Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,5910A.40.8% 202.8 / 159.2 98intergenic (+18/‑16)metW/metVtRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (55/3);  new base . (36/4);  total (91/7)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-03

Only 100 of 102 total aligned reads displayed.

TCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947447‑2947740
                                                                                                                                                  |                                                                                                                                                       
aaattacggtgCAATCAATAATATTTTGTTGAAGTTATGGATTACTGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCa                                                                                                                                                   <  1:1421581/141‑1 (MQ=14)
                                                                          tcgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGt                                                                                                                                  <  2:774018/94‑1 (MQ=255)
                                                                            gtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTCATGAAGTAAACGCAGTAGGGTGACGCGGGGTGCAGCAGCCTGGTACCTCGACGGGCTCATAACCCGAACCTCGTCCGGTCAAATCCCGcc                                                                       >  5:1261010/1‑151 (MQ=11)
                                                                                   tCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGATGTAAAAGCAGTACGGTGACGCGGGCTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAACGTCGTGCGATCACATCCGGCCCCCGcc                                                                 >  2:487497/1‑149 (MQ=14)
                                                                                                gtcgtcGGTTCAAATCCGGCCCCCGCAACCAA‑TT‑AAATTTGATGAACTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGtcgtcg                                                                                     <  1:263772/117‑1 (MQ=255)
                                                                                                        ttCAAATCCGGCCCCCGCAACCAA‑TA‑AATTTTCAGGAAGTAATAGCAGTTCGGTGACGCGGGGTCGAGAAGCCTCGTAGCTAGTCGGGCTCTTAACACGAACGGCTACGGTTCAAGTCCCGCCCACGCAACCAAATATTGAACACCC‑‑Tac                                          >  2:357809/1‑149 (MQ=9)
                                                                                                                 ggCCCCCGCAACCAA‑TA‑AAATATCATGAAGTAAAAGCAGTACGGTGACGAGGTCTGGAGAAAAATGGAAGCTCGTAGGGCAGATAACGCGAAGCTAGACCGAACAAGTCCCCCCAACGCAACCAAAAAATGAACAcccaacagggagtta                                   >  3:796945/1‑138 (MQ=255)
                                                                                                                   cccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGtttttt                              >  7:1192046/1‑151 (MQ=255)
                                                                                                                    ccccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGttttttt                             >  6:535920/1‑151 (MQ=255)
                                                                                                                     cccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTg                            >  1:1562851/1‑151 (MQ=255)
                                                                                                                     cccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGCGTGGAGCAGCCTGGTAGCTCGTCTGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCAGCAACCAATTATTGAACACCC‑‑TAACGGGTGtatttttt                            >  4:757750/1‑150 (MQ=255)
                                                                                                                      ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGt                           >  6:1163457/1‑151 (MQ=255)
                                                                                                                      ccGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGt                           >  5:148129/1‑151 (MQ=255)
                                                                                                                       cGCAACCAATTA‑AAATTTGATGAAGT‑AAAGCAGTACGGTGAAGCGGGGTGGAGCAGACTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATACGGCACCCGCAACCAATTATTTAACACCA‑‑TGAAGGGGGTTTTTTTGt                           >  3:1525889/1‑150 (MQ=11)
                                                                                                                        gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGttt                         >  5:1301304/1‑151 (MQ=255)
                                                                                                                        gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGttt                         >  5:1185088/1‑151 (MQ=255)
                                                                                                                        gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGttt                         >  7:615364/1‑151 (MQ=255)
                                                                                                                        gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTCttt                         >  2:278212/1‑151 (MQ=255)
                                                                                                                        gCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGttt                         >  5:1660323/1‑151 (MQ=255)
                                                                                                                         cAACCAATTA‑AAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGAAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGATCAAATCCGGCCCCCGCAACCAAAAAATTAACAACA‑‑AAAAGGGTGTTTAtttttta                         >  6:870615/1‑149 (MQ=14)
                                                                                                                         cAACCAATTA‑AAATATGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGCGGGTCAAATCCGGCCCCCGCAACCAATTAAAGATCACCCAATAACGGCTGtttttgtttc                          >  4:377603/1‑146 (MQ=11)
                                                                                                                          aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACACCC‑‑AAACGGGGGTTTTTTTGTTTCt                       >  8:37989/1‑151 (MQ=11)
                                                                                                                          aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TGACGGGGGTTTTTGTGGTTcg                       >  2:1423469/1‑150 (MQ=11)
                                                                                                                          aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCA‑‑TAAAAGGTGAGTTTTTGTTTCt                       >  1:1516685/1‑151 (MQ=11)
                                                                                                                          aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCA‑‑AAAAAGGTGTTTATTTGtacat                       >  3:76580/1‑147 (MQ=11)
                                                                                                                          aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACA‑‑AAACAGGTGTTTTTTTGTATCt                       >  6:809530/1‑151 (MQ=11)
                                                                                                                          aaCCAA‑TTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAACAACC‑‑AGAAGGGTGTTTTTGTGTTTcg                       >  7:776546/1‑150 (MQ=11)
                                                                                                                          aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCt                       >  2:953569/1‑151 (MQ=255)
                                                                                                                          aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCt                       >  5:1439233/1‑151 (MQ=255)
                                                                                                                          aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCt                       >  1:96152/1‑151 (MQ=255)
                                                                                                                          aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCt                       >  7:30947/1‑151 (MQ=255)
                                                                                                                          aaCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCt                       >  4:739698/1‑151 (MQ=255)
                                                                                                                           aCCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTg                      >  2:1036490/1‑151 (MQ=255)
                                                                                                                            ccAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATGACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTgg                     >  6:799071/1‑151 (MQ=255)
                                                                                                                            accaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TCAACGGTGTTTTTTTTTTTCTg                      >  5:17864/9‑151 (MQ=11)
                                                                                                                             cAA‑TC‑AAATTTTATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGGGCAGCCGGGTAGCGCGGCGGGGGGATAACCCGCAGGTGGTCGGTTGCAATCCGGCCCCCGCCACCAAATATTTAACACCC‑‑GAAAGGGTGTTTTTTTGTTTGTGGt                    >  1:694338/1‑151 (MQ=17)
                                                                                                                              caattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGGGTGTTTTTGTTTCTggg                    >  8:251530/7‑150 (MQ=14)
                                                                                                                              caattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATTAACACGC‑‑TAAACGCTGATTTTTTCTTTCTGGt                    >  8:643502/7‑151 (MQ=11)
                                                                                                                              aa‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCCGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGtc                   >  7:644060/1‑151 (MQ=255)
                                                                                                                              aa‑TC‑AAATATGATGAAGTAAAAGCAGTACGGTGACGCGGGGTCGAGCAGCCTCGTAGCTCGTCGAGCTCATAACCCGAAGGTCGTCCGTTCAAATCCGCCCCCCGCAACCAATTAATGAACACAC‑‑TAACCCGAGtttttaagttaaatgt                    >  3:1437789/1‑139 (MQ=14)
                                                                                                                               aattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGTACACCC‑‑TAAAGGGTGtttttttttt                          >  3:206365/6‑144 (MQ=14)
                                                                                                                               aattaaaaTTTCATCAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGtt                          <  2:206687/139‑1 (MQ=14)
                                                                                                                               a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGtct                  >  6:925996/1‑151 (MQ=255)
                                                                                                                               a‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGtct                  >  2:1711634/1‑151 (MQ=255)
                                                                                                                                attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACACCC‑‑TAACGGCGGTTTTTTTGTTACTGGtct                  >  8:304584/5‑151 (MQ=14)
                                                                                                                                attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TCTCCCGTGTTTATTTGTTTGTGGgct                  >  2:161202/5‑151 (MQ=11)
                                                                                                                                attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACC‑‑TAACGGATCTTTTTTTTTTTCGGGtgt                  >  2:1442541/5‑149 (MQ=14)
                                                                                                                                attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTGAACACGC‑‑TCAAGGGGGTGTTTTTggtgggggggt                  >  2:748715/5‑141 (MQ=11)
                                                                                                                                 ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACGC‑‑TTACGGGGGATTTGTTGTTACTGGgctc                 >  2:1609764/4‑151 (MQ=11)
                                                                                                                                  taaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTGAACACCC‑‑ACACGCCGGTTTTgttgttaggggtctgc                >  5:1199573/3‑141 (MQ=11)
                                                                                                                                  taaaaTTTGATGAAGT‑AAAGCAGTAAGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCCTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAGAAAAACC‑‑AAAAAACGGTTTATTTGTTTCTGGTCTcc                >  1:826588/3‑151 (MQ=1)
                                                                                                                                  c‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAACTCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTcc                >  7:1084413/1‑151 (MQ=255)
                                                                                                                                  c‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTcc                >  4:1255503/1‑151 (MQ=255)
                                                                                                                                  c‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCAGGCCCCCGCAACCAATTATTGAACACCC‑‑TAAGGGGTGTTTTTTTCTTTCTGGTCTcc                >  5:1046756/1‑151 (MQ=255)
                                                                                                                                   aaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATATAACAACC‑‑TAAAGGCTCATTTATTGGTTCAGGTCTccc               >  4:1012641/2‑151 (MQ=11)
                                                                                                                                    aaaTTTGATTAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACggg                                      <  5:1147769/127‑1 (MQ=255)
                                                                                                                                    aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  3:1438708/1‑151 (MQ=255)
                                                                                                                                    aaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCA‑‑TAAAGGGTGTTTTTTTTTTTCTGGTCTcca               >  4:401927/1‑149 (MQ=255)
                                                                                                                                    aaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATTAACAACA‑‑AAACggc                                      >  6:1145982/1‑126 (MQ=11)
                                                                                                                                     aaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  7:572214/1‑150 (MQ=255)
                                                                                                                                     aaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCA‑‑TGACCGGGGTGTTTTGGTTTCTGGTCTGCCa              >  2:144562/1‑150 (MQ=14)
                                                                                                                                      aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  4:259725/1‑151 (MQ=255)
                                                                                                                                      aTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACAC‑‑TAACGGGTGGTTTTTTGTTTCTGGTCTCCCAt             >  5:1389506/1‑151 (MQ=255)
                                                                                                                                      aTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAACACCC‑‑AAAAGGGTGTTTTTTTGTTTCTGGCCTCCCAt             >  5:1684537/1‑150 (MQ=17)
                                                                                                                                      aTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGAACACCC‑‑TAAAGCGTCTTTTATTGTTTCTGGTCTCCCAt             >  1:1177914/1‑150 (MQ=17)
                                                                                                                                        ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  1:695575/1‑150 (MQ=255)
                                                                                                                                        ttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  5:1287996/1‑150 (MQ=255)
                                                                                                                                        ttGATGAAGTAAAAGCAGTACGGTGACGCGGAGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATa            >  5:1378469/1‑150 (MQ=255)
                                                                                                                                        ttGATGAAGTAAAAGCAGTACGGTGACGCGCGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTGAAATCCGCCCCCCGCAACCAATTATTGAACACCC‑‑TAAGGGGTGATTTTTTCTTTCTGGTCTCCCATa            >  3:171653/1‑150 (MQ=18)
                                                                                                                                        ttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaa           <  8:1179948/150‑1 (MQ=255)
                                                                                                                                        ttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaa           >  1:1558736/1‑150 (MQ=255)
                                                                                                                                        ttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑AAAAGGCTCTTTTATTGTTTCTGGTCTCCCATaa           >  4:1519240/1‑150 (MQ=17)
                                                                                                                                         tgatgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaa           >  3:283816/1‑150 (MQ=255)
                                                                                                                                         tgatgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGAAACCAATTATTGAACACCC‑‑TAACGGGGGTTTTTTTGTTTCTGGTCTCCCATaa           >  5:36141/1‑150 (MQ=255)
                                                                                                                                         tgatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACCGGGGTTTTTTTGTTTCTGGTCTCCCATaaa          >  8:1332440/1‑150 (MQ=255)
                                                                                                                                         tgatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAATGATCAACC‑‑TAACTCGTCTTTATGTGGATCCGGTCTCCCATaaa          >  3:342362/1‑150 (MQ=11)
                                                                                                                                         tgatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCCCAACCAATAATTTAACACCC‑‑TAACGGGGGTTTTTTTGTTCCTGGTGTccataata          >  7:1271940/1‑144 (MQ=14)
                                                                                                                                          gatgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTCTTTTTTTGTTTCTGGTCTCCCATaaaa         >  3:1407920/1‑150 (MQ=255)
                                                                                                                                           atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGtttttt                              >  4:1232813/1‑128 (MQ=255)
                                                                                                                                           atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGtttttt                              <  7:1234878/128‑1 (MQ=255)
                                                                                                                                           atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTGAACACCC‑‑TGACGCGTGTTTTTGTGTTTCTGGTCTCCCATaaaaa        >  2:2211/1‑150 (MQ=17)
                                                                                                                                            tgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCCACCAATTATTGAACAACC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        >  8:448900/1‑150 (MQ=255)
                                                                                                                                            tgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        >  5:854114/1‑150 (MQ=255)
                                                                                                                                            tgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        >  2:66394/1‑150 (MQ=255)
                                                                                                                                            tgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACC‑‑TAACGGGGGTTTATTTTTTTGGGGTCTCCCATaaaaacg      >  5:609787/1‑149 (MQ=17)
                                                                                                                                            tgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGATCACCA‑‑TGTCAGGGGTGTTGTTTTTAGTGGTCTCCCATagaaa        >  7:602867/1‑149 (MQ=11)
                                                                                                                                            atcacgaaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        <  4:957687/144‑1 (MQ=255)
                                                                                                                                             gaAGTAAAAGCAGTAGGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAACGTCGTCGGTTCAAATACGGACCCCTCAAGAATTTATTGAACACCC‑‑TAAGGGTTGTTTTATAGTTTATGGTCTCCGataaataa       >  3:233854/1‑150 (MQ=17)
                                                                                                                                               aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTGATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATTAAAAAgcg    >  6:1379423/1‑151 (MQ=255)
                                                                                                                                               aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcg    >  1:940683/1‑151 (MQ=255)
                                                                                                                                               aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTATCCAATAAAAAAgac    >  4:170967/1‑149 (MQ=255)
                                                                                                                                               aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTCGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcc    >  4:314582/1‑150 (MQ=255)
                                                                                                                                                gTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTGAAATCCGGCCCCCGCAGCCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcgc   >  4:1174015/1‑151 (MQ=255)
                                                                                                                                                gTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcgc   >  7:731023/1‑151 (MQ=255)
                                                                                                                                                 tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcgc   >  3:348177/1‑150 (MQ=255)
                                                                                                                                                 tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  7:1528610/1‑151 (MQ=255)
                                                                                                                                                 tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  6:62966/1‑151 (MQ=255)
                                                                                                                                                  aaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  7:299674/1‑150 (MQ=255)
                                                                                                                                                  aaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  5:464236/1‑150 (MQ=255)
                                                                                                                                                  aaaaGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  1:1559702/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                       
TCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TC‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCC‑‑TAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947447‑2947740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑