (MQ=12) aTTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc > 2:173396/1‑151 (MQ=255) ttttGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCCCGCTCCTTGCGCCAGTGGCAATATGTTGGTTAGCTGATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc > 2:691084/1‑151 (MQ=255) ttttGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCCCCCCC‑GGCGCGCGCCGTGCGCCCGTGGGAATAATTTTGTTAGCGCCTGCAAGGAGCGCCACAAGCAGATTCAACAACATATAAAAACATGTTAAAAAAACGcc > 4:813933/1‑151 (MQ=12) tttGTTCGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGCTTGGCCGCCCCC‑TGCGCCCTCCTTGCGCCAGTGGCAATATTTTGCTTTGCTCATGCAAGGAGCGCAACAAGATGATGAATCAACAAATAACAACATCTTAAAAAAACGccg > 6:940206/1‑150 (MQ=21) ggccccccgcgCCGGGGGGGGCGGGGGGGGGCGGCGTGTCCCCCCCCCC‑CCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGAc < 1:1655275/141‑1 (MQ=255) gTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGAc > 2:970932/1‑151 (MQ=255) tCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCCCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTTAAAAAAGGCCTGACAt > 3:1589264/1‑151 (MQ=255) cGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGGGGCAATATGTTGCTTAGCTCATGAAAGGCGCGCAACAAGATGATGAATAAACATATAAAAACATCTTTAAAAAAGGGAGGACAtt > 5:1024785/1‑151 (MQ=21) ccAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGCGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCGGCCATTAc > 1:810607/1‑151 (MQ=255) cAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTAcc > 3:1771805/1‑150 (MQ=255) agagCCCGGGGGTGCACGGGGCGGCGGCGATTGGCCGCCCCC‑GGCCCGCTGCATTCGCCACAGGGAAAATATTTCTTAGCGGATGTAAAGAGCGCAACAAGATATTGAATCAACATATAACAAAAAAATAAAAAAACGCCATACATTAccc > 7:604235/1‑149 (MQ=12) gagCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCGCCCCC‑TGCGCGCGCCGTGCGCCAGTGGCAATATGTTGCTTAGCTCATGCAAGGGGCGCAACAAGATGCTGAATCAACATATAACAACATCTTAAAAAAAGGCCGGACATTACGcc > 2:1532729/1‑151 (MQ=37) cGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc > 1:26107/1‑151 (MQ=255) gggggTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCt > 7:120887/1‑151 (MQ=255) gggggTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCt > 7:765441/1‑151 (MQ=255) gggggTGCAGGGGGCCGCGGCCATTGGGCCCCCCC‑GGCCCGCTCCGTGCGCCCGTGGCAAAATTTTTCTTAGCTCAAGAAAGGAGCGCAACAAGATGATGAATCAACAAATAAAAACAACATAAAAAAACGCCGGGCATTAccccccggcc > 3:53535/1‑145 (MQ=255) ggtgggggggggggggGCG‑TTGGCCGCCCCCGGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt < 3:1858497/145‑1 (MQ=255) gTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 3:1379426/1‑151 (MQ=255) gtggggggggggGCTTTGGGCCCCCCCG‑GGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGt < 1:1689211/149‑1 (MQ=255) aGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtt > 1:1404043/1‑151 (MQ=255) ggcggcggcGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACACCATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatt > 1:309787/1‑151 (MQ=255) ggcggcgATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTtaattaat > 7:1816147/1‑151 (MQ=255) cggcgATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc > 4:1047181/1‑150 (MQ=255) ggcgATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCAc > 3:8442/1‑151 (MQ=255) ggcgATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCAc > 4:182017/1‑151 (MQ=255) gATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCGTTGTGCGTTAATTAATCACGCt > 4:235452/1‑151 (MQ=255) gATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCt > 7:313218/1‑151 (MQ=255) gATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCt > 8:1861281/1‑151 (MQ=255) gATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCt > 6:1887877/1‑151 (MQ=255) aTTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCtt > 6:833392/1‑151 (MQ=255) | GCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTT > NC_000913/915063‑915363 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |