Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,708,910 | 0 | G | C | 23.0% | 359.4 / 20.3 | 209 | A664A (GCG→GCC) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
Reads supporting (aligned to +/- strand): ref base G (120/31); new base C (42/3); total (169/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.15e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 215 total aligned reads displayed.
GGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCC > NC_000913/1708763‑1709059 | cgccGATCCTCGCAAAGCCGCAGAGTAAGGAGCTATAGCCGTGGCCATAGCGAGCAACCTGGAACAGCTACAGGATAATTACGACGCAGAACACGATGTCGATCCCCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcgc < 6:801871/148‑1 (MQ=2) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCACCGCGCGGAAGCTGGAACAGCACCAGGCTAATGCGGATACAGAAGATCAGGTGGCTCAGCGCAAAGCGGCCGTCGCCGCGGCTATTGCGCGGGCGAGcgcgcggcggcgggg > 8:1780895/1‑142 (MQ=2) cgccccgcccccGCCCAAGCCGCTATCGCCCGCGCCTATTCTATCAACCTGGAACAGCAACCGGATAATGCCTAGCCATAACAACATGTCGATCCGCGAAAAGCCGCCGTTGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc < 2:786499/145‑1 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTCGAAGCGGCTATTGCCCGCGCCAACGCCAGCAAAGGGGACCAGc > 8:1705708/1‑151 (MQ=14) aaacagccgTACAAGCCTCTATTTCCCGGGCCAAATCACGCATGCTGTAACAGAATCTGTTTACTGCTGACGCAGAACAAGTTGTGGATCCTCGTAAATCTGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCa < 6:1713388/146‑1 (MQ=255) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCAGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCTCAAGCCAGCAAACGCGACCAGc > 7:1168378/1‑150 (MQ=14) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAAAAGTTGGATCAGCGCAACTCTGACGTCGAGTCAGATATTTCCCGAGCCAAAGCCCGCaacagcgtcaata > 5:1192943/1‑139 (MQ=2) aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCCGCGCGCACGCCCGCAAAcccgcccagcac > 4:988410/1‑140 (MQ=11) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAAAGCAACCGGCTAATGCGCAGCCAGAAGAACAGATTGATCCGCGCAAAGCTGCAGTATAAGCGACTATTGCACGACAAAAAGCAAGAAAACACGAACAGaaaa > 6:385314/1‑147 (MQ=17) cggttgAAGCCGCTATCGCCCCCGACAAAGGACGCAATCTGGAACACCAACAGGCTAATTCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc < 8:351449/146‑1 (MQ=11) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGCCGCGGCTATTGCCCGCGCGCACGCGAGAAAAGGGGCCCAGCACCCgggt > 2:1596829/1‑149 (MQ=11) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGGCGAAGCGGCGAGTGCGCGAGGCCACGCGCCGAACCGGGacgaggaagcgggg > 1:1159655/1‑138 (MQ=14) gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAGGCCCGCAAACCCGACCAGCACCAGGCtg > 3:1213385/1‑150 (MQ=14) cccgaccccgcgaccgCCCGGGCCACAGCCCGCAAGCTGGAACAGCAACAGCCTAATCCGGAGCCAGACGAACAGGTCGATCCGCCCTCCCCCGCCGTCGAAGCCGCTACCGACCTAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa < 8:1594328/136‑1 (MQ=2) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCCCAAACCGGCCCAGCACCAGGCtc > 5:779697/1‑149 (MQ=14) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCACGCGCAAAAGCCATCAAACGCGAACAGCacaacgatcat > 7:1658666/1‑140 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCGATGCGCGCAGACGGGGTCAGCAAGCGGCtcaggg > 8:1141557/1‑146 (MQ=17) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGCGCAAAAGCCAAAAAACAGGCACAGCacaaggataaaac > 2:8071/1‑139 (MQ=14) cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCACCCGGCTAATGCgg > 8:831867/1‑149 (MQ=255) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGCAAACGGGACCAGCAACAGGCTAATGCCGAGc > 5:595808/1‑151 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGCCGCCGCTATTGCCCGCGCAAAAGCCCGCAAACCGGCCCAGCACCAGGCTCAAGCCGAGcc > 7:1380872/1‑151 (MQ=11) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGCGCGCAGGCCCGCAAACGGGACCAGCACCCGGATCAAGCGGAGccc > 8:230217/1‑150 (MQ=17) aTTGCCCTTGCAAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCTAGCCAGAACAACAGTTCGATACGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCag < 7:1695165/151‑1 (MQ=17) ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCCCAAGCCCGAAAACGGGAACAGCAACAGGCTAAtcagcgaac > 7:586421/1‑140 (MQ=14) ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAGGCCCGCAAACGCGCACAGCAGCAGGCTAATCCGGAggccg > 5:582297/1‑146 (MQ=14) gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGCAAACGGGAACAGCAACAGGCTAATGCCGAGCCaga > 3:1707628/1‑149 (MQ=255) cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTGGACGCCGCTATTGCCCGCGCGCACGCCAGCAAAGCCGCCCAGCAGCAGGCTGATGAGGAGCCAGAAGATCAg‑g > 5:1730072/1‑149 (MQ=0) aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGAGCAAAGGCGCGCAAAGGCGCCCAGCAGCAGGCTGAAGCGGAGGCataagacctcttgg > 2:68450/1‑143 (MQ=9) gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCCAAAGCCCAAAAACGCGCACAGCACAAGGATAAAGACGAGCCAGAACAACAA‑GTAGaa > 7:948103/1‑149 (MQ=2) cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCAAAAGCCAGCAAACCGGACCAGCACCCGGCTAATGAGGAGCCAGAAGACCAC‑GTTCATCCgcgc > 3:70793/1‑151 (MQ=14) cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAAAGCCAGCAAACGCGAACAGCAACAGGCTAAAGCCGAGCCAGAAGAACAG‑GTACATCcgcc > 6:621699/1‑149 (MQ=14) aaGCTGGAAGAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAACGCGCTCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAGCAG‑GTTCATCAgcgc > 8:559712/1‑150 (MQ=14) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCCAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCgcgc > 1:279571/1‑150 (MQ=255) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAGGCGCGCAAACGGGCACAGCACCAGGCTAATGCGGAGCCAGAAGATCAG‑GTTGATCAGCGCaa > 4:548607/1‑150 (MQ=14) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGACCAGCAACAGGCTAATGCGGATCCAGAAGAACAC‑GTTGATCCGCGCaa > 7:402401/1‑150 (MQ=14) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGGGACCAGCAACAGGATAATGACGAGCCAGAAGAACAG‑GTTGAAACGCGCaa > 4:767508/1‑149 (MQ=14) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCACCCGGCTACTGCGGACCCAGAAGAACAG‑GTTGATCCGCGCAAAGc > 5:425818/1‑151 (MQ=14) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCGAAAGCCAGAAAACCGGCACAGCAGCAGGCTGATCCGGAGGCCGAAGTCCAT‑GAGGAGCCGCGCacggcggg > 7:1059407/1‑144 (MQ=2) cccAACAGGCTAATGCCGACCCAGAACAACATTTGGATCCGCGCAAAGGCGCAGTCGAAGCCGCAATTTCCCTTGCGTAATGACGTAATCTGTAACATGATCAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGt < 5:1288324/149‑1 (MQ=9) gCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACCGGAACAGAAAACGGCTAATGCGCAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGcgtcagtg > 4:1435035/1‑144 (MQ=14) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCGAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCAAGAAGAACAG‑GTTGATAGCCGCAAAGcgccagatgcc > 2:1049109/1‑141 (MQ=14) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTCGAAGc > 5:1408332/1‑151 (MQ=255) ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCg > 3:370146/1‑151 (MQ=255) cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATACGGCCAAAGCTGCCGACGAAGCGGc > 1:1713915/1‑151 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCACGAGCAAAAGCCCGAAAACGCGAACAGCAAACGGCTAATGCGGAACCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTGGAAGCGGCt > 4:1325750/1‑151 (MQ=14) tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTAtt > 8:578509/1‑151 (MQ=255) gCCGATCGAGAACAACAGGTCTATCCGCGCAAAGCCGCCGTCTAAGGCTCTATTGCTCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt < 6:87292/150‑1 (MQ=11) gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAG‑GTTGATCCGCGCAAAGCTGCAGTCGACGCGGCTATTg > 5:1666600/1‑151 (MQ=255) gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGCTCCGCGCAAAGCTGCCGTGGCCGCGGCTATTg > 5:836152/1‑151 (MQ=17) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCAc > 8:811347/1‑151 (MQ=255) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTTGCCGCGGCTATTGCAcg > 3:1624435/1‑151 (MQ=14) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTGGCCGCGGCTATTGCCcg > 3:968837/1‑151 (MQ=255) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAG‑GTAGATACTCGAAAAGCAGCAGTTGCAGAGGCTaatccccgcc > 6:225319/1‑142 (MQ=11) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg > 5:717345/1‑151 (MQ=255) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAACGCGGCAGTGGACGCGGCTATTGCCCgcgc > 6:1608641/1‑151 (MQ=14) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACTGCCCAAGCCCCCGGCTCATGCCTACCCTCAAGAAAAG‑CTAGATCCGAGGCACGCTGCCGTCGCAGAAGCTATTGCCcgcgg > 3:1266790/1‑150 (MQ=2) cAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGA‑ACAACAGAAGAGCGTCGTTGAGCGCAACGCTGTCTTCGAAGCggaaatagaccgagc > 6:1211488/1‑138 (MQ=2) agaagaACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCACACAAGCACGAACAGCAACAGGATAATGCGGAGAAAGAAGAACAG‑TTGGATAAGCGCAAAGAGGCCGTTGAAGCGGATATTGCACgcgc > 2:1352866/1‑150 (MQ=2) acaccaccaccgcGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGcc < 1:192655/139‑1 (MQ=255) gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGcc > 1:812755/1‑150 (MQ=255) aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTTCACCGGCCAAAGAGCGCAATCGGGAACAGAAACTGCAGAATGGGGTACCAGAAGAACAG‑GTTGATAAGCGCAAAGCCGCCGTTGACGCGGCTAttcgaggggcctc > 8:1660479/1‑140 (MQ=2) aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCCa > 2:1280836/1‑150 (MQ=255) aacaacAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGGGGCGGAAGGCCAAACCTCTCACATCAACACGCTAATGACGAGCGAGAAGGACGG‑CTTGATCGGCGAAAAGCAGCCGTCGCGGCGGCtcgtgcgcggggggg > 8:928751/1‑137 (MQ=2) acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACCGGCTAATCACGAGCCACAACAACAG‑GTTGATCATCGCAAAGCACCAGTCGCAGCCGCTATTGCACgcgcacac > 6:727795/1‑147 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAAAGCGGAGCCAGAAGACCAG‑GTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGCCCGCGCAAAGGc > 6:550055/1‑151 (MQ=17) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAACGc > 6:1024951/1‑151 (MQ=255) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTAGCCGCGGCTATTGCACGCGCGAAAGc > 6:833981/1‑151 (MQ=255) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCAAACGc > 6:114826/1‑151 (MQ=17) acaGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAGCAG‑GTGGAACCGCGAAAAGCTGCCGACCCACCGGCGATTGCCcgcgagaacgc > 3:1671337/1‑143 (MQ=14) gTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCAAAAGCCAGCAAACGCGAACAGCACCAGGCTAATGCCGAGCCAGAAGAACAC‑GTTGAACATCCCAAAGCAGCCTAAGCAGCGGCTATTCCACGCGCTAAAGCAcac > 2:333100/1‑148 (MQ=9) atccacgaaactcagccgTGGAATCAGCTATGGCCCGCGCAAAATCGCGCAAACTGGAACATCAACAGGCTAATGCGGACCCAGAACAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 5:230849/137‑1 (MQ=18) agacgcgCAAAGCCGCCTTCGCAGCCGAGATCCCACGAGCCAAAGCCCGCACTCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 3:1189708/148‑1 (MQ=14) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCGGGCGGGGAAGCGGCTAGTGCTGGCGGCCAGGCACGCTAGcgg > 5:1459736/1‑149 (MQ=14) accGCGCAAAGCCTCCGTCGAAGCCGATTTTGCTCTAGCGATAGCGCGCAATCTGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTg < 6:997662/150‑1 (MQ=14) cgcccccccccccgcGAAGCCGCTATTGCCCGAGCCAAAGCTCTCAAACGGGAACCGCAACAGGCTAATGCGGCTCCAGACGAACCC‑GTTGAGCCGCGCAAAGCTGCCGTCTAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc < 3:1509582/137‑1 (MQ=14) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGacc > 8:1235237/1‑148 (MQ=255) cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc > 6:995954/1‑149 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTGGAAGAGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc > 3:461782/1‑151 (MQ=255) cccccccccccaccccGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACCCCAACCGCCTAATCCCGAGCCACAAGAAACG‑GGAGATCCGCCCACAGCTGCCCGCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa < 8:74227/137‑1 (MQ=9) aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCac > 6:1369543/1‑150 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACCCAAGCTGGCACAGCagc > 1:1367111/1‑148 (MQ=255) ccgcccTCGAAGCCGCTATTGCCCGAGCCTAATATCGCAACGGGGAACAGCTACATGCTAATGCGGTTCCAGAAGATCAG‑GTTTATCCCCGCTATTCTGACGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa < 7:814863/151‑1 (MQ=9) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg > 8:1409976/1‑151 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGAAAGCTCGAACAGCAACAgg > 1:1010971/1‑151 (MQ=255) ccccgcGACGCCGCTAGAGCCCGAGCCAAATATGGCACCCGCCAACCGCAACCGCCTAAGCCGCATCCAGAAGCACAT‑CTGCAGCCGCGCATAGCGCCCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg < 1:687602/146‑1 (MQ=9) ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc > 1:1754398/1‑151 (MQ=255) gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc > 6:181615/1‑151 (MQ=255) tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCACAAGCACGCAAGCTCGAACAGCACCAGGCTAATCCGGTAcc > 2:1224380/1‑150 (MQ=25) tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCGAGCTGGAACAGCAACAGGCTAATGCGGTACCaga > 8:1695259/1‑150 (MQ=255) ggcccccgccccaccgcccAACCGGGAACAGCAACCGGCTAATGCGGATCCAGAACAACAG‑GTTGTTCCGCGCAAAGCTGGCTTGGATGCTGCTTTTGCACGGGGCTATGCACGCAAGGTGGAACAGCAACAGGCTAATGCGGTACCaga < 3:861496/136‑1 (MQ=9) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAGGCACGCAACCAGGACCAGCAACAGGCTAATGCGGTACCagaaga > 2:842636/1‑150 (MQ=255) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAATGCACGCAAGCTGGAACAGCAGCAGGATAATGCGGTAGCagaag > 7:1440060/1‑149 (MQ=255) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaaga > 3:143376/1‑150 (MQ=255) gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGAAc > 4:1604651/1‑150 (MQ=255) agcgataGCTCGCTAACGTTAACAGCAACCGTCTAATGATGAGTCAGAATATCAG‑TTTGAACCGCGCAAAGCTGGCGTCGAAGCGTCTATTGCACGAGCCAAAGCACGCAAGCTGGAACATCAACAGGCTAATGCTGTACCAGAAGAACa < 6:407529/144‑1 (MQ=17) aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGCCCAGCACCAGGCTAATGCGGACCCagaagacc > 8:427692/1‑147 (MQ=25) aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTACCAGAAGAACAGGTTg > 6:1231980/1‑151 (MQ=255) aGCACGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAGCAGGCTAAAGCGGTACCAGAAGAACAGGTTgc > 7:276247/1‑149 (MQ=37) gcgcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGAACAGGt > 4:1077906/1‑146 (MQ=255) cgcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGCCCAGCACCAGGATAATGCGGTACCAGAAGAACAGGTTGCTcc > 6:1067688/1‑151 (MQ=37) | GGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG‑GTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCC > NC_000913/1708763‑1709059 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |