Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,269,9940GT27.0% 251.4 / 23.1 194intergenic (+392/+631)yhaC/garKpentapetide repeats‑related protein/glycerate kinase I
Reads supporting (aligned to +/- strand):  ref base G (26/96);  new base T (1/44);  total (28/166)
Fisher's exact test for biased strand distribution p-value = 1.71e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 199 total aligned reads displayed.

GAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTAT  >  NC_000913/3269845‑3270140
                                                                                                                                                     |                                                                                                                                                  
gAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGAGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTg                                                                                                                                                    <  5:1485285/150‑1 (MQ=255)
gAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTT‑GGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGa                                                                                                                                                   <  7:820505/150‑1 (MQ=255)
 aaaCCCGCCGGAACGGTTTATTACGTAAATCAGGTAAAACTGACCGATAAGCCGCTGTCTTTTGGGTATAGTGACGTTGACCCTCAATCATATTACTTCAGCTCCAAAACAAAAAAACAGCCGCACCGGGGTTTTCCGTGAATCAGGTGac                                                                                                                                                  >  4:1572726/1‑150 (MQ=9)
  aaCCCGCCGGATCGGGTTATTACGTACATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTCGACAGGCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGaaa                                                                                                                                                 <  6:211438/151‑1 (MQ=11)
   aCCCGCCGGAACGGGTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAAc                                                                                                                                                <  8:805700/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                               <  8:624514/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                               <  2:1522290/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                               <  2:585395/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGGCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                               <  6:1779772/151‑1 (MQ=255)
     ccgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTg                                                                                                                                              <  5:1834940/151‑1 (MQ=255)
     ccgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTg                                                                                                                                              <  5:709012/151‑1 (MQ=255)
     ccgcagtatccgggtattaCGTATAACAGGTCAAACTGTCCGCTAAGCCGCTTTCTTTTGGGTATCGTGTGGTGGTCAGTAATTCTTCTTTCTGCCCCTCCAAAAGCAAATCCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTg                                                                                                                                              <  8:1420938/137‑1 (MQ=11)
      cgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAAGAAAAAACCCCCCGAACCGGGTTTTTACGTAAAACAGATGaaaata                                                                                                                                              >  7:1192586/1‑147 (MQ=17)
       gccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCATTCTGCCCCACCAAAACAAAAAAACCGCCCAAGCGGGTTTTTAACTAAAACAGGTGacaaagg                                                                                                                                             >  3:471851/1‑144 (MQ=17)
        ccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGAcn                                                                                                                                           <  7:60866/151‑2 (MQ=255)
        acgtaaaggTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGAcc                                                                                                                                           <  7:52097/144‑1 (MQ=255)
          ggAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGa                                                                                                                                         <  7:866395/151‑1 (MQ=255)
          ggAACGGTTTATTACGTAAATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAAAGTCGTGGAAAATCATTCAACTTTAAGCACCTCCAAAAAAAAAAAAACAAAAAAGCGGGTTTTTACGTAAAACAGGTGAAACTGAcca                                                                                                                                          >  5:1295928/1‑149 (MQ=14)
            aagggTTTATTACGTACATCATGTAAAACTGACCGATAAGCCGCGTTCTTTTGGGTTTAGTGTCGTGGACAGTGATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATa                                                                                                                                       <  3:1566123/148‑1 (MQ=255)
             aCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATaa                                                                                                                                      <  6:461794/151‑1 (MQ=255)
             aCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATaa                                                                                                                                      <  1:1813476/151‑1 (MQ=255)
             aCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATaa                                                                                                                                      <  8:1582075/151‑1 (MQ=255)
              cGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGTGGAGAGTGAATCAGCTTTGTTGCCCTCCAAAACAAAAAACCCGCCGAAGCGGGGTTTTTCGTTAATCAGGTGCAGCTggggcgtgcc                                                                                                                                     >  6:553544/1‑142 (MQ=14)
                gTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGcc                                                                                                                                   <  1:1066017/151‑1 (MQ=255)
                 tttATTACGTACATCAGTTAAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGcc                                                                                                                                   <  8:1255651/150‑1 (MQ=255)
                 tttATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGAGAAAAGAATAGAGTCCAGTAAGTAAACATTCTTCACATCCCAAAATAAAAACCAGCACAACCGATAATTTAAAAAAAAAAAGTGAAACGGACCGGTAAGCCg                                                                                                                                  >  1:603736/1‑151 (MQ=255)
                  ttattaCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCg                                                                                                                                  <  8:1235004/150‑1 (MQ=255)
                    attaCGTACATCAGCTAACACGGACCGATAAGCCGCTTTCTTTAGGCTATAGTGTCGTGGACAGGCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGct                                                                                                                                <  1:1583342/150‑1 (MQ=14)
                      taCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGcttt                                                                                                                              <  6:1490926/150‑1 (MQ=40)
                       tcgtatttgtttttaaaCTGACCGATAAGCCGCTTTTTTTTGTGGTTTGTGTAGTGGTTAGTGATTCATGTTTCTGCTGCTCTATAAGTAAAAACCCGCCGAAGCGTGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGgtttc                                                                                                                             <  3:1719280/136‑1 (MQ=2)
                       acttACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGTTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttct                                                                                                                            <  3:982554/148‑1 (MQ=255)
                       acttACAACATGTAAAACTTACCGTTAAGCCGCTTTCTTTTGGGTATAGTGTCGGCGACAGTCATTCATCTATCTGCCCCTCAAAAAGTAAAAAACCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttc                                                                                                                             <  8:1047273/147‑1 (MQ=11)
                       aCGTACATCAGTTAAAACTTACCGATAAGCCGCTTTCTTTTGCGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAATCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttct                                                                                                                            <  1:1749827/151‑1 (MQ=255)
                       aCGTACATCAGTTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttct                                                                                                                            <  2:1348308/151‑1 (MQ=255)
                         gTACATCATGTAAAACTGACCGATAAGCGGCTTTCTTTTGTGTATAGTGTCGTGGACAGTCTTTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttcttt                                                                                                                          <  8:586698/151‑1 (MQ=255)
                           aCATCATGTATAACTGACCGTTAAGGTGCTTTCTTTTGGTTTTAGTGTCGTGGACAGTGATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTg                                                                                                                        <  7:1299065/151‑1 (MQ=11)
                           aCATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTTGGTATCGTCTCGTGGACTGTGATTCCTCTTTCTGCCCCTCCAAAAGTACAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCtttt                                                                                                                         <  4:449340/150‑1 (MQ=14)
                           aCATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAACTTAAAACCCCCCGCATCCGCTGCTTTCCGAAGACAGGAGATACTTAGCGCTAATCCGctttctatat                                                                                                                        >  6:158567/1‑147 (MQ=9)
                              acacgTAAAAATGACCGATAAGCTGCTTGCTTTTGTGTATAGTGTCGGGGACAGGCATTCATCTTTCTGCCACTCCAAAATTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGt                                                                                                                     <  2:649181/147‑1 (MQ=11)
                               cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGta                                                                                                                    <  4:243756/151‑1 (MQ=35)
                                acgTAACACTGACCGATAAGCCGCTTTCTTTTGGGTATCGTGTCGGGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAACCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGtat                                                                                                                   <  8:181956/149‑1 (MQ=255)
                                    aaaaCTGACCGATAAGCCGCTTTCTTTTGTGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgt                                                                                                                <  8:506604/150‑1 (MQ=25)
                                    aaaaCTGACCGATAAGCCGCTTTCTTTTGCGTAGAGTGTCGGGGACAGGCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgt                                                                                                                <  4:1118307/150‑1 (MQ=255)
                                     ataCTGACCGATAAGCCGCTTTCATTTTTGTCTAGTCTCGGCGACTGGCCTAACTATTTCTCCCACTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgtgt                                                                                                              <  6:1361974/149‑1 (MQ=11)
                                     aaaCTGACCGATAAGCCGCTTTCTTTTGGTTATAGTGTCGTGGACAATCAATAAACTTTAAACCCCACAAAAAAAAAAAAACCGCCGAAGAGGGTTTTTAAATAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTTggggggaaggg                                                                                                              >  7:1508336/1‑143 (MQ=2)
                                      aaCTTAGCGATCAGCCGCTTTCAGTTGCTGATCGTCTCGAGGACTGGGATACATCTTACTCCCACTCCAAAAGTACAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTc                                                                                                             <  2:1009585/151‑1 (MQ=11)
                                      aaCTGACCGATAATACGCTTTCTTTTTGGTATAGTCTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTc                                                                                                             <  6:123763/151‑1 (MQ=255)
                                       actttgcgttatgaggCTTTCTTTTGTTTTTTGTGTCGTGGAATGGGTTACTTCTTTATGGCACTCAAAAAGTATAAACCCGCCGAATCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCg                                                                                                            <  5:1685813/136‑1 (MQ=2)
                                          gACCGTTAAGCCGCTTTCTTTTGCGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTATAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTgg                                                                                                         <  7:270872/151‑1 (MQ=255)
                                          gACCGATAATCAGCTTTCTTTTTCGTATAGTGTCGTCGACAGTCTTTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAACCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTg                                                                                                          <  6:1299003/150‑1 (MQ=11)
                                           aacGATAAGGCGTTTTAATTTTGTTATAGTCTACTTGTCAGTTATTATTATTTCTCGCACTCAAAAATTTTAAACCCGCCGTATCGGGTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGa                                                                                                        <  7:127452/149‑1 (MQ=2)
                                             cGATATGCCGGTTTCATTTGGTTATAGTGTCGTGGAATGGCATTGATCTTTCTCCCCCTCCAAAAGTATAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACa                                                                                                      <  6:309299/151‑1 (MQ=11)
                                             cGATAAGCCTCTTTCTTTTGTGTATAGTGTCTTGGACAGTAATTCTTTATTCTGACCTTCAAAAATTTAAAACCCGCCGTATCGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACa                                                                                                      <  3:1478592/151‑1 (MQ=11)
                                                 aatgcGCTTTCTTTATACTTTAGTGTCGTGGAAAGGGTTACTTCTTACTGCCCCTCCAAAAGAATAAACCCGCCGAATCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtca                                                                                                  <  1:207590/147‑1 (MQ=11)
                                                  aGCCGCTGTCTTTTGGCTACCGTGTCGTGGAAAGGGATTCATCTTTCTGCCCCTCCAAAAGTACAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcat                                                                                                 <  5:469546/151‑1 (MQ=11)
                                                     gggattctttTTTCTATAGTGTCGTCGAATGGCATATATATATCTCCCCCTCCAAAATTACAAACCCGCCGAATCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcattca                                                                                              <  6:1087831/147‑1 (MQ=11)
                                                     cGCTTTCTTTTGGGTATAGTGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGAAAAAACCCGCCGAAGCGGGGTTTTTCGTAAAACAGGTGTAACTGACCGATAAGCCGGGTTCTGTTGGGGTTAgtgtagggggtaggccagc                                                                                               >  6:1124400/1‑135 (MQ=11)
                                                     cGCTTTCTTTTGGGTATAGTGTCGTGGACACTCATTCAACATTCTGCCCCGCCAAAACTAAAAAACCCCCCCAGCGCGGTTTTACGTAAAAAAGGGGAAACAGAACGAAAACCCGGGTTCTTTGGGGGAGAGTGAGGTGGGCacggaggac                                                                                              >  8:229381/1‑143 (MQ=2)
                                                           cattagcctataGTGTCGTCGACAGTCATACATCTATCTGCCCCTCCAAAAGTACAAACCCGCCGAATCGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCttt                                                                                         <  6:756287/142‑1 (MQ=11)
                                                              tttcgTAAAGTGTCGTCGACAGTCAATCTTATATCTGCCACTCCAAAAGTAAAAACCCGCCGAATCGGTTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTg                                                                                      <  8:361024/146‑1 (MQ=11)
                                                                               gactcgcggtattatttATGCCACTCAAAAAGTACAAACCCGCCGCAGCGGTTTATTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCaaaaa                                                                    <  2:1395104/137‑1 (MQ=11)
                                                                                aatgtgtatcctatttATGCCACTCAAAAAGTATAAACCCGCCGTATCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAc                                                                   <  7:1254078/138‑1 (MQ=11)
                                                                                 aagcgtgttatCTTTCTCCCACTCCAAAAGGAAAAACCCGCCGAAGCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAcc                                                                  <  2:1901247/142‑1 (MQ=11)
                                                                                     gtgttttatttCTGGCACTCAAAAATTATAAACCCGCCGTATCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCGTCTTTCTGCCCCTCCAAAAGCAAAAACccgc                                                               <  3:210931/142‑1 (MQ=11)
                                                                                      attcgtCTTTCTGGCACTCCAAAAGTTAAAACCCGCCGTATCGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgccg                                                             <  4:614269/151‑1 (MQ=11)
                                                                                        tcatCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGCGGACACTGACCGAGAGGCCGCTTACTGTTGGGTATATTGGCGTGGCGGGTGGATAAAATTTATGGCCCGCCGCAAGCAAAAACccgcgggc                                                           >  8:1180791/1‑147 (MQ=2)
                                                                                         gagcatagggCCACTCAAAAAGTAAAAACCCGCCGAAACGGTTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGaa                                                           <  2:832954/141‑1 (MQ=11)
                                                                                           tatatCTGGCACTACAAAATTTTAAACCCGCCGTATCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGc                                                         <  7:1586989/146‑1 (MQ=11)
                                                                                           tCTTTATGGCACTCAAAAAGTAAAAACCCGCCGAAGCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGaa                                                           <  4:1906826/148‑1 (MQ=11)
                                                                                                     ccTCCAACAGCAAACACCCGCCGCAGCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg                                              <  4:825568/151‑1 (MQ=255)
                                                                                                        ccAAAAGTAAAAACCCGCCGCAGCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaa                                           <  8:170394/151‑1 (MQ=25)
                                                                                                        caaaaatctcaaaCCCGCCGTATCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGt                                             <  1:1112313/139‑1 (MQ=11)
                                                                                                         cAAAAGCACAAACCCGCCGCAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                          <  8:90090/151‑1 (MQ=9)
                                                                                                         aaaaaTTAAAAACCCGCCGCAGCGGTTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                          <  5:541506/150‑1 (MQ=255)
                                                                                                          acaaggataaaCCCGCCGCAGCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAc                                         <  4:948479/143‑1 (MQ=255)
                                                                                                          acaagcacaaaCCCGCCGCACCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAc                                         <  2:1163467/143‑1 (MQ=11)
                                                                                                          aaaaGTAAAAACCCGCCGAAGCGGGTTTTTACTTAAAACAGGTGAAACTGACCGATAAGACTGTTTCTTATGGGTATAGTGTCGTGGCCACGCATTAATAAATAAGAACCGCCAAAAGCAAAAACCCGCCGCAGCgggggtttggggggac                                         >  5:666592/1‑138 (MQ=2)
                                                                                                           aaaGTTTAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAcc                                        <  3:1384398/151‑1 (MQ=255)
                                                                                                           aaaGGACAAACCCGCCGCACCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAcc                                        <  6:832170/151‑1 (MQ=255)
                                                                                                           aaaGCACAAACCCGCCGCACCGGGTTTTTACGTACAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAcc                                        <  2:1636325/151‑1 (MQ=255)
                                                                                                           aaaGCACAAACCCGCCGCACCGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAcc                                        <  8:1670970/151‑1 (MQ=255)
                                                                                                            aaGTAAAAACCCGCCGCAGCGGTTTTTTACTTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCa                                       <  5:1611126/151‑1 (MQ=255)
                                                                                                                 taaaCCCGCCGTATCGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTg                                   <  5:1750931/149‑1 (MQ=11)
                                                                                                                 gaaaCCCGCCGATGCGTTTTTTTACGTAAAAGAGGTGAAACTGTGCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAGCAGGTg                                   <  2:1180390/149‑1 (MQ=11)
                                                                                                                  aaaCCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGTAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGaa                                 <  3:1658271/151‑1 (MQ=25)
                                                                                                                  aaaCCCGCCGAAGCGGGTTTTTACGTAAAAAAGGTGAAACTGACCGATAACCCGCTAACTTTTGGGTATATAGTCGTGGACACTCAATCAAATTTATTACACTCCAAAACCAAAAACCCGCCGAAGCGGGGTTTTACGTaagacggggggc                                 >  1:493051/1‑141 (MQ=2)
                                                                                                                    acgcgccgAAGCGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAc                               <  5:1161325/148‑1 (MQ=25)
                                                                                                                    aCCCGCCGCATCGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAc                               <  1:810334/151‑1 (MQ=255)
                                                                                                                    aCCCGCCGAAGCGGGTTATTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAc                               <  1:985121/151‑1 (MQ=16)
                                                                                                                     cccGCCGTATCGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACt                              <  3:1161021/151‑1 (MQ=255)
                                                                                                                     cccGCCGAACCGGGTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACt                              <  7:1766548/151‑1 (MQ=16)
                                                                                                                      ccgccgAATCGGTTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTg                             <  1:1468617/151‑1 (MQ=255)
                                                                                                                         ccgtaccGGGTTTTTACGTAAAACAGGTTAAACTGACCTATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAcc                          <  1:758148/145‑1 (MQ=255)
                                                                                                                         ccgAATCGGTTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGGCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAcc                          <  6:981226/151‑1 (MQ=255)
                                                                                                                                gggTTTTTACGTACAACAGGTTAAACTGACCGATAATCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGc                   <  4:1325921/151‑1 (MQ=255)
                                                                                                                                gggTTTTTACGTAAAACAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGc                   <  4:345270/151‑1 (MQ=25)
                                                                                                                                 gttttttACTTATAACATGTTAAACTGAGCGTGAAGCCGCTGTCTTTTTTCTAGCGTCTCGTGGACAGTGTTTCTTATTTCTGCCACTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGcc                  <  7:1908451/149‑1 (MQ=2)
                                                                                                                                 gtttattACTTAAAACATGTTAAACTTACCGATAAGCCGCTTTCTTTTGCGTATAGTGTCGTCGCAAGTCATTTATCTTTCTGCCCCTCAAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGcc                  <  2:595293/146‑1 (MQ=11)
                                                                                                                                        aCGTAAATCAGGTTAACCTGAACTATACGGCTCATTCTTTTGGGTCTAGTGTCTTGCCCTGTCACGTATGTTTCTCCCCCGCCAAAAGCAAAAACCCGCCGCACCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGctttc            <  4:1669294/150‑1 (MQ=2)
                                                                                                                                                 aGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGCAGTCATTGATCTTTGTGCCCCGCCAAAAACAAAAAACCCCCCCAGCGGGGTTTTAAGGAAACCACGGGCAACAGGCCGATAACCCGGGTTCTTTTTGGttt  >  8:434009/1‑149 (MQ=2)
                                                                                                                                                     |                                                                                                                                                  
GAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTAT  >  NC_000913/3269845‑3270140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑