Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,518,1500AT21.9% 641.9 / 62.2 335intergenic (‑34/+6)alaX/alaWtRNA‑Ala/tRNA‑Ala
Reads supporting (aligned to +/- strand):  ref base A (146/114);  new base T (32/41);  total (178/157)
Fisher's exact test for biased strand distribution p-value = 6.48e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 345 total aligned reads displayed.

AGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAACGGCAAAT  >  NC_000913/2518000‑2518300
                                                                                                                                                      |                                                                                                                                                      
      aaaaaaCCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGGCAGGGGTTGAGGGACGAGGTTTGCGGGGTGAAAAtttt                                                                                                                                                  >  8:1478213/1‑151 (MQ=17)
        aaaaCCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGCACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCGCCCGCAGGCGTTTAGGTACCAAGTTTGGGGGGGGCAAAATTtgg                                                                                                                                                >  1:560650/1‑151 (MQ=18)
        aaaaCCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTtgg                                                                                                                                                >  5:1021292/1‑151 (MQ=255)
        aaaaCCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTtgg                                                                                                                                                <  6:722857/151‑1 (MQ=255)
          aaCCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTtggtg                                                                                                                                              <  4:1123161/151‑1 (MQ=255)
            cccccGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGa                                                                                                                                            <  6:1708951/151‑1 (MQ=255)
              cccGCTTTGCAGCGAGGGTTGGAAA‑TTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCt                                                                                                                                         <  4:2017/151‑1 (MQ=255)
               cggCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCt                                                                                                                                         <  4:1330267/149‑1 (MQ=255)
                cGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTa                                                                                                                                        <  7:1580249/151‑1 (MQ=255)
                 gCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTaa                                                                                                                                       <  3:838632/151‑1 (MQ=255)
                 gCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTaa                                                                                                                                       <  1:1007654/151‑1 (MQ=255)
                   tttGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCCGATGCGTATAAGTACGAATTTTGCTGCGTGCTAAATTTGGTGGAGCTAAGc                                                                                                                                     >  5:29021/1‑151 (MQ=21)
                    ttGCAGCGAGGTTTGGAAATTTGGTGGCGCGTAGCGGGATCGAACCGCTGACCTCTAGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAg                                                                                                                                      <  4:700132/149‑1 (MQ=255)
                    ttGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAg                                                                                                                                      <  5:986301/149‑1 (MQ=255)
                    ttGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGACTATACGTTCCACGTTTGCGGGGTGCAAAATTTAGTTGAGCAAAGCg                                                                                                                                    >  7:496852/1‑151 (MQ=18)
                       cAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGGCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGa                                                                                                                                 <  2:353034/151‑1 (MQ=255)
                       cAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGGGAGGCGTTTAGGTACCAGGTTTCGTGGGTGCAAAATTTGGTTGAGCTAAGCgggt                                                                                                                                 >  5:1146141/1‑150 (MQ=18)
                       cAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGa                                                                                                                                 <  2:281683/151‑1 (MQ=255)
                        aGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGCGAAGAAATTCATTACGAATTTTCCTGCGGGCAAAAATTGATTGAGCAAAGATGGAt                                                                                                                                >  2:49214/1‑151 (MQ=14)
                        aGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCGCAGGGGTTTAGTTACCAATTTACCTGGGGGCTAAATTTCGTGGAGCTaccagggct                                                                                                                                >  3:1665419/1‑143 (MQ=14)
                         gCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCTCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAAATTGGTGGAGCTAAGCGGGATc                                                                                                                               <  6:143929/151‑1 (MQ=255)
                            aGGGTTGGAAATTTTGTTGATCTAATGGGGATCGAACCTCTGACCTCTTGCATGGCATGAAAGCGCTCTACAAGCTGAGCTATATCCACACGATTCCTTTACGTACCAAGCTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGaa                                                                                                                            <  6:1786362/151‑1 (MQ=255)
                            aGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCAGAGGGGTATAGGTACGAATTTACGTGCGTCAAAATTTTGGTTGAGCTAAgatgtctcgac                                                                                                                            >  1:221740/1‑141 (MQ=9)
                              ggttttaaaTTTGTTGGAGCTAAGGGTGATCGAACCGCGGACCTCTAGCATGCCATGCTAGCGATCTCCCACCTGTGCAATAGCCCCACTATGCGTTTACGTACCTAGTATGCTGGGTGGAAAATTTGGTGGAGCTAAGCGGGATCGAAcc                                                                                                                          <  6:518542/145‑1 (MQ=255)
                                ttGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGGCAGGCGAATACGGTCCAATTTACGGGGGGGCTAAATTTCGTGGAGCGAAGCGCGGTCGAGCCGc                                                                                                                        >  3:1308737/1‑151 (MQ=2)
                                  tgaacttttttggAGCTAATCGGGATCTATCCGCTGACCTCTTGCAGGGCATGCTAGTGCTGTCCCACCTGAGCTTAAGCCCCAGGATGCGTTTACGTACCTAGTTTCGTGGGTTGAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCt                                                                                                                       <  7:717094/140‑1 (MQ=19)
                                  tgAACTTTGGTGGAGCTAAGCGGGATCGAACCGGTGTCCTCTTGCAGGCCCTGCTAGCGGTGTCCCAGCTGTGCTATAGGCACACTATGCGTTTACGTACCAAGTTTGGTGGGTGGTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCt                                                                                                                       <  7:381276/149‑1 (MQ=21)
                                  ggAAATTTGGTGGATCGAAGCCGGATCGAACCGCTGACCTCTTGCAGGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGCTGGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCt                                                                                                                       <  5:172308/150‑1 (MQ=25)
                                    aaaTTTTTTGGATCTAATCGGGATAGAACCGCTGACCTCTTGCATGCCATGAAAGCGCTCTACCAGATGAGCTATAGCCCCACCATGCGTTTACGTCCCAAGTTTGCTGGGTTCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGAc                                                                                                                    <  5:723519/151‑1 (MQ=25)
                                    aaaTTTGGTGTAGCTAATCCGTTTATAACCTCTGTGCTCTTTCATGCAATGAAAGTGTTTTACAATATGTGCTATATCCAGACTATTATTTTACGTTCTTAGTTTGGTGGGTTGTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGa                                                                                                                     <  4:496956/150‑1 (MQ=2)
                                       tttGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTAAGTACCACGTTTCCTGGGGGCTAAATTTGGTGGCGCTCAGCGGGGTCGACCCGCTGACctc                                                                                                                 >  8:73946/1‑151 (MQ=18)
                                        ttGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCACAAGCTAATCATTACCAATTTACCTGCGTGCTAAATTTAGTTGAGCTAATCGGGATCGAACCGATGaacac                                                                                                                 >  4:75367/1‑146 (MQ=9)
                                        ttGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCAGCAGGGGTTTAGGTTCCAGGTTTCGGGGGTGCTAAATTTGGTGGAGCTACGCGGGATCGACCCGATTACctct                                                                                                                >  3:1580554/1‑151 (MQ=17)
                                          gctcgAGCAAAGCGCGAGCCCACCGCTGACCTCCTGGACGCCAGGCAAGCGCTCTCCCACCGGAGCTATAGCCCCACGATCCGTTTACGTCCCAAGCTTCCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCtt                                                                                                               <  8:1698038/146‑1 (MQ=25)
                                           gtggAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCCGAGGGGTTGAGGTTCGAGGTTAGGTGCGGGCTAAATTTCGTGGAGCGAGGAGGGCTCGAccccatgagctatagc                                                                                                             >  5:1431103/1‑138 (MQ=2)
                                             cgAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCAGAGGCGTTTAGGGACCAATTGTCCGGCGTGCAAAAATGGCTGGAGCTATGAGGTATCGAAGCgaacagctcaagaat                                                                                                           >  3:419965/2‑137 (MQ=9)
                                              caGCTAAGGCGGCTCGAACCGCGGAGCTCTTCCATGGCAGGCAAGCGCTCTCCCAGCTGAGCTAAACCCCCAGTCTGCGATTACGTCCCTAGTTTGGTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGcatg                                                                                                          <  1:1477893/150‑1 (MQ=21)
                                                  tAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCAAGAAGAGAAAAGTTACCAATTTTGCTGGGACCAAATTTTGGTGGAGCTAAGAAGGATCAAAAATCTGAACTCTTGcatgacat                                                                                                      >  6:372621/1‑151 (MQ=12)
                                                   aaGCTGGAGAGACCCGCTGACCTCTTGGATGGCATGAAAGCGGTCTCCAAGCTGAGCTATACCCCCACGATCCCTTTACGTCCCAAGCTTGGTGGGTTCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGcatgccat                                                                                                      <  5:1632513/150‑1 (MQ=21)
                                                   aaGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCCCGATGCGTTTCCGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGcctgcgatg                                                                                                     >  5:827/1‑151 (MQ=255)
                                                    aGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGGGAGGGGATTACTTTCGAAGTTTGGTGGGGGCTAATATTGCTTGAGCTACGATGTGTCGAACCGATCACCTCTTggctgagctgc                                                                                                    >  5:1241738/1‑141 (MQ=2)
                                                     gCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCa                                                                                                   <  5:1582767/151‑1 (MQ=255)
                                                       gtgATCGAACCGCTGACCTCTAGCATGCAATTCAAGCGCTCTCCCATCTGAGCTATAGCCAGACGCTTCCTTTACGTACCAAGTTTGCTGGGTTCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAg                                                                                                 <  7:1362375/149‑1 (MQ=25)
                                                           tCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCAAGATGCGTTTAAGTACCAAGTTAGCGGGGTGCAAAATTTGGTTGAGCTAAGCTGGGTCGACCCGCTGAACTCTTGCCTGCGATGCAAgcggg                                                                                             >  7:994947/1‑149 (MQ=25)
                                                            cGAACCGCTGACCTCTTGCATGGCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGct                                                                                             <  1:1359209/150‑1 (MQ=255)
                                                            agcacaggtGACCTCATACATGCCATCCAACCTCGCTACCAGCTGCGCTATACCCACACCAACCCAATACGCACCAAGTATGCTGGGTGGAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGctc                                                                                            <  1:1331129/143‑1 (MQ=12)
                                                             gAACCGGTGAGCTCTTTCATGGAATTATAGTGTTCTCCAATCTGAGCTATATGCACAGTATGATTTTACGTACCTAGTTTGGTGGGTTCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGctc                                                                                            <  7:119706/150‑1 (MQ=9)
                                                               aCCGCTGTCCTCTTTCCTGCAAGGCAAGCGCTCTACAATATGTGCTATAGGCCGACGATCCGTTTACGTTCCTTGTTTGCTGGGTGGAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTcc                                                                                         <  2:890602/151‑1 (MQ=18)
                                                               aCCGCGGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCTAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTcc                                                                                         <  6:866984/151‑1 (MQ=255)
                                                                ccGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGGGAGGGGTTGCGGTTCCACGTGTCGTGGGGGCTAAAATTCGTGGAGCTACCAGGGCTCGACGCGCTGAACTATTGTCTGGGATGCAAGGGGGCTccc                                                                                        >  3:674843/1‑151 (MQ=2)
                                                                 cgcgGACCTCTACCACGGCAGGCAAGCGCTCTCCAAGCTGAGCAATACCCCCACCATCCCATTACGGACGAAGGTTGCAGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCa                                                                                       <  3:1515430/151‑1 (MQ=18)
                                                                    tGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGAGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGAGGTATCCAACCGATGACCTCTTGCATGCAATGCAAGCGATCTCCCACCt                                                                                    >  6:1387665/1‑151 (MQ=37)
                                                                      aCCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGGGATGGGTTTAGGTACCAAGTTTGCTGGGTGCAAATTTTGGTGGAGCTACGCGGTATCGAACCGCTGAACTCTTGCATGCCATGCAAGCGTGCTCCCAGCTgc                                                                                  >  3:170401/1‑150 (MQ=37)
                                                                       ccTCTTGCAGGCCATGCAAGCGCTCTCCCACCGCAGCTATAGCCCCACGATCCGTTGACGTCCCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAg                                                                                 <  3:463007/151‑1 (MQ=25)
                                                                          attGCATGCCATGCAAGCGCTCTCCCAGCTCCGCTATAGCCAGACTATTCGTTTACGTTCCAAGTTTGCTGGGTGCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCta                                                                              <  6:620431/150‑1 (MQ=21)
                                                                             gcacggccggccaGCGGTCTCCCAGCTGAGCAAAAGCCCCACGATCACAATACGCCCGAAGTTTGGTGGGTGCTAAATTTGGTGGAGCTAAGCGGGATCGAAGCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAg                                                                           <  5:762957/139‑1 (MQ=14)
                                                                             gCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGCGATGCGTTTCAGTACCAAGTTACCTGGGTGCTAAATTTGGTGCCGCGAAACGGGATCGAACCGCTGACCTCATGCATGCCATGCAAGCGCTCTCCCACCTGAGCaatac                                                                           >  4:1658935/1‑150 (MQ=21)
                                                                             gCAGGCCATGCTAGAGCACTACCAGCTGAGCTATACCCAGACTATCCCTTTACGTTCCAAGTTTGGTGGGTTGTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCtata                                                                            <  2:98979/150‑1 (MQ=14)
                                                                                   catgcAAGCGCTCTCCCAGCTGAGCTATAGCCCCGCGATGGGTATCGGTACGAGGTTTGGGGGGGGCTAAATTTGGTGGCGCGACGAGGGCTCGACCCGCTGACCGCTTGTCTGGGATGAAAGCCCGCTCCCAGCGGCGCTATAGcacctt                                                                     >  1:1054253/1‑149 (MQ=255)
                                                                                    attaaaGCGCTCTACCATCTCAGCTATATCCACACCACCCCTTTACCTACCAAGTTTGGTGTGTTCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTc                                                                    <  5:1749096/147‑1 (MQ=17)
                                                                                    atgcAAGCGCTCTCCCAGCTGAGCTATAGCCCCCGGATGGGTTTAGGTACCAAGTTTGCGGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCCTGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCACGTc                                                                    >  5:51239/1‑151 (MQ=21)
                                                                                     tgcAAGCGCTCTCCCAGCTGAGCTATAGCCCCCACAAGCAATTAATTACCAAGTTACCTGCGTGATAAATTTGATGGAGCTAAGATGTATCAACCCGCTAACCTCAAGCATACCATGCAACCCATAACACAGCTCAACTATAGcaactta                                                                    >  7:1729688/1‑144 (MQ=255)
                                                                                      gcAAGCGCTCTCCCAGCTGAGCTATAGCCCCCGGATGCGTTTCCGTACGAAGTTTGGTGGGGGCAAAATTTGGTGGCGCTAAGCGGGATCGACCCGCTGACCTCTTGCGTGCGATGCAAGCGCTATCCATGATGAGCTATAGCACCGTccc                                                                  >  8:647290/1‑149 (MQ=255)
                                                                                      gcAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCa                                                                   <  1:883081/150‑1 (MQ=255)
                                                                                       cAAGCGCTCTCCCAGCTGAGCTATAGCCCCAGGATGGGTTTAGGTACCAAGTTTGCTGGGTGCTAAATTTGGTGGAGCTAAGATGGATCGAACCGCTGACCTCTTGCATTCGATCCAAGCGCTATACCAGCTGAGATATAGCACCTTAACg                                                                 >  3:1408136/1‑151 (MQ=21)
                                                                                         aGCGCTCTCCCAGCTCAGCTATAGCCCGACGATGCGTTTACGTACGAAGTTTCCTGGGTGCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTa                                                               <  2:576547/151‑1 (MQ=255)
                                                                                                  caatcTGAGCTATAGCCACACTATGAGTTTACGTACGAAGTTTGCTGGGTTGAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTc                                                      <  6:958412/147‑1 (MQ=18)
                                                                                                   cAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCg                                                     >  7:841807/1‑151 (MQ=255)
                                                                                                      cTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGCCCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGt                                                  >  2:1019163/1‑151 (MQ=255)
                                                                                                        gAGCTATAGCCCCACGATCCGTTTACGTACCTAGCTTGGTGGGTTGAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGTCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTg                                                <  5:220964/151‑1 (MQ=21)
                                                                                                          gCTATAGGCACACTATGCGATTACGGGCGAAGTTTGGTGGGTTCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGtt                                                 <  8:1337478/148‑1 (MQ=18)
                                                                                                           cTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACg                                             >  3:949324/1‑151 (MQ=255)
                                                                                                               aggcccACGATGAGTTTACGAACCTAGGTTCGTGGGTTCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGggcg                                         <  8:826400/148‑1 (MQ=18)
                                                                                                                  cccACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGggcggc                                       >  3:269584/1‑150 (MQ=255)
                                                                                                                    cACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGcatc                                    >  5:429625/1‑151 (MQ=255)
                                                                                                                     agtcttattttACGTTCGATGTTTGGTGGGTTGTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGcatca                                   <  2:1314567/143‑1 (MQ=18)
                                                                                                                     aggattattttACGTTCGTAGTTTGGTGGGTTCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGcatca                                   <  7:1056964/143‑1 (MQ=18)
                                                                                                                          gCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATg                               >  1:751007/1‑150 (MQ=255)
                                                                                                                          acgattACGTACGAAGGTTCGTGGGTTGTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGa                              <  5:1248255/147‑1 (MQ=18)
                                                                                                                           cGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGa                              >  8:397625/1‑150 (MQ=255)
                                                                                                                            gTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAAt                            >  4:1526491/1‑151 (MQ=255)
                                                                                                                             tttACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAAtt                           >  4:1243387/1‑151 (MQ=255)
                                                                                                                              ttACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTc                          >  1:35911/1‑151 (MQ=255)
                                                                                                                              ttACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTc                          >  5:468081/1‑151 (MQ=255)
                                                                                                                               tACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTcc                         >  1:1192197/1‑151 (MQ=255)
                                                                                                                               tACGTACCAAGGTTGCTGGGTTCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTc                          <  8:608583/150‑1 (MQ=255)
                                                                                                                               tACGGACCTAGGTTGCTGGGTTCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTc                          <  2:1388809/150‑1 (MQ=255)
                                                                                                                                 cGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGc                       >  8:1083143/1‑151 (MQ=255)
                                                                                                                                    aCCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGACCCGCTGACCTCTTGCATGCCATGCAAGCGCGCTCCCAGCTGAGCTATAGCCCCGTCACGTACAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCg                    >  3:347413/1‑151 (MQ=255)
                                                                                                                                     ccAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGCCCTCTTGCATGCCCTGCAAGCGCTCTCCCCGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCg                    >  4:923527/1‑150 (MQ=255)
                                                                                                                                            tGCTCGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTCAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGATCACGGGCGGCATCATATCAAATCCACCCGAATGtctc            >  4:314367/1‑151 (MQ=21)
                                                                                                                                            gcgagggTGCCAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTc            <  3:1156330/147‑1 (MQ=255)
                                                                                                                                             gCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTc            >  2:1181498/1‑150 (MQ=255)
                                                                                                                                              gtGGGTGCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGGATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGATTGTCGAGTTGACGGGCGTCATCATATGAATTCCGCCCGAATGTGTCaa          <  5:373301/150‑1 (MQ=255)
                                                                                                                                              cTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCa           >  3:785332/1‑150 (MQ=255)
                                                                                                                                               tGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAAc         >  6:1107943/1‑151 (MQ=255)
                                                                                                                                                 gttGCTAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAACg        <  5:1382563/148‑1 (MQ=255)
                                                                                                                                                    gCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAACGGCa     >  8:283113/1‑150 (MQ=255)
                                                                                                                                                    gCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAACGGCa     >  1:1582646/1‑150 (MQ=255)
                                                                                                                                                     cAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAACGGCaa    >  6:1547354/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
AGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGGCATCATATGAATTCCGCCCGAATGTGTCAACGGCAAAT  >  NC_000913/2518000‑2518300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑