| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,901 | 0 | A | C | 31.2% | 189.6 / 55.8 | 208 | R661R (CGA→CGC) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base A (102/35); new base C (59/3); total (166/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.53e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 214 total aligned reads displayed.
CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC > NC_000913/1708753‑1709049 | cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGACCCTATTGCCCgcgc > 8:1417377/1‑151 (MQ=255) aagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCGGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAACGCCGCCGTCGCCGCCGCTATTGCCCGAGCCa > 3:594268/1‑150 (MQ=14) cgcccccggccgcccGCGCAAACCCGCCGTCGAAGCCGCTATTTCGCGCGCCAAAGCCCGCATCCTCGAACTGCAACTGGGTAATGCGGACACAGCACACCAGGTCGCTCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa < 1:1207915/138‑1 (MQ=2) ccccAGGCCGATCCCCGCAAACCCGCCGTTGTATCATCGATAGCCCGGGACAACCCACGCACTCTTGAACATCAAGAGGATAATGCGGATCCACACCAACATGGCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAg < 3:1265840/148‑1 (MQ=2) cGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACAGGGTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCCGCGGCTATTGACCgcgcgcaggcgaccaa > 3:1736423/1‑138 (MQ=14) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCACCGCGCGGAAGCTGGAACAGCACCAGGCTAATGCGGATACAGAAGATCAGGTGGCTCAGCGCAAAGCGGCCGTCGCCGCGGCTATTGCGCGGGCGAGcgcgcggcggcgggg > 8:1780895/1‑142 (MQ=2) gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGCGCAAACgcaaaaaaacccgac > 4:751459/1‑138 (MQ=11) cgccccgcccccGCCCAAGCCGCTATCGCCCGCGCCTATTCTATCAACCTGGAACAGCAACCGGATAATGCCTAGCCATAACAACATGTCGATCCGCGAAAAGCCGCCGTTGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc < 2:786499/145‑1 (MQ=255) cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAgcgcggatcgggggagcg > 3:1466203/1‑138 (MQ=14) aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTCGAAGCGGCTATTGCCCGCGCCAACGCCAGCAAAGGGGACCAGc > 8:1705708/1‑151 (MQ=14) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAATAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGCGCGAACGCGCTCCACCGCGCACAGc > 3:1682558/1‑150 (MQ=14) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAAAGCAACCGGCTAATGCGCAGCCAGAAGAACAGATTGATCCGCGCAAAGCTGCAGTATAAGCGACTATTGCACGACAAAAAGCAAGAAAACACGAACAGaaaa > 6:385314/1‑147 (MQ=17) cggttgAAGCCGCTATCGCCCCCGACAAAGGACGCAATCTGGAACACCAACAGGCTAATTCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc < 8:351449/146‑1 (MQ=11) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGCCGCGGCTATTGCCCGCGCGCACGCGAGAAAAGGGGCCCAGCACCCgggt > 2:1596829/1‑149 (MQ=11) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGGCGAAGCGGCGAGTGCGCGAGGCCACGCGCCGAACCGGGacgaggaagcgggg > 1:1159655/1‑138 (MQ=14) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCCCAAACCGGCCCAGCACCAGGCtc > 5:779697/1‑149 (MQ=14) gttaaGCAGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAAGACCAACAGGATAATCCCGACCCAGAACCACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTaa < 3:428009/148‑1 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGCGCAAAAGCCAAAAAACAGGCACAGCacaaggataaaac > 2:8071/1‑139 (MQ=14) gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGATGATGCCCGCTCCGAAGCGCGCTCACGGGACCCGCACGCGGCTGAGGCgg > 8:1180465/1‑151 (MQ=14) cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCACCCGGCTAATGCgg > 8:831867/1‑149 (MQ=255) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGCAGCGGCTATTGCCCGCGCCAACGCCAGCAAACGGGACCAGCAGCCGGCTGATGCGGAGc > 5:1193280/1‑151 (MQ=17) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCCAGCAAAGGCGCCCAGCAGCAGGCTAATGCGGAGcc > 5:549627/1‑151 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGCACAGCACCAGGCTAATGCGGAGcc > 6:84468/1‑151 (MQ=255) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGCCCGAGCGAACGCGCGCAAACGCGCACAGCACCAGGCTAATGCGGAGcc > 5:145000/1‑151 (MQ=17) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAACGCCCAAAAACCCGCCCAGCAACACGCAAATGCGGAGcc > 6:556415/1‑151 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGCCGCCGCTATTGCCCGCGCAAAAGCCCGCAAACCGGCCCAGCACCAGGCTCAAGCCGAGcc > 7:1380872/1‑151 (MQ=11) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGCGCGCAGGCCCGCAAACGGGACCAGCACCCGGATCAAGCGGAGccc > 8:230217/1‑150 (MQ=17) ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCCCAAGCCCGAAAACGGGAACAGCAACAGGCTAAtcagcgaac > 7:586421/1‑140 (MQ=14) gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAACGCCACAAAACCGGACCAGCACAAGGCTAAAGACGAGCAATAacaacact > 3:1209466/1‑149 (MQ=2) cccAAAGCCCGCAAGCTGTAAAATTTACAGGCTAATGCGGAACCAGAACAACAGGTAGATCAGCGCACAGCCGCCGTCTCAGCCTCTCATGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAgg < 3:898217/150‑1 (MQ=11) aaaaTCACGGAATCTGGAACAGCATCAGGATACTTCCGACCCAGAAAAAGTTGGCGATCCTCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGtt < 6:975478/150‑1 (MQ=11) aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGCAGCGGCTATTGCCCGCGCAAACGCCAGAAAAGCCGAACAGCAGCAGGATATTACCGAGCCAGAAGAACAGGtt > 6:726631/1‑150 (MQ=2) aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAACCGGGAACAGCACCAGGATAATACGGAGCCAGAAGAACAGGt > 6:996643/1‑149 (MQ=14) aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGAGCAAAGGCGCGCAAAGGCGCCCAGCAGCAGGCTGAAGCGGAGGCataagacctcttgg > 2:68450/1‑143 (MQ=9) gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTGGAAGCGGCTATGGGCCGAAGCGAGGCGAGGAAGCGGAGACAGCATGCGGCTATTGAGGTCGCCGAAGTACAGGTTGaa > 2:1034619/1‑149 (MQ=9) gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCCAAAGCCCAAAAACGCGCACAGCACAAGGATAAAGACGAGCCAGAACAACAAGTAGaa > 7:948103/1‑149 (MQ=2) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCACGGACGAGCGACCTGGAACAAAAAACGGATAAAGCGGGGCGAGAAGAACAGGTTCAGCcg > 7:1713678/1‑149 (MQ=9) cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCAAAAGCCAGCAAACCGGACCAGCACCCGGCTAATGAGGAGCCAGAAGACCACGTTCATCCgcgc > 3:70793/1‑151 (MQ=14) aaGCTGGAAGAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAACGCGCTCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAGCAGGTTCATCAgcgc > 8:559712/1‑150 (MQ=14) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCCAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCgcgc > 1:279571/1‑150 (MQ=255) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAGGCGCGCAAACGGGCACAGCACCAGGCTAATGCGGAGCCAGAAGATCAGGTTGATCAGCGCaa > 4:548607/1‑150 (MQ=14) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGACCAGCAACAGGCTAATGCGGATCCAGAAGAACACGTTGATCCGCGCaa > 7:402401/1‑150 (MQ=14) tGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGATCGCGCCCCGCAAAGCAGACCTCGAAGCCGCAATTGCACGAGCCACAGCGCGCAATATCGAAAAGAAAAAGGCTAATGCGGAGCCAGAAGATCGGGtggggcggggggaggg > 4:860063/1‑136 (MQ=2) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCACCCGGCTACTGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGc > 5:425818/1‑151 (MQ=14) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCGAAAGCGCAAAAACGGGAACAGCAACAGGCTCAAGCGGAGCAAGAAGAACACGTTGATCCCCGGaaatcg > 3:1645825/1‑148 (MQ=14) cccAACAGGCTAATGCCGACCCAGAACAACATTTGGATCCGCGCAAAGGCGCAGTCGAAGCCGCAATTTCCCTTGCGTAATGACGTAATCTGTAACATGATCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGt < 5:1288324/149‑1 (MQ=9) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCAGCGGCTATTGCCCGCACCACAGAACACAATCGGGAACAGAAACAGTCTAATGCGGAGCCAAAATCACAGGTTGATCCGAGCaaatatgaaaaac > 7:1640019/1‑141 (MQ=9) cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTAGCCGCGGc > 4:1405478/1‑151 (MQ=255) cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATACGGCCAAAGCTGCCGACGAAGCGGc > 1:1713915/1‑151 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCACGAGCAAAAGCCCGAAAACGCGAACAGCAAACGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGAAGCGGCt > 4:1325750/1‑151 (MQ=14) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTGGCAGCGGCt > 8:477334/1‑151 (MQ=255) tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTAtt > 8:578509/1‑151 (MQ=255) gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTGGCCGCGGCTATTg > 5:836152/1‑151 (MQ=17) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGccc > 8:1268141/1‑149 (MQ=255) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCAc > 8:811347/1‑151 (MQ=255) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTAGAAGCGGCTATTGCAcg > 6:793909/1‑151 (MQ=14) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg > 5:717345/1‑151 (MQ=255) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcg > 3:1406136/1‑149 (MQ=255) agaagaACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCACACAAGCACGAACAGCAACAGGATAATGCGGAGAAAGAAGAACAGTTGGATAAGCGCAAAGAGGCCGTTGAAGCGGATATTGCACgcgc > 2:1352866/1‑150 (MQ=2) acaccaccaccgcGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGcc < 1:192655/139‑1 (MQ=255) gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGcc > 1:812755/1‑150 (MQ=255) aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTTCACCGGCCAAAGAGCGCAATCGGGAACAGAAACTGCAGAATGGGGTACCAGAAGAACAGGTTGATAAGCGCAAAGCCGCCGTTGACGCGGCTAttcgaggggcctc > 8:1660479/1‑140 (MQ=2) aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCCa > 2:1280836/1‑150 (MQ=255) aacaacAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGGGGCGGAAGGCCAAACCTCTCACATCAACACGCTAATGACGAGCGAGAAGGACGGCTTGATCGGCGAAAAGCAGCCGTCGCGGCGGCtcgtgcgcggggggg > 8:928751/1‑137 (MQ=2) ccccccccgccccccGCCCCAACCCGCCGTCGAAGCCGCTATTGCCCTTTCCAAATCGCGCAACCTGGAACAGCAACAGGCTATTGCTGAGGCATAAGAACATGTTGTTGCGCGCTAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCaaa < 2:1075347/138‑1 (MQ=2) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAACGc > 6:1024951/1‑151 (MQ=255) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGTTTGATACGCGCAAAGCGGCAGTGGCCGCGGCTATTGCACGCGCAAAGGc > 7:1260811/1‑151 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCAAACGc > 6:114826/1‑151 (MQ=17) ccttgcggATCCCCGTAAAACCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt < 8:1084117/129‑1 (MQ=17) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGCTATTGCCCGCGCAAAGGc > 6:1626004/1‑150 (MQ=14) gTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCAAAAGCCAGCAAACGCGAACAGCACCAGGCTAATGCCGAGCCAGAAGAACACGTTGAACATCCCAAAGCAGCCTAAGCAGCGGCTATTCCACGCGCTAAAGCAcac > 2:333100/1‑148 (MQ=9) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAACGCCCGCaac > 8:1626578/1‑150 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTAGCCGCGGCTATTGCACGCGCCAACGCCCTCAAGc > 6:1217147/1‑151 (MQ=17) atccacgaaactcagccgTGGAATCAGCTATGGCCCGCGCAAAATCGCGCAAACTGGAACATCAACAGGCTAATGCGGACCCAGAACAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 5:230849/137‑1 (MQ=18) agacgcgCAAAGCCGCCTTCGCAGCCGAGATCCCACGAGCCAAAGCCCGCACTCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 3:1189708/148‑1 (MQ=14) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAACGCGGCCGTAGCCGCGGCTATTGCACGCGCGAACGCaaccaaacgc > 4:1025432/1‑142 (MQ=17) ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACCACCGAAAACGGTAAAAGAAACAAACAAATGCGGAGCCAGAAGAACAGGAGGATCCGCGCAAAGCAGAAGAAGAAGCCGCTATTGCCCGCGCCaagggcggaggggggg > 6:825513/1‑137 (MQ=2) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCCGCAAGCTGGAAc > 3:1614094/1‑150 (MQ=255) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAAGAAAGCTCGAAc > 6:488897/1‑150 (MQ=255) cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTACTGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCAAGCAACCGGGAAc > 6:1720560/1‑149 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCGAAAGCACGCaacggcgaacagc > 7:1161776/1‑140 (MQ=17) aaaGCCGCCGTCGAAGCCGCTATTGCAAGAGCCAAAGCGCGCAAACGGGAACAGAAACAGTCTAATGCGGAGCCAGAATAACAGGTTGATACGCTCAAAGCTCCAGTCGAAGCGGCTATTTCACGCGACAAAGCACGCAAGCTGGACCAGc > 7:1673685/1‑151 (MQ=17) cccccccccccaccccGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACCCCAACCGCCTAATCCCGAGCCACAAGAAACGGGAGATCCGCCCACAGCTGCCCGCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa < 8:74227/137‑1 (MQ=9) aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCac > 6:1369543/1‑150 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACCCAAGCTGGCACAGCagc > 1:1367111/1‑148 (MQ=255) ccgcccTCGAAGCCGCTATTGCCCGAGCCTAATATCGCAACGGGGAACAGCTACATGCTAATGCGGTTCCAGAAGATCAGGTTTATCCCCGCTATTCTGACGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa < 7:814863/151‑1 (MQ=9) cagccgtgccatccGCTATTGCCAGCTCCAAAGCCCGCAAACCGGAACAGCAACAGGAAAATCCCGACCCAGAACCCCAGGCTGATCCCCGCAAACCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa < 5:1486620/139‑1 (MQ=2) cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGACTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc > 5:104698/1‑149 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGAAAGCTCGAACAGCAACAgg > 1:1010971/1‑151 (MQ=255) ccccgcGACGCCGCTAGAGCCCGAGCCAAATATGGCACCCGCCAACCGCAACCGCCTAAGCCGCATCCAGAAGCACATCTGCAGCCGCGCATAGCGCCCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg < 1:687602/146‑1 (MQ=9) ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc > 1:1754398/1‑151 (MQ=255) cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTaa > 6:1069320/1‑150 (MQ=255) aaGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcg < 5:1711567/80‑1 (MQ=255) agCTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa < 7:1038483/46‑1 (MQ=255) gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc > 6:181615/1‑151 (MQ=255) tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc > 5:593381/1‑150 (MQ=255) tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCGAGCTGGAACAGCAACAGGCTAATGCGGTACCaga > 8:1695259/1‑150 (MQ=255) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAGGCACGCAACCAGGACCAGCAACAGGCTAATGCGGTACCagaaga > 2:842636/1‑150 (MQ=255) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAATGCACGCAAGCTGGAACAGCAGCAGGATAATGCGGTAGCagaag > 7:1440060/1‑149 (MQ=255) gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGAAc > 4:1604651/1‑150 (MQ=255) | CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC > NC_000913/1708753‑1709049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |