Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,4670AC25.2% 349.2 / 135.6 151intergenic (+4/‑30)metZ/metWtRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (13/100);  new base C (0/38);  total (13/138)
Fisher's exact test for biased strand distribution p-value = 3.91e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.65e-01

Only 100 of 204 total aligned reads displayed.

CCAAATCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTG  >  NC_000913/2947317‑2947605
                                                                                                                                                       |                                                                                                                                           
ccAAATCCGTGATCGGGGT‑ATAAAAACGGTTGCATGAAAACTCGATCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                             <  3:335485/151‑1 (MQ=255)
 cAAATCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACTCTAGGTGAGTATAGTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTat                                                                                                                                            <  2:720228/151‑2 (MQ=255)
 cAAATCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaa                                                                                                                                            <  1:1598151/151‑1 (MQ=255)
  aaaTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCGCGCAACCAATTatt                                                                                                                                           >  7:1178319/1‑149 (MQ=255)
  aaaTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatt                                                                                                                                           >  1:216043/1‑149 (MQ=255)
  aaaTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaaa                                                                                                                                           <  8:779468/151‑1 (MQ=255)
   aaTCGGTGATCTGGTT‑AAAAAAAAGGTTGCATGAAAACGATAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                          <  6:1791083/151‑4 (MQ=21)
   aaTCCGGGCGCGGGCT‑AAAAACCAGCTGGAATCAAAACCCGAGCGGAGTATACTCCGCCTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                          <  3:138273/151‑4 (MQ=14)
    aTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAATCGCGAGCTGAGTATAGTGCGCATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                         <  4:1694297/151‑1 (MQ=255)
    aTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                         <  1:1145914/151‑1 (MQ=255)
    aTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                         <  1:402909/151‑1 (MQ=255)
    aTCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                         <  8:1710248/151‑1 (MQ=255)
    aTCCGTGATCGGGGT‑AAAAAAAAGGCTGCATGAAAACGCTAGCGGAGTATAGTCCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattga                                                                                                                                         <  8:1149921/151‑5 (MQ=255)
     tCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                        >  1:633584/1‑151 (MQ=255)
     tCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAttt                                                                                                                                        >  3:856044/1‑151 (MQ=255)
      ccGTGATCGGGTT‑AAAAAACAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAttt                                                                                                                                        <  1:1028385/150‑1 (MQ=255)
      ccGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAttt                                                                                                                                       <  4:1357833/151‑1 (MQ=255)
       ggTGATCGGGGT‑AAAAAAAAGGGGCAATGAAAACGCTATCGGAGTATAGTCCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                             <  5:1489656/143‑1 (MQ=18)
       cGTGATCTGGCT‑AAAACAAAGGTTGCAAGAAAACTATATCGTAGTATACTTCGCATACACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtga                                                                                                                                     <  6:1179217/151‑1 (MQ=14)
       cGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaac                                                                                                                                       >  6:1532123/1‑144 (MQ=255)
       cGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaa                                                                                                                                       >  6:26383/1‑144 (MQ=255)
       cGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaatgaac                                                                                                                                       >  6:580942/1‑145 (MQ=255)
       cGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtg                                                                                                                                      <  6:1584033/151‑1 (MQ=255)
       cGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAAttt                                                                                                                                       >  6:1014738/1‑150 (MQ=255)
       cGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAAGCTCGCAAGCGCGTCCAATTAATAtttt                                                                                                                                      >  7:808201/1‑150 (MQ=25)
        gTGATGGTGTT‑AAAAAAAAGGCTGCATGAAAAATCGATCGTAGTATAGTTCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                                    <  6:1500909/151‑1 (MQ=14)
        gTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacac                                                                                                                                     >  1:1751050/1‑143 (MQ=255)
        gTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtga                                                                                                                                     <  3:272513/151‑1 (MQ=255)
         ttatgtggct‑AAAAATAAGGTGGCATGAATTAGATATCGTTGTATTGTCCGAATACACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                                    <  7:338435/141‑1 (MQ=2)
         ggATCGGCGT‑AAAAACAAGCCTGCATCAAAACCCGATCGCAGTATACTCCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgatg                                                                                                                                   <  8:35756/150‑1 (MQ=14)
          gATCGTGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatg                                                                                                                                   <  7:850530/151‑1 (MQ=255)
          gATCGTGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgat                                                                                                                                    <  1:926882/150‑1 (MQ=255)
          gATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatg                                                                                                                                   <  6:831541/151‑1 (MQ=255)
          gATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatg                                                                                                                                   <  4:172231/151‑1 (MQ=255)
          gATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgat                                                                                                                                    <  8:1353384/150‑1 (MQ=255)
          gATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgat                                                                                                                                    <  8:572065/150‑1 (MQ=255)
           gagcgtctaaaaaaaacCGCTGCAGGAATACCCAATCGCAGAATACTCCGCCTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgatga                                                                                                                                  <  3:1658966/142‑1 (MQ=2)
           atgttgtt‑AAAATTAAGGTTGCATGAAATATATATCGTTGTATTGTTCGATTCCTCTGTCGCGGGGTGGATCAGGCTTGTAGCTCGTCGGGCTCATAACGCGAAGGTCGTCTGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGaa                                                                                                                                 <  6:1673071/144‑1 (MQ=2)
           atggtgtt‑AAAAAACAGGTTGCATGAAAACGCGAGCGCAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgatga                                                                                                                                  <  3:1027691/143‑1 (MQ=18)
           aTCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatga                                                                                                                                  <  6:662580/151‑1 (MQ=255)
           aTCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTAAAATttgttg                                                                                                                                   >  1:994132/1‑150 (MQ=255)
            gcGGGGT‑AAAAAAAAGGTTGCATGAAAACTCGAGCGGAGTATAGTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAg                                                                                                                                <  2:1231721/150‑1 (MQ=255)
             gggggT‑AAAAAAACCGGTGCAGGAAAACGCCATCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGt                                                                                                                               <  1:615931/150‑1 (MQ=17)
             gggcct‑AAAAAACAGGTTGAATGAAAACACGAGCGTAGTATACTTCGACTCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGt                                                                                                                               <  8:117938/146‑1 (MQ=14)
             cGGGGTAAAAAAAAAGGTTGAATGAAAAAGCGAGCGGAGTATAGTGCGCATCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccct                                                                                                                                  <  4:1064547/150‑12 (MQ=17)
             cGGGGT‑AAAAATAAGGGTGCATGAATACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacacccta                                                                                                                                 <  4:1211167/150‑13 (MQ=17)
              ggggT‑AAAAAAAAGGTGGCATGAAAACGCGAGCGGTGTATAGTGCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccctaac                                                                                                                               <  8:846124/151‑15 (MQ=17)
               gggT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑a                                                                                                                             <  5:1797785/151‑1 (MQ=255)
                ggT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aa                                                                                                                            <  3:1074535/151‑1 (MQ=255)
                ggT‑AAAAAAAAGGGTGAATGAAAAATCGATCGGAGTATATTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaa                                                                                                                           <  7:359268/151‑1 (MQ=17)
                 gT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                           <  4:1587658/151‑1 (MQ=255)
                 gT‑AAAAAAAAGGGTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                           <  7:1541723/151‑1 (MQ=255)
                  ttataattaaGGTTGAATGAAATAGCTTGAGTAGAATATTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaa                                                                                                                           <  4:311379/142‑1 (MQ=11)
                    aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                          <  1:1318009/150‑1 (MQ=255)
                    aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGc                                                                                                                         <  5:678433/151‑1 (MQ=255)
                    aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGc                                                                                                                         <  7:1362646/151‑1 (MQ=255)
                     aaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCa                                                                                                                        <  8:542579/151‑1 (MQ=255)
                     aaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTAAT‑AAGT‑aaaagc                                                                                                                        >  2:1088459/1‑147 (MQ=255)
                     aaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGGGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCa                                                                                                                        <  4:451999/151‑1 (MQ=255)
                      aaaataGGTTGCATGAATACGCGAGGTGAGTATAGTGCGGATCCACGGACGCGGGGTGGAGCAGCCTGTTAGCTCGTCGGGCTCATAACGGGAAGGTCGTCGGTTCATATCCGGACCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAg                                                                                                                       <  2:1636296/151‑1 (MQ=18)
                      aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGCCGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAg                                                                                                                       <  2:1021697/151‑1 (MQ=255)
                      aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccctaac                                                                                                                               >  5:313604/1‑130 (MQ=255)
                        aaaaGGTTGCATGAAAACGCGAGCGCAGTATAGTGCGACTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTa                                                                                                                     <  8:1200827/151‑1 (MQ=14)
                         aaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTAc                                                                                                                    <  1:357147/151‑1 (MQ=255)
                         aaaGGATGAATGAAAAATCGAGAGGAGTATAGAGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTAc                                                                                                                    <  8:1215501/151‑1 (MQ=11)
                          aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACg                                                                                                                   <  5:815082/151‑1 (MQ=255)
                            ggctGCATGAAATCGCGAGCGCAGTATAGAGGGATTCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGt                                                                                                                 <  6:1413467/148‑1 (MQ=1)
                            ggTTGCATGATAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATTACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGt                                                                                                                 <  5:1091545/151‑1 (MQ=255)
                            ggTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGTGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTGAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGt                                                                                                                 <  7:921063/151‑1 (MQ=255)
                             gTTCCATGAAAAAGCGAGCGGAGTATACTTCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattga                                                                                                                                         <  5:1399497/127‑5 (MQ=17)
                               tgaaTGAAAAATAGATCGTAGTATAGTGCGAATCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGa                                                                                                               <  6:1638913/147‑1 (MQ=11)
                               tGCATGAAAACTATATCGTAGTATATTCCGCTTCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGa                                                                                                               <  4:223158/150‑1 (MQ=11)
                                gaaggaagtcgagtgCGTAGTATTGTGGGCTTCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcg                                                                                                             <  5:1138516/137‑1 (MQ=11)
                                gCATGAAAACTATAGCGTAGTATAGTGCGAATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcg                                                                                                             <  4:601378/151‑1 (MQ=11)
                                 cATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaac                                                                                                                                       >  4:536843/1‑119 (MQ=255)
                                 cATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                          >  2:934877/1‑119 (MQ=255)
                                  accgatcttagAGCGGAGTATTGTGCGACTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgcg                                                                                                           <  8:1500623/141‑1 (MQ=11)
                                    gAAATCGCGAGCGGAGTATAGGGCGCATCGACGGACGGGGGGGTGAGCAGGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTGCAAATGCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑ATAGCAGTACGGTGACGCggg                                                                                                         <  8:892124/151‑1 (MQ=18)
                                    gAAAACGCGTTGGTAGTATTCTGCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCggg                                                                                                         <  3:759568/151‑1 (MQ=11)
                                    gAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTTGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCggg                                                                                                         <  8:1380025/151‑1 (MQ=255)
                                    gAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCgg                                                                                                          <  3:232605/150‑1 (MQ=255)
                                    gAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCgg                                                                                                          <  6:1384594/150‑1 (MQ=255)
                                      aaaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGt                                                                                                       <  3:447654/151‑1 (MQ=255)
                                       aaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattaaacac                                                                                                                                     >  1:950312/1‑113 (MQ=255)
                                       aaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattaaacac                                                                                                                                     <  2:948561/121‑9 (MQ=255)
                                       aaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTg                                                                                                      <  3:184405/151‑1 (MQ=255)
                                        aCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTgg                                                                                                     <  6:685440/151‑1 (MQ=255)
                                         cgcgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGa                                                                                                    <  5:1328260/151‑1 (MQ=255)
                                          gcgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGag                                                                                                   <  5:1728651/151‑1 (MQ=255)
                                          gcgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGag                                                                                                   <  4:351698/151‑1 (MQ=255)
                                            tagagtaGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaat                                                                                                                                          <  2:747829/105‑2 (MQ=255)
                                            gAGCGGAGTATAGTGCGCATCCTCTGACGCGGGGTGTTGGAGCGTGGTAGCTGGTCGCGCTCATATCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCTCAACGAATTAAAATTTGATGAAGT‑ACAGCAGTACGCTGACGCGGGGTGGagca                                                                                                 <  2:337645/151‑1 (MQ=17)
                                            gAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagca                                                                                                 <  5:473110/151‑1 (MQ=255)
                                             cgCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTAATAACCCGAAGGTCTTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCATTACGGTGACGCGGGGTGGagcag                                                                                                <  6:447107/150‑1 (MQ=255)
                                             aGCGTAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacacc                                                                                                                                    <  3:1539435/116‑10 (MQ=255)
                                                  aGTATAGTGCGCATCCACGGACGCGGGGGGGAGCAGCCTGGTAGCTCGTCGCGCTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGCTGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTgg                                                                                           <  3:526951/151‑1 (MQ=255)
                                                   gTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGt                                                                                          <  5:396704/151‑1 (MQ=255)
                                                     ataGTCCGCATACCCTGACGCGGGGTGGAGTAGGCTTGTAGGTCGTGGGTCTCATAACCCTAAGGTCGTCGGTTGTAATCCGTCCCCCGCAACCAATTAAACTTTGCTGAAGT‑AACGCAGTACGGGGACGCGGGGTGGAGCAGCCTGGTa                                                                                         <  7:1287988/150‑1 (MQ=14)
                                                                                                ctgcgGCCTCATAACCCGAAGCTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAACTTTGATGAAGT‑AACGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATcc                                                <  7:504993/145‑1 (MQ=255)
                                                                                                                                           cctcAACGAATTACACTTTGATGAATT‑CTCGGAATACCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTg  <  5:1016694/148‑1 (MQ=14)
                                                                                                                                                       |                                                                                                                                           
CCAAATCCGTGATCGGGGT‑AAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTG  >  NC_000913/2947317‑2947605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑