BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,557	Δ120 bp	intergenic (‑56/‑237)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673557	1673676	120	472 [0]	[0] 472	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673556	0 (0.000)	465 (1.140)	218/296	0.0	100%	intergenic (‑55/‑357)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673677 =	0 (0.000)	465 (1.140)	218/296	0.0	100%	intergenic (‑176/‑236)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 472 total aligned reads displayed.

GCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTC  >  NC_000913/1673406‑1673706

       cccTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtaga                                                                                                                                                  >  6:960509‑M1/1‑144 (MQ=255)

           cACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaata                                                                                                                                             <  8:1072996‑M1/151‑12 (MQ=255)

               gACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgt                                                                                                                                         >  1:976208‑M1/1‑136 (MQ=255)

                 cGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcc                                                                                                                                       <  4:499295‑M1/151‑18 (MQ=255)

                     cGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaa                                                                                                                                   <  6:1407545‑M1/151‑22 (MQ=255)

                        ccATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaa                                                                                                                                <  5:951180‑M1/151‑25 (MQ=255)

                              cATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtc                                                                                                                          >  4:883925‑M1/1‑121 (MQ=255)

                              cATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgt                                                                                                                           <  6:1022319‑M1/150‑30 (MQ=255)

                                 tgagtttgtaccggtAATTTCTGTAGCAATAGCGAGACCTAATAAAATCCAATTAATATAGATTGTCTTTCTGCTGCTAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcga                                                                                                                        <  1:296343‑M1/143‑33 (MQ=255)

                                 tGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcca                                                                                                                        <  6:878174‑M1/150‑33 (MQ=255)

                                     aGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataata                                                                                                                   <  5:1068514‑M1/151‑38 (MQ=255)

                                     aGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataata                                                                                                                   <  5:1184021‑M1/151‑38 (MQ=255)

                                     aGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataat                                                                                                                    >  3:1094762‑M1/1‑114 (MQ=255)

                                        gTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatatta                                                                                                                <  1:591991‑M1/151‑41 (MQ=255)

                                         tACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                               >  8:212544‑M1/1‑110 (MQ=255)

                                          aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                               >  8:656401‑M1/1‑109 (MQ=255)

                                           ccGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattaca                                                                                                              >  5:1427198‑M1/1‑108 (MQ=255)

                                            cGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaat                                                                                                            <  8:272635‑M1/151‑45 (MQ=255)

                                               tAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattat                                                                                                         >  7:1446174‑M1/1‑104 (MQ=255)

                                               tAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaatta                                                                                                          >  1:1454357‑M1/1‑104 (MQ=255)

                                                aaTTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattat                                                                                                         <  5:576014‑M1/150‑48 (MQ=255)

                                                aaTTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGAAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattctccataatattacaattatc                                                                                                        >  4:339264‑M1/1‑103 (MQ=255)

                                                   ttCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccg                                                                                                      <  2:695786‑M1/150‑51 (MQ=255)

                                                   ttCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccg                                                                                                      <  2:1126183‑M1/150‑51 (MQ=255)

                                                   ttCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccg                                                                                                      <  6:277526‑M1/150‑51 (MQ=255)

                                                        tAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgt                                                                                                >  3:293100‑M1/1‑95 (MQ=255)

                                                          gCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttg                                                                                              <  4:1611514‑M1/151‑59 (MQ=255)

                                                           cAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgc                                                                                             <  2:1580849‑M1/151‑60 (MQ=255)

                                                            aaTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgct                                                                                            >  2:170958‑M1/1‑91 (MQ=255)

                                                            aaTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgct                                                                                            >  6:670782‑M1/1‑91 (MQ=255)

                                                             aTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgctt                                                                                           <  7:82653‑M1/151‑62 (MQ=255)

                                                               aGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctcaacaaattgtccataatattacaattatccgcagtgttgcttct                                                                                         >  1:716355‑M1/1‑88 (MQ=255)

                                                                gCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctc                                                                                        >  7:1099581‑M1/1‑87 (MQ=255)

                                                                 ccAGACCTAATAAAATCCAATAAATATACATTCTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcg                                                                                       <  1:1020969‑M1/151‑66 (MQ=255)

                                                                  cAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgt                                                                                      >  7:350242‑M1/1‑85 (MQ=255)

                                                                   aGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtc                                                                                     <  4:602759‑M1/151‑68 (MQ=255)

                                                                    gACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtc                                                                                     >  8:588944‑M1/1‑83 (MQ=255)

                                                                      ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatc                                                                                  <  2:402844‑M1/151‑71 (MQ=255)

                                                                      ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatc                                                                                  >  4:724185‑M1/1‑81 (MQ=255)

                                                                       cTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcg                                                                                 >  5:1222310‑M1/1‑80 (MQ=255)

                                                                            aaaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggat                                                                            <  2:978818‑M1/151‑77 (MQ=255)

                                                                             aaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatg                                                                           >  1:1604187‑M1/1‑74 (MQ=255)

                                                                             aaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatg                                                                           >  6:757715‑M1/1‑74 (MQ=255)

                                                                             aaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatg                                                                           >  2:1510074‑M1/1‑74 (MQ=255)

                                                                               aTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgat                                                                         >  7:1144761‑M1/1‑72 (MQ=255)

                                                                                 ccAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataa                                                                       <  1:1232530‑M1/151‑82 (MQ=255)

                                                                                   aataaataTACGTTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataatt                                                                     >  5:737386‑M1/1‑68 (MQ=255)

                                                                                   aataaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataatt                                                                     <  5:470210‑M1/151‑84 (MQ=255)

                                                                                      aaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtc                                                                  <  8:1276969‑M1/151‑87 (MQ=255)

                                                                                      aaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtc                                                                  >  3:1371610‑M1/1‑65 (MQ=255)

                                                                                      aaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtc                                                                  >  3:1519206‑M1/1‑65 (MQ=255)

                                                                                      aaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtc                                                                  <  3:529932‑M1/151‑87 (MQ=255)

                                                                                      aaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgt                                                                   <  5:28306‑M1/150‑86 (MQ=255)

                                                                                       aataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcc                                                                 <  5:80763‑M1/151‑88 (MQ=255)

                                                                                        atatACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcct                                                                >  8:1384407‑M1/1‑63 (MQ=255)

                                                                                        atatACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcct                                                                >  5:1001046‑M1/1‑63 (MQ=255)

                                                                                            aCATTGTGCTTCTCCTGCAAGAGTATTATTTTATTTTTCGCTTAATTCAGGGAAAGCAAtgtagaaaataacgtcctgcacaacttgtccataatattactattatccgcagtgttgcttctcgtcatcgcggatgttaattgtcctcgg                                                             <  1:1143188‑M1/150‑92 (MQ=255)

                                                                                            aCATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcgg                                                             <  3:428125‑M1/150‑92 (MQ=255)

                                                                                            aCATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcgg                                                             <  4:247656‑M1/150‑92 (MQ=255)

                                                                                                tGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGACACCAAtgtagaaaataaagtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgattattgtcctcggtagtt                                                        >  8:153572‑M1/1‑55 (MQ=255)

                                                                                                 gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttg                                                       >  8:1172726‑M1/1‑54 (MQ=255)

                                                                                                 gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttg                                                       <  3:357690‑M1/151‑98 (MQ=255)

                                                                                                 gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttg                                                       <  7:1356623‑M1/151‑98 (MQ=255)

                                                                                                 gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttg                                                       <  3:1041770‑M1/151‑98 (MQ=255)

                                                                                                 gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagtt                                                        <  6:514519‑M1/150‑97 (MQ=255)

                                                                                                   ccTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaa                                                     <  5:373367‑M1/151‑100 (MQ=255)

                                                                                                       ctcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacg                                                 >  1:403770‑M1/1‑48 (MQ=255)

                                                                                                        tcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgc                                                >  7:510350‑M1/1‑47 (MQ=255)

                                                                                                         ccTGCAAGAGAATTATTTTAATTATCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacac                                                  <  1:807726‑M1/148‑103 (MQ=255)

                                                                                                             cAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgat                                           >  8:462323‑M1/1‑42 (MQ=255)

                                                                                                               agagAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgattt                                         >  1:453402‑M1/1‑40 (MQ=255)

                                                                                                                 agaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgt                                       >  8:1436126‑M1/1‑38 (MQ=255)

                                                                                                                 agaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatactaagtgttgcttctcgtcatcgcggatgataattgtcatcggtacttgaacacgactgatttgt                                       >  2:763548‑M1/1‑38 (MQ=255)

                                                                                                                  gaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgta                                      <  6:1146298‑M1/151‑115 (MQ=255)

                                                                                                                   aaTTATTTTAATTTTCGCTTAATTCAGGGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtat                                     >  3:879701‑M1/1‑36 (MQ=255)

                                                                                                                      tattTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                                  >  1:1476772‑M1/1‑33 (MQ=255)

                                                                                                                         tttAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatag                                <  1:220899‑M1/150‑121 (MQ=255)

                                                                                                                           tAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                             >  7:425362‑M1/1‑28 (MQ=255)

                                                                                                                            tatTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                             <  2:1333813‑M1/149‑124 (MQ=255)

                                                                                                                            aaTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                             <  1:1511370‑M1/150‑124 (MQ=255)

                                                                                                                            aaTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                             <  8:776211‑M1/150‑124 (MQ=255)

                                                                                                                             aTTTTCGCTTAATTCAGCGAAAACAAtgtagaaaataacgtcatgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgccttatttgtatcatagcttaa                           <  2:1394946‑M1/151‑126 (MQ=255)

                                                                                                                                ttCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                         >  8:1637537‑M1/1‑23 (MQ=255)

                                                                                                                                  cGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaat                       <  5:1535924‑M1/150‑130 (MQ=255)

                                                                                                                                    cTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatta                     >  8:892339‑M1/1‑19 (MQ=255)

                                                                                                                                     ttAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaa                    >  4:1476884‑M1/1‑18 (MQ=255)

                                                                                                                                      tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaac                   <  7:722306‑M1/150‑134 (MQ=255)

                                                                                                                                      tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaa                    <  7:1209171‑M1/149‑133 (MQ=255)

                                                                                                                                       aaTTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaact                  <  5:190742‑M1/150‑135 (MQ=255)

                                                                                                                                       aaTTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaact                  <  3:666168‑M1/150‑135 (MQ=255)

                                                                                                                                         ttaattgaaagctAtgtattaaataacgtgctgaactaattgtccataatatttcaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactca                <  4:1098292‑M1/144‑137 (MQ=255)

                                                                                                                                         ttCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactca                >  3:169857‑M1/1‑14 (MQ=255)

                                                                                                                                           cAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagatgaacacgcctgatttgtatcatagcttaagaattaactcaaaa             <  1:1351423‑M1/151‑140 (MQ=255)

                                                                                                                                                 aaCCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatatttt       >  6:1644120‑M1/1‑6 (MQ=255)

                                                                                                                                                  aCCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttc      <  6:1516568‑M1/151‑147 (MQ=255)

                                                                                                                                                   ccAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtggtgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttca     <  2:554823‑M1/151‑148 (MQ=255)

                                                                                                                                                    cAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcac    <  1:770155‑M1/151‑149 (MQ=255)

                                                                                                                                                     aatgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcact   >  7:163114‑M1/1‑2 (MQ=255)

                                                                                                                                                     aatgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcact   <  5:1618803‑M1/151‑150 (MQ=255)

                                                                                                                                                      atgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcactt  >  3:1253658‑M1/1‑1 (MQ=255)

GCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTC  >  NC_000913/1673406‑1673706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`