Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913696,8010AT29.3% 249.4 / 68.9 137noncoding (30/75 nt)glnWtRNA‑Gln
Reads supporting (aligned to +/- strand):  ref base A (70/24);  new base T (18/21);  total (88/49)
Fisher's exact test for biased strand distribution p-value = 2.45e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 139 total aligned reads displayed.

ACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGC  >  NC_000913/696652‑696951
                                                                                                                                                     |                                                                                                                                                       
aCATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAc                                                                                                                                                        >  2:1045866/1‑151 (MQ=255)
aCATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAc                                                                                                                                                        >  4:771504/1‑151 (MQ=255)
 cATTCGGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAcc                                                                                                                                                       >  6:647730/1‑151 (MQ=255)
 cATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAcc                                                                                                                                                       >  3:1561886/1‑151 (MQ=255)
 cATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAcc                                                                                                                                                       <  5:1206826/151‑1 (MQ=255)
 cATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAcc                                                                                                                                                       >  1:1414838/1‑151 (MQ=255)
 cATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAcc                                                                                                                                                       >  5:255697/1‑151 (MQ=255)
     cAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGATGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTg                                                                                                                                                   >  4:368680/1‑151 (MQ=255)
     cAGAATTTGGGGGCTACGAGGTGCATCCAGCATGGGACCCCATCATTCTGAGTGATGTGCTCTAACGATCTGAGCTACGTAGCCTGATTGTTTCTTCCATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTg                                                                                                                                                   <  3:713769/151‑1 (MQ=21)
     cAGAAGTTGGTGGCTAGGACGGGATGCCACCCTGTGCCCCCATCATTATGAGTGATGCGCGATAACGTAGTGAGATACGGAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGt                                                                                                                                                    <  7:1366040/150‑1 (MQ=21)
       gAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGcc                                                                                                                                                 >  2:1538623/1‑151 (MQ=255)
       gAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGcc                                                                                                                                                 >  7:683370/1‑151 (MQ=255)
        aaTTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCt                                                                                                                                                >  4:92442/1‑151 (MQ=255)
        aaTTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCCGTCCCt                                                                                                                                                >  3:917840/1‑151 (MQ=255)
             ggtggCTACGACGTGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCg                                                                                                                                           <  6:1596827/151‑1 (MQ=255)
               tggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCt                                                                                                                                         >  4:1023179/1‑151 (MQ=255)
                 gCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAGCTGAGCTCCGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTg                                                                                                                                       >  4:360680/1‑151 (MQ=255)
                 gCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTg                                                                                                                                       >  4:1007155/1‑151 (MQ=255)
                  cTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTgg                                                                                                                                      >  2:1084648/1‑151 (MQ=255)
                   tACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGc                                                                                                                                     >  5:279353/1‑151 (MQ=255)
                    acgacgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCg                                                                                                                                    >  7:1401243/1‑151 (MQ=255)
                     cgacgGGATTCGAACCTGTGACCCCATCATTAAGAGTGATGTTCTCTAACCAACTGAGCTACGTAGAGAGATTGTTTCTTCGATGGATGGGGTACCTGGATTCGAACCAGGGAATGCCGGTCTCAAAAACCGGTGCCTTCCCGCTTGGCgt                                                                                                                                   >  3:88631/1‑150 (MQ=25)
                      gacgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGAt                                                                                                                                  >  8:186432/1‑151 (MQ=255)
                      gacgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGAt                                                                                                                                  >  2:766864/1‑151 (MQ=255)
                       acgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGAt                                                                                                                                  >  6:1146654/1‑150 (MQ=255)
                       acgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGAt                                                                                                                                  >  7:1610154/1‑150 (MQ=255)
                          ggATTCGATCCTGTGACGGCTTCATTATGAGTGATGATCTCTAACAAACTGAGCTACGTAGCGAGATTGTTTCTTAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATAccc                                                                                                                              <  4:1007123/151‑1 (MQ=21)
                           gATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATAcccc                                                                                                                             >  5:735867/1‑151 (MQ=255)
                            aTTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATAcccc                                                                                                                             >  2:96508/1‑150 (MQ=255)
                            aTTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCa                                                                                                                            <  3:1378438/151‑1 (MQ=255)
                             ttCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCa                                                                                                                            >  3:757511/1‑150 (MQ=255)
                             ttCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCa                                                                                                                            >  4:1485238/1‑150 (MQ=255)
                             ttCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCa                                                                                                                            >  5:169045/1‑150 (MQ=255)
                             ttCGAACCTGTCACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCa                                                                                                                            >  4:1360046/1‑150 (MQ=255)
                              tCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCaa                                                                                                                           >  5:978247/1‑150 (MQ=255)
                               cGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCatcc                                                                                                                         >  4:1445513/1‑148 (MQ=255)
                                gAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCaagcc                                                                                                                        >  5:1104808/1‑148 (MQ=255)
                                gAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCaaaa                                                                                                                         >  6:33813/1‑148 (MQ=255)
                                gAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATaa                                                                                                                        <  4:1629917/151‑1 (MQ=255)
                                 atcatgtgACCCCATCATTATGAGTGCTGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCatcc                                                                                                                         <  6:946603/145‑4 (MQ=255)
                                 aaCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGcacatcgcaacaga                                                                                                                        >  3:1379732/1‑137 (MQ=255)
                                  aCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCataacac                                                                                                                      >  6:1223031/1‑145 (MQ=255)
                                  aCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCaaacga                                                                                                                       >  6:980638/1‑146 (MQ=255)
                                     tgtgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGCTGCCTTACCGCTTGGCGATACACCaaacctaca                                                                                                                    >  6:1638401/1‑143 (MQ=255)
                                        gACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCataagaacaacgc                                                                                                                >  1:1143953/1‑139 (MQ=255)
                                        gACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCaaccgtccaacgg                                                                                                                >  1:1214111/1‑140 (MQ=255)
                                         aCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCatacgtacaacgct                                                                                                               >  5:539449/1‑138 (MQ=255)
                                         aCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCataagtacagcgct                                                                                                               >  3:586671/1‑138 (MQ=255)
                                         aCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATacaaccccgcg                                                                                                               >  7:229563/1‑141 (MQ=255)
                                         aCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTCGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCatccgaacaccgct                                                                                                               >  7:111697/1‑138 (MQ=255)
                                         aCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATGGTTTCTTCGATGGGTGGGGTACCGGGATTCGAACCCGGGATTGCCGGTTGCAAAAACCGGTGCGTTACCGCTTGGCGATCCCCCatccgacccccggt                                                                                                               >  3:969993/1‑138 (MQ=25)
                                           cccATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACAGCTTGGCGATACCCCaaaacaacaccggtgt                                                                                                             >  6:295970/1‑137 (MQ=25)
                                                   tATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCtt                                                                                                     <  8:1536599/150‑1 (MQ=255)
                                                       attGAGGTGCGCTAACCAACTGCGCTACGTAGCGAGTTTTTGTATTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGc                                                                                                                                          <  3:139855/108‑1 (MQ=17)
                                                        gTGAGGTGCTCTAACCAAGTGAGCTACGTAGACCGAGTGATTCTTCGTTGGCTGTGGTGACTGGAGTCGATCCAGGGACTGCCGGTATCTCAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCga                                                                                               <  8:745048/151‑1 (MQ=21)
                                                               gCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGAt                                                                                        <  3:768689/151‑1 (MQ=255)
                                                                        aaCTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGt                                                                               <  1:280901/151‑1 (MQ=255)
                                                                          cTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAAGAACACCGCGGTG‑ACGCGGGTAATGGAAGCAGATCGCTCCGGTAc                                                                             >  7:377562/1‑151 (MQ=17)
                                                                            caGCTACGTAGCCATATTGTGTCTTCGATGGCTGGTTACCCTCTATTCTAACGAGTGACTCCCTGTATCTAAACCCGTTGCCATACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCt                                                                           <  3:1533879/150‑1 (MQ=255)
                                                                                 cagttttatttttGTTTATTCATTGGCTGGCGTACGAGGATTCTAACCTGGGATTGACGGCATCATTTTCCTGTTCCTTACTGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGAtt                                                                      <  7:1049740/140‑1 (MQ=255)
                                                                                            tatttaattaaaTGGCTGGGGTACCTGGATTCGAACCTCGGAATGCCGGTATCAAAACCCGGGGCCTTACCGCTTGTCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAggg                                                            <  5:1610246/139‑1 (MQ=25)
                                                                                             tttttataaattGGCTGGGGTACGAGGATTCGAACCAGGGATTGCCGGTATCATAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCTGTG‑AACCGCTTACTCGAATAAGATGGCTGGGGTACCTGGATTCGAACCAGGGa                                                           <  8:406847/139‑1 (MQ=21)
                                                                                             cttgaataaattGGCTGGGGTACGAGGATTCGAACCACGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGaagaag                                                                                          <  3:1551748/108‑1 (MQ=17)
                                                                                             cttgaataaattGGCTGGGGTACATGGATTCGAACCTCGGAATGCCGGTATCATAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCgaaga                                                                                            <  2:1412191/106‑1 (MQ=14)
                                                                                             cttgaataaattGGCTGGGGTACAAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACAGGGCGGTG‑AACCGCTAACTCgaaga                                                                                            >  8:1410655/12‑117 (MQ=11)
                                                                                               gtccgaccaTGGCTGGGGTACCCGGATTCGAACCACGGAATGCCGGTATCATCAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGG‑GTTGTAACGGCTTAGTGTAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATg                                                        <  8:215307/143‑1 (MQ=18)
                                                                                                   taaattGGCTGGGGTACGAGGATTCGAACCTGGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTAcc                                                                            <  6:1608846/122‑1 (MQ=17)
                                                                                                    aaattGGCTGGGGTACGAGGATTCGAACCTGGGAATGCCGGTATCATAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCgaaga                                                                                            <  1:1046587/106‑1 (MQ=17)
                                                                                                    aaattGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCgaaga                                                                                            >  5:1041070/5‑110 (MQ=11)
                                                                                                      gATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAAACCCGCGCTG‑AACCGATAACTCGAAGAAGATCGATGCGGTAACTCGATACCAAACAGGGAATACCgcaa                                                  >  1:516/1‑147 (MQ=17)
                                                                                                         ggCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCg                                                                                                <  7:1366330/101‑1 (MQ=18)
                                                                                                         ggCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCg                                                                                                >  6:1367946/1‑101 (MQ=11)
                                                                                                               ggTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑aa                                                                                                           <  4:937931/84‑1 (MQ=1)
                                                                                                                  acgaggATTCGAACCTCGGAATGCCGGAATCATAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTc                                                                     <  7:1355378/115‑1 (MQ=21)
                                                                                                                  acgaggATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCTGGCGGTG‑AACATCTTACTCGAAGAAGATGGCTGGGGTAGATGGATTCg                                                                    >  4:598017/5‑120 (MQ=17)
                                                                                                                  acgaggATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCTGGAGGTG‑AACAGCTTACTCGAAGAAGATGGCTGGGGAACATGGATTc                                                                     >  6:1356999/5‑119 (MQ=17)
                                                                                                                  acgaggATTCGAACCTCGGAATGCCGGAATCACAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCg                                                                    <  3:595153/116‑1 (MQ=21)
                                                                                                                  aCCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAAAACGGCGGTG‑ACACGGTTAATCTAAGAAGGTCGCTCGTTTACCTGGAATCGAAACAGGCAACGCCGGTAtaatatcccgctt                                     >  5:775388/1‑139 (MQ=9)
                                                                                                                   cgaggATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACt                                                                                                  >  6:1113378/4‑89 (MQ=11)
                                                                                                                   cgaggATTCGAACCTCGGAATGCCGGAATCACAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACt                                                                                                  <  7:1111750/86‑1 (MQ=14)
                                                                                                                   ccTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTAGTCGAAGAGGCTGGCTGGGGTACCTGGATTCGAAGCAGGGAATGCCGGTATCAAATCCCGGTGc                                    >  8:1311069/1‑151 (MQ=25)
                                                                                                                    gaggATTCGAACCTCGGAATGCCGGAATCACAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTa                                                                              <  2:1013639/106‑1 (MQ=18)
                                                                                                                         ttCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACTAGGGAATGCCGGTATCAAAAACCGGTGCCTTAcc                              >  7:928162/1‑151 (MQ=255)
                                                                                                                         ttCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATAAACAACCGGTGCCTTAcc                              >  7:631320/1‑151 (MQ=255)
                                                                                                                          tCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAAAAGGGCGGTG‑AAACGGTTAATCTAAGAAGATGGCTGGGGTACCTGGATTCGAAACAGGGAAGGCCGGAATCAAAAGCAGGTgaggtaa                               >  4:543932/1‑143 (MQ=21)
                                                                                                                                 tcggAATGCTGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCTGGCGGTG‑a                                                                                                            >  6:743235/3‑65 (MQ=1)
                                                                                                                                   ggAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGTTACCCCAATAACCGGGCGGTG‑AACCGCTTACt                                                                                                  <  1:1546072/73‑1 (MQ=17)
                                                                                                                                   ggAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGGTACCCCAATAACCGGGCGGTG‑AACCGCTTACt                                                                                                  >  5:1537930/1‑73 (MQ=17)
                                                                                                                                    gAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTGAc                                                                                                   >  2:653608/1‑71 (MQ=17)
                                                                                                                                    gAATGCCGGAATCACAATCCGGTGCCTTACCGCTTGGCGATACCCCAATACCCGGGCGGTG‑AACCGCTTAc                                                                                                   <  8:653610/71‑1 (MQ=17)
                                                                                                                                     aaTGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AAc                                                                                                          <  5:1340241/63‑1 (MQ=255)
                                                                                                                                      aTGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAACATCGATGGGGTACCTGGATTCGAAACAGGCAATGCAGGTATAAAAAACCGGTGCCTTACCGCTTGCCGATAcc                 >  7:775527/1‑151 (MQ=37)
                                                                                                                                        gCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCGTACTCGAATAAGAt                                                                                        >  5:981825/1‑78 (MQ=18)
                                                                                                                                         ccGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGc                                                                                                                  >  4:1159888/1‑52 (MQ=1)
                                                                                                                                         ccGGAATCACAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGc                                                                                                                  <  3:1155230/52‑1 (MQ=11)
                                                                                                                                         ccGGAATCACAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGc                                                                                                                  <  3:1181838/52‑1 (MQ=11)
                                                                                                                                              aTCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTc                                                                                                 <  7:972892/63‑1 (MQ=255)
                                                                                                                                              aTCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AAGCGGTTAGTCGAAGAAGATGGCTGGGGGACCTCGAATCGCTGCAGGGGCGGGCGGGATCAAAAGCAGCTTCGTTACCGATAGGCGCTCCCCCATCCg          >  1:603329/1‑150 (MQ=16)
                                                                                                                                              aTCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGt         >  7:95134/1‑151 (MQ=255)
                                                                                                                                                     aCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTCGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACgg  >  5:968081/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
ACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTG‑AACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGC  >  NC_000913/696652‑696951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑