| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,060 | 0 | C | T | 26.3% | 960.3 / inf | 726 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (249/239); new base T (87/87); total (386/340) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.94e-18 | |||||||||||
Only 100 of 737 total aligned reads displayed.
AGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAC > NC_000913/4295910‑4296210 | gTCCGATCACGCGTGTACCCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGc < 4:1049894/151‑1 (MQ=11) tCGGATTAGGCGTTTCTGCTGCATCGGTCTTCAACGTCTTTTGCTACTCTTATCTCTTCTTATCTGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGc < 7:976066/150‑1 (MQ=11) tCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGcc > 2:1694443/1‑151 (MQ=14) tCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGcc > 1:945869/1‑151 (MQ=31) gtgATAAGGCGTTTATGCCGCATAAGAGATCAAGGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCt < 5:105070/149‑1 (MQ=255) cGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCt > 4:1391650/1‑151 (MQ=14) cGGAGAAGCCGTTTCTGCCGCAGCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCt < 2:1481574/151‑1 (MQ=255) gATAAGGCGTTTATGCCGCATACGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTg > 3:353157/1‑150 (MQ=14) aaGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGc > 5:1741553/1‑151 (MQ=14) aaGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGc < 4:50766/151‑1 (MQ=31) aGGGGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCg < 1:289921/151‑1 (MQ=14) gcggctATGCCGCACCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGACACCGCAATAGCCTGATTTAGCGGGATTTTGTAGGGCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGAc < 6:1686182/146‑1 (MQ=11) gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGc > 7:129067/1‑151 (MQ=14) gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGc > 8:304048/1‑151 (MQ=14) ttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCGGATgcggcgggg > 5:1327996/1‑148 (MQ=9) ttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCAG‑ACATCAAAGCCTGATGCGACGCtt > 3:782715/1‑151 (MQ=14) tATGCCGGATCATACTTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCtt < 3:193014/150‑1 (MQ=9) aTGCCGCATCCGACATCAACGCCTTATGCGACGCTTCCCGCGTCTTATCAGGCCTACGCGAGACTGCTGAATAGCCTGATTTAGCGTGATTTTGTAGTTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGc < 2:1056208/151‑1 (MQ=11) gCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCcg < 4:334939/151‑1 (MQ=21) aagcataggACATCAACTCCTGATGGGATGTTTATAGTGTCTTATTAGTCCTAGGCCATACTTGGTAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAGGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCcgc < 1:1126504/143‑1 (MQ=2) cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCCCCTCCG‑ACATCAACGCCTGATGCGACGCTTGCcgcg > 8:6961/1‑151 (MQ=25) cGCATACTAGATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCcgcg < 5:1544119/151‑1 (MQ=255) cgtaCATCAACGGCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCtt < 8:461414/147‑1 (MQ=255) cataCATCAACGCCTGATGCTACGGTTAACGCGTCTTATCAGGCCTACGCCAGACAGAGCAATAGCCTTATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTa < 1:396532/148‑1 (MQ=255) cGACATCAACGCCTGATGCGACGCTTAACGAGTCTTATCAGGACTAAACCAGACAGCACAATAGACTGATTTAGCGTGATTTTCTAGTTAGTATAAAAAAATTACGCCGCATCCG‑ACATCAACGCCTGATGCGACTCTTCCCGCGACTTa > 1:1685348/1‑150 (MQ=11) gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATc > 4:972797/1‑151 (MQ=21) aCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATc > 4:217398/1‑150 (MQ=21) aCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCa < 7:1604586/151‑1 (MQ=35) cATCAAAGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 2:1818727/151‑1 (MQ=25) aTCAGCGGCTGCTGCTTCGGTTATCGCGTCGTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 6:331165/151‑1 (MQ=11) aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg > 1:610015/1‑151 (MQ=21) tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTCCCGCGTCTTATCATGc > 6:1361121/1‑151 (MQ=18) aactctttaTGAGACGCTTTAGGTGTCTTATTAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt < 7:549807/143‑1 (MQ=11) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 2:252191/1‑151 (MQ=21) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt < 1:1028229/151‑1 (MQ=35) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGAAAGACAGAGCAATAGCATGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGGCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc > 1:1539121/1‑150 (MQ=255) acgaattatgtttcGCTAAACGCGTCTTATCAGTTCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa < 7:81952/138‑1 (MQ=11) ccTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGc < 2:1339869/151‑1 (MQ=25) ccTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatct > 8:53097/1‑148 (MQ=17) tGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctt > 1:1485504/1‑146 (MQ=14) tGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctt > 5:1175783/1‑146 (MQ=14) gATGCGCCGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTCGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctta < 8:810470/150‑6 (MQ=255) gATGCGACGCTTAACTCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctt < 7:1044262/149‑5 (MQ=9) gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctta < 8:1676325/150‑6 (MQ=9) gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCac > 3:1053759/1‑150 (MQ=25) gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAAAGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTagcccac > 3:1251871/1‑145 (MQ=255) gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACa < 3:519676/151‑1 (MQ=35) cGACGCTTCACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAg < 8:128418/151‑1 (MQ=25) cGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAg < 4:796847/151‑1 (MQ=35) gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATATTGTAGGTCGCATAAGGCGTTTAAGCCGAATCCG‑ACATCAACGACTGATGCGACGCTTGCCGCGTATTATAAGGCCTACGCCAGACAgc > 5:444557/1‑151 (MQ=11) aCGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACGCCAGACAgcg > 7:1807203/1‑151 (MQ=14) aaCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACTCCGCATCAG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa < 1:1252538/150‑1 (MQ=25) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGCCGCTTGCCGCGTCTTATCAGCCCTACGCCCGACCGCGCAATAGcg > 6:1774472/1‑150 (MQ=255) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGcc > 6:632699/1‑151 (MQ=35) cgTATTATCATGCCTACGCCATACAGATAAATACCATGATTTAGCTTGATTTTTTATGGCTGATAAGGCTTTTACTCCGCTTAAT‑ACTTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTg < 1:1855920/151‑1 (MQ=2) gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAAAGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGGCAGACAGCGCAATAGGCTgc > 2:460067/1‑150 (MQ=255) tCTTATCTTTCCTACGCCATACAGATCAATAGGCTGATTTATCGTGATTTTGTTTTTAGGATAAGGCTTATACTCCCCATCCT‑ATTTCAAGGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACTCCAGACAGCGCAATAGCCt < 5:591445/148‑1 (MQ=12) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGAGAGACAGAGGAATAGCATGAt > 5:26407/1‑151 (MQ=255) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAAGACAGCCAGCGCAATAGGGTGAt > 8:1558197/1‑151 (MQ=255) ttATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGGCTGAttt > 6:1907481/1‑151 (MQ=25) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTa < 3:915634/150‑1 (MQ=35) cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAAAGCCTGATGCGACGCTAGAACCGAATAAACACGACTACGCAAAACAACGAAATAGCCTGATATAGc > 5:972863/1‑150 (MQ=11) tACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTCCCGCGTCTTATCAGGCCTACGCCAGACACCACAATACCCTGATATAGCGTGAttt > 3:1584413/1‑151 (MQ=255) cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAttttt > 4:1864346/1‑150 (MQ=25) gCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAAGGCAGCCAGCGCAATAGATCGATTTAGCGAGATTATGt > 4:657787/1‑151 (MQ=11) caccgctcactAGCCTGCATTTGCGTGATTTTGTAGGGCGCTCACGGCCTTTACCCCGCATACG‑TCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGt < 6:1183325/141‑1 (MQ=11) ccagggtaaTAGGGTGTTTTTGGGTGAGTTTGGATGTGGGGTTAGGCGTTTACGCCGCATCCG‑ACTTGAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc < 4:167750/144‑1 (MQ=11) aCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAAAGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAACACATACAAAGCAATACCATGATTTAAAGAGATTTTATAgcac > 1:795248/1‑148 (MQ=11) cccAATAGCCGGATGTAGAGTGATTTTGTAGGGGGGAGATGCCGCTTCGGCCGC‑TCCGTTCTTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAt < 4:1748671/149‑1 (MQ=11) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACCCTTCCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGGGATTTTGTAGGTCGGAt > 6:1542559/1‑150 (MQ=16) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTa > 2:1214395/1‑150 (MQ=35) tttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGc > 4:1509320/1‑151 (MQ=25) ttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAAGAAAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGcc > 7:1770590/1‑151 (MQ=255) aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGc > 8:1467269/1‑151 (MQ=35) gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGAGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATc > 7:701965/1‑151 (MQ=14) tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGAGCAATAGCATGATTTAGCGTCATTTTGTAGGTCGGATAAGGCGTTTATGCCGAATcc > 5:837226/1‑151 (MQ=255) tttGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAc > 3:1172092/1‑150 (MQ=35) ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt > 2:896659/1‑151 (MQ=35) ggtcgggcggagcgcgCGTTTCCGCCGGACCCG‑CCATCAAGGCCTGATGCGACGCTTCCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAt < 2:65680/135‑1 (MQ=11) gTAGGTCGGAGCAGGCGTGTACCCCGCAGCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATc < 8:1120795/150‑1 (MQ=255) aGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAc > 6:750025/1‑151 (MQ=35) tCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAAGACGCATCCGACATCAACGcc > 7:1150886/1‑151 (MQ=25) gATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTTCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGTATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGa < 3:1358569/151‑1 (MQ=18) aTAACGCGTTAACGCCGCATCCG‑ACATCAACGCCTGATGCGACTCGTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGAt < 6:823347/151‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTTTAGGTCGGATAAGGCGTTTATGCCGCATCCGCCATCAACGCCTGATg > 6:1081139/1‑151 (MQ=25) cGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCGAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGACGGATCCGACATCAAAGCCTGATGCGACg > 3:676975/1‑151 (MQ=255) cGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTATGCCGAATCCGACATCAACGCCTGATGCGACg > 6:540137/1‑151 (MQ=25) ttACGCCGGATAAT‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCt < 8:1857133/150‑1 (MQ=255) ccgcATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAcgc > 2:1882428/1‑151 (MQ=33) ccgcATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAcgc > 4:1212922/1‑151 (MQ=33) cgcATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAcgcg > 6:1290590/1‑151 (MQ=33) caccG‑ACCGCAAGGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCAGACATCAACGCCTGATGCGACGCTTAACGCGTCt < 2:522137/149‑1 (MQ=9) aTCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCt > 6:1458661/1‑151 (MQ=33) gg‑ACATCAACGACTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTAt < 7:395111/150‑1 (MQ=18) cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGcc > 7:1888900/1‑151 (MQ=32) aaCGCCTGATGCGACTCTTGCCGCGTCTTATCAGGCCTTCGCCAGACTTCGCAATTGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCt < 7:1409443/151‑1 (MQ=255) aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAAGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt > 3:1779941/1‑151 (MQ=14) aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCt > 8:1180173/1‑150 (MQ=31) cGCCTGATGCGACGCTTGCCGCTTCTTATCAGGCCTACTCCAGACAGCTCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAc < 3:1667768/151‑1 (MQ=2) cGCCTGATGCGACGCCTCCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAc < 5:1917814/151‑1 (MQ=11) | AGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCG‑ACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAC > NC_000913/4295910‑4296210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |