Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,947,591	0	A	.	38.0%	213.7 / 136.6	92	intergenic (+18/‑16)	metW/metV	tRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (54/3);  new base . (31/4);  total (85/7)
Fisher's exact test for biased strand distribution p-value = 4.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.82e-01

ATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947446‑2947740                                                                                                                                                    |                                                                                                                                                      atccttcccccGCAATCAATTAAAATTTGATGAATTAACGCATTACCGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGc                                                                                                                                                  <  3:1406510/145‑1 (MQ=18)                                                                              gtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTTATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCtcgtcg                                                                                                          <  2:447761/114‑1 (MQ=255)                                                                                     tCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTCATGAAGTAAAAGCAGTAAGGTGACGCGGGCTGGAGAAGCATGGTAGCTATTCGGGCTCATAACCCGAAGCTCGTCGGTTCAAATCCCGCCCCCGCa                                                               >  3:1082592/1‑150 (MQ=14)                                                                                                    cgtcgGTTCAAATCCGGCCCCCGCAACCAA‑TG‑AAATAACAGGATCTAAAAGCAGTTCGTGGACGTGGGGTCCAGCATACTCGGTGCTCGTCGGGCTCATAAAGCGAACGGATTTGGGTCGACTCCCGCCAGCGCAAACAAAGATTGAacac                                               >  2:666901/1‑151 (MQ=9)                                                                                                                 ccGGCCCCCGCAACCAA‑TC‑AAATTTGAGGAAGTAATAGCAGTAGGGTGACGGGGGGTCGATAAGCCTCGTAGCTCGTAGGGCACATAAACCGACCGTCGAAGGATCAAATCCGGCCCCCGCCACCAAATAATGAACACCCAAAAGGctgat                                  >  3:1366720/1‑149 (MQ=255)                                                                                                                   ggCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTACCGGGTGtttt                                >  4:1688544/1‑151 (MQ=255)                                                                                                                    gCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGttttt                               >  2:1760999/1‑151 (MQ=255)                                                                                                                    gCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGttttt                               >  6:300397/1‑151 (MQ=255)                                                                                                                    gCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACCGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAATATTGAACACCCAAACGGGTGttttt                               >  2:513730/1‑151 (MQ=255)                                                                                                                        ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGt                           >  3:1732315/1‑151 (MQ=255)                                                                                                                        ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGt                           >  3:287840/1‑151 (MQ=255)                                                                                                                         cGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCACCCAATTATTTAACACCCTAACGGGTGTTTTTTTGtt                          >  1:197218/1‑151 (MQ=255)                                                                                                                         cGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTgat                          >  1:140204/1‑149 (MQ=255)                                                                                                                         cGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGtt                          >  8:1472282/1‑151 (MQ=255)                                                                                                                          gCAACCAATTA‑AAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATAGATCAACATAACACGTGttttgtgtttt                         >  2:577469/1‑144 (MQ=11)                                                                                                                          gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATACCCCGAAGGTCGTCGGTTCCAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGttt                         >  4:1171634/1‑151 (MQ=255)                                                                                                                          gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGttt                         >  4:1016188/1‑151 (MQ=255)                                                                                                                           cAACCAATTA‑AAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACCGGGGTGTTGTTGTTTc                        >  7:724232/1‑151 (MQ=11)                                                                                                                           cAACCAATTA‑AAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAACAACAAAACGGGTGTTTTTGTGtttg                        >  5:1551529/1‑150 (MQ=11)                                                                                                                           cAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTc                        >  4:1204695/1‑151 (MQ=255)                                                                                                                           cAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTc                        >  7:1926422/1‑151 (MQ=255)                                                                                                                           cAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTc                        >  6:1027031/1‑151 (MQ=255)                                                                                                                            aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGAATGAACAACATAACAGCTCTTTTTTTGtaacg                       >  3:1028924/1‑147 (MQ=11)                                                                                                                            aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTTACGGGTGGTTTTTTGGTTCt                       >  1:1644798/1‑151 (MQ=255)                                                                                                                            aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCt                       >  8:1825981/1‑151 (MQ=255)                                                                                                                            aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCt                       >  8:1637846/1‑151 (MQ=255)                                                                                                                              accaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACGCTCACGGGTGTTTTGTTGTTtgtg                      >  8:1772160/9‑151 (MQ=11)                                                                                                                               ccaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACAACCTAAAGGGTGTTTTTTTGTTTCTgg                     >  5:801969/8‑151 (MQ=14)                                                                                                                               ccaattaaaaTTTGAGGACGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTgg                     <  3:1770729/144‑1 (MQ=17)                                                                                                                               cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGt                    >  2:1654211/1‑151 (MQ=255)                                                                                                                               cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGt                    >  2:1874870/1‑151 (MQ=255)                                                                                                                               cAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGt                    >  2:1118288/1‑151 (MQ=255)                                                                                                                                 aattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGATCACGCTGACGGGGGTTTTTTTGTTTCTGGtg                   >  4:273286/6‑150 (MQ=14)                                                                                                                                 aattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCATAACAGGGGATTTCTTGttaggggtg                   >  4:1069616/6‑144 (MQ=11)                                                                                                                                 aattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGAATGAACACCCTATAGGGGCTTTTTTGGttgggggtg                   >  4:643525/6‑144 (MQ=1)                                                                                                                                 a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtct                  >  1:1295337/1‑151 (MQ=255)                                                                                                                                 a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtct                  >  2:1434128/1‑151 (MQ=255)                                                                                                                                 a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtct                  >  2:6834/1‑151 (MQ=255)                                                                                                                                 a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtct                  >  2:1709655/1‑151 (MQ=255)                                                                                                                                  attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTCACCCGTGATTTTTTTGTGCTGGtct                  >  2:113515/5‑151 (MQ=11)                                                                                                                                   ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAGCCTCACGGGTGTTTAGTTGTATGTGGtctg                 >  2:848695/4‑150 (MQ=14)                                                                                                                                   ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTGTTTTTGTTTCTGGtctg                 >  4:1410604/4‑150 (MQ=255)                                                                                                                                   ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGAACACCCTAACAGGTGTGTTATTGTTTCTGGtct                  >  5:1951627/4‑150 (MQ=14)                                                                                                                                   ttaaaaTTGGATGACGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATACCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtct                  <  4:1952956/147‑1 (MQ=17)                                                                                                                                   tC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtctc                 >  4:235688/1‑151 (MQ=255)                                                                                                                                   tC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtctc                 >  5:725395/1‑151 (MQ=255)                                                                                                                                   tC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtctc                 >  1:906919/1‑151 (MQ=255)                                                                                                                                   tC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtctc                 >  2:1566785/1‑151 (MQ=255)                                                                                                                                    taaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTTAACAACCAAAAGAGTGTTTTATTGTTAGAGGTCTcc                >  7:1647576/3‑151 (MQ=11)                                                                                                                                    taaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGAACACCCt                                            >  4:378581/3‑123 (MQ=12)                                                                                                                                    c‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGCGCTCATAACCCGAACGTCGTCGGATCAAATCCGCCCCCCGCAACCAATAATTGAACACCATAACCCGTGTTTATTTGTTTCTGGtctac                >  3:75058/1‑149 (MQ=17)                                                                                                                                     aaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTCACGGGTGTTTTGTTGGTTCTGGTCTccc               >  8:1476763/2‑151 (MQ=255)                                                                                                                                     aaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               <  2:724595/150‑1 (MQ=255)                                                                                                                                      aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  1:460665/1‑151 (MQ=255)                                                                                                                                      aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTGTTTTGTTTCTGGTCTccc               >  4:646231/1‑151 (MQ=255)                                                                                                                                      aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTCTTTTTGTTTCTGGTCTccc               >  3:244184/1‑151 (MQ=255)                                                                                                                                      aaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATAGAACACGCACACACGTGGTTTTGTGTGTCGGGTCTgccc              >  5:18073/1‑150 (MQ=11)                                                                                                                                       aaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATAGAACAACCAAAAAGGTGAGTTTTTGGTTCTGGTCTGCCa              >  7:384361/1‑150 (MQ=11)                                                                                                                                        aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  6:1887245/1‑151 (MQ=255)                                                                                                                                        aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  7:1592565/1‑151 (MQ=255)                                                                                                                                         tttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  4:68965/1‑150 (MQ=255)                                                                                                                                         tttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  8:752270/1‑150 (MQ=255)                                                                                                                                         tttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  6:623154/1‑150 (MQ=255)                                                                                                                                         tttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGG‑CCCCGCAACCAATTATTGAACAACCTACCGGGTGGTTTTTTGTGTCTGGTCTCCCATaa           >  2:1459244/1‑150 (MQ=17)                                                                                                                                          ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  3:1421876/1‑150 (MQ=255)                                                                                                                                          ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  6:582078/1‑150 (MQ=255)                                                                                                                                          ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  2:1321300/1‑150 (MQ=255)                                                                                                                                          ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  4:1703235/1‑150 (MQ=255)                                                                                                                                          ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  2:1330529/1‑150 (MQ=255)                                                                                                                                          ttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACGCTAACGGGGGAGTTGTTGTTTCTGGGCTCCCATaa           >  2:266504/1‑150 (MQ=17)                                                                                                                                          ttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGAACACCAAAACAGGGGATTTATTTTTACTGGTCTCCCaaaa           >  5:687341/1‑150 (MQ=11)                                                                                                                                           tgatgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaa           >  5:1403112/1‑150 (MQ=255)                                                                                                                                           tgatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTTAACACCCTAACGCGTGTTTTTTTGTTTCGGGTCTCCCATaaa          >  2:436529/1‑150 (MQ=17)                                                                                                                                           tgatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTGAACACCCTATCGCGTCTTTTTTTGTTTCTGGTCTCCCATaaa          >  8:1484946/1‑150 (MQ=17)                                                                                                                                            gatgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaa          >  3:438075/1‑150 (MQ=255)                                                                                                                                            gatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaa         >  7:1510684/1‑150 (MQ=255)                                                                                                                                             atgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaa         >  3:556559/1‑150 (MQ=255)                                                                                                                                             atgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaa         >  2:399055/1‑150 (MQ=255)                                                                                                                                             atgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaa         >  2:1210163/1‑150 (MQ=255)                                                                                                                                             atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAAGACCCTCAAGGCGGATTTTTTTTTTCTGGTCTCCCTTaaaa         >  8:407762/1‑149 (MQ=14)                                                                                                                                             atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCGCTTCGGGGTAATAACCCGATGGTCGTCGGTGCAAAGCCGGCCCCCGCAACCATTTATTTAACAACATTACGGGTCTTTTTTTGTTTGGGGGCTCCCAaaaaaac       >  4:1850779/1‑150 (MQ=14)                                                                                                                                              tgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAACAACATAAACAATGATTTATTGTAACAGGTCTCCCATaaaaaac      >  3:1415875/1‑150 (MQ=11)                                                                                                                                              tgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGATCACGCACTAGGGTCTTTAGTTTGTTCGGGTCTCCCAaaaaaacg      >  4:555104/1‑149 (MQ=11)                                                                                                                                              tgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAATGAACAACCTAACAGGTCTGTTATTGTTACAGGTCTCCCATaaaaa        >  7:136487/1‑149 (MQ=14)                                                                                                                                               gaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        >  6:1114417/1‑149 (MQ=255)                                                                                                                                               gaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGTAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAAAGGGTGTGTTTTTGTTTCAGGTCTCCAATAAAAACgc     >  5:779701/1‑151 (MQ=17)                                                                                                                                               gaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTGTCCAATaa           >  4:1494614/1‑145 (MQ=255)                                                                                                                                               gaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAg      <  5:1409021/150‑1 (MQ=255)                                                                                                                                                taatAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAg      <  2:384459/147‑1 (MQ=255)                                                                                                                                                 aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcg    >  2:126872/1‑151 (MQ=255)                                                                                                                                                   tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  4:388957/1‑151 (MQ=255)                                                                                                                                                   tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  5:175026/1‑151 (MQ=255)                                                                                                                                                    aaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  7:1717998/1‑150 (MQ=255)                                                                                                                                                    aaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  2:1839167/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947446‑2947740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑