Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,552,1910CA26.3% 720.1 / 103.9 392intergenic (+200/+207)fdnI/yddMformate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (79/199);  new base A (75/24);  total (164/228)
Fisher's exact test for biased strand distribution p-value = 3.22e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 399 total aligned reads displayed.

CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATC  >  NC_000913/1552041‑1552341
                                                                                                                                                      |                                                                                                                                                      
cATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc                                                                                                                                                        <  6:1195904/151‑1 (MQ=31)
cATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc                                                                                                                                                        <  1:598627/151‑1 (MQ=31)
     tGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCATTTTAAAATg                                                                                                                                                   >  6:298950/1‑151 (MQ=14)
        aGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcg                                                                                                                                                <  7:322432/151‑1 (MQ=33)
        aGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTAAACGCATTATACTGCATAAAAACAATTCAAATCAAATAGATTCAATTGAACCAGTAAGAATAATAAAAGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcc                                                                                                                                                >  4:97702/1‑150 (MQ=2)
          aCAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCt                                                                                                                                              <  8:402368/151‑1 (MQ=33)
            aaCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAATATCaaaagaccctct                                                                                                                                            >  4:838770/1‑142 (MQ=255)
               gTAGGCTTTGTTCATGGCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa                                                                                                                                         <  6:454452/151‑1 (MQ=37)
                  ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCCAATGGCGCTGTaatcgg                                                                                                                                      >  3:1539517/1‑147 (MQ=255)
                     tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGGCGCTGTATAAggggg                                                                                                                                   >  5:1100624/1‑148 (MQ=16)
                       tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCTCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc                                                                                                                                  <  1:20907/150‑1 (MQ=255)
                          tcatttcGGATGCTGCGTGAACGCCTTATACTTCATGAAAACCCTTCAAATCCAATAGATTGCATTGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtt                                                                                                                               <  1:336917/144‑1 (MQ=14)
                          tCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATACAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGACAttt                                                                                                                              >  6:1524978/1‑151 (MQ=255)
                           cATTCCGGATGCGGAGTGAACGCCTTATCCTGCATGAAAACGCTTCATATCCATTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATGAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAttt                                                                                                                              <  6:1451725/150‑1 (MQ=14)
                           cATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCTCTGTAAAAGGAGTCAtttt                                                                                                                             >  6:1263602/1‑151 (MQ=255)
                           cATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTATAAGGCGGCAtttt                                                                                                                             >  7:1279936/1‑151 (MQ=255)
                            aTGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTc                                                                                                                            >  7:139729/1‑151 (MQ=255)
                               ccGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACATATAGGAATAATAAGCTTAACGCATAAAGAAATGTAGATTTTGTAATAATATTAAAATGGCGGTTTAAAAAAATTCATTTTCat                                                                                                                          >  4:1022061/1‑150 (MQ=2)
                                      cggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGa                                                                                                                  <  5:844014/151‑1 (MQ=255)
                                        gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACa                                                                                                                <  7:811233/151‑1 (MQ=255)
                                            gAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGt                                                                                                            <  5:367874/151‑1 (MQ=255)
                                            gAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGt                                                                                                            <  5:434997/151‑1 (MQ=255)
                                             aaCGCCTTATCCGTCATGAAAACCCTTCAAATCCATTAGATTGCAGTGAACGTGTAGGACTGATACGCTTATCGCATCAGGCAATTTTTCGTTTGTAATGAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTa                                                                                                           <  5:1377958/151‑1 (MQ=18)
                                             aaCGCCTTATCCGTCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCATGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGt                                                                                                            <  2:1210683/150‑1 (MQ=255)
                                              aCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTAATATTGTATACAACga                                                                                                            >  4:319301/1‑148 (MQ=255)
                                               cGCCTTATCCTGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAgg                                                                                                         <  2:1467592/151‑1 (MQ=255)
                                                gCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGGCGCTGTATAAGGCGTCATTTTAATATTGTATACAACGTAGGc                                                                                                        >  3:827465/1‑151 (MQ=255)
                                                 ccTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTTTAAAAAGAGACATTTTAATATTGAATAAAACGAAGGCt                                                                                                       >  2:337643/1‑151 (MQ=11)
                                                 ccTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTACATATGACCAGAGTATGAAATGGCACTCTATTAGGCGTCATTTTAATATTGGATACAACCTAgagt                                                                                                       >  6:352707/1‑148 (MQ=14)
                                                  cTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGTAGTCAACGTAGGCtt                                                                                                      >  3:1338178/1‑151 (MQ=255)
                                                    tATCCTTCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCtt                                                                                                      <  1:1056090/149‑1 (MQ=255)
                                                    tATCCGGCATGAAAACCCTTCAAATCCAATAGATTGAATTGAACGTGTAGGCCTGATAAGCGTAGCGCATCATTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCttt                                                                                                     <  5:660419/150‑1 (MQ=255)
                                                     aTCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTATAAATGGCGCTTTAAGATCCGTAAATATTATATTATAGAAAAAGTatactattt                                                                                                   >  1:1146058/1‑143 (MQ=11)
                                                     aTCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAACGGGCCATTTTGTTATTTTAGAGCAAGTAGGCATTGt                                                                                                   >  8:1019319/1‑151 (MQ=11)
                                                       acGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCATGATAAGCGTATCGCATCATTTAATGTTGCGTTTGTTATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTc                                                                                                 <  1:1604575/150‑1 (MQ=21)
                                                         ggCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt                                                                                               <  7:160584/151‑1 (MQ=255)
                                                         ggCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTCTTCAt                                                                                               >  7:736444/1‑151 (MQ=255)
                                                         ggCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTATAAAGGAAGAGATTATTATATTGTAAAAAACTAAGCATTTGTTAAt                                                                                               >  6:20734/1‑151 (MQ=11)
                                                            aTGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGcc                                                                                            <  5:1615768/151‑1 (MQ=255)
                                                                aaaCCCTTCTAATCCCATAGATTGCAGTGACCGTGTAGGCCTGATACGCGTAGCGCATCATGCAATGTTGCGTTTGGCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAt                                                                                        <  8:1458532/151‑1 (MQ=37)
                                                                    ccTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGACATTTTAATATTGAATACAAAGAAGGCTTTCTTCATGCAGGaaac                                                                                      >  1:517349/1‑146 (MQ=17)
                                                                       tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggc                                                                                   <  8:620150/149‑1 (MQ=255)
                                                                         aaaTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAAGGCGTCATTTTAATATTGTAGACAAAGTAGGCTTTGTTCATGCCCGAAGAGGCGtt                                                                                >  6:1594015/1‑149 (MQ=18)
                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAc                                                                             <  5:535735/151‑1 (MQ=255)
                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAc                                                                             <  5:1532325/151‑1 (MQ=255)
                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTAGAAAACGTAGGCTTTGTTCATGCCGGATGAGGCGTGaa                                                                              >  3:17553/1‑150 (MQ=255)
                                                                            tCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGGGTCATTTTCATATTGTAGACAAAGTAGGCTTTGTTCATGCAGCATGCGGCGTTAAcc                                                                            >  7:393279/1‑150 (MQ=21)
                                                                                aTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGAGTCATTTTAATATTGAATACAAAGTAGGCTTTATTCATGCAGGAAGAGGCGTGaaacaca                                                                         >  2:1306829/1‑145 (MQ=17)
                                                                                 tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGAAATGTTGCGTTTGTCATAAGTTTCAAATGTCGCTGTAAAAGGCGTCATTTTCATATTGTATACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCtt                                                                        >  6:7645/1‑150 (MQ=255)
                                                                                  aGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTa                                                                       <  7:580387/150‑1 (MQ=255)
                                                                                    aTTGCAGTGAACGTGTAGGCCTGATAAGCTTAGCGCATGAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATcc                                                                    <  6:1366548/151‑1 (MQ=255)
                                                                                    aTTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGACTTATcc                                                                    >  6:798457/1‑151 (MQ=255)
                                                                                      tGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCg                                                                   <  5:228357/150‑1 (MQ=255)
                                                                                      tGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCg                                                                   <  8:1087121/150‑1 (MQ=255)
                                                                                       gCAGTGAACGTGTAGGACTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                 <  4:1204180/151‑1 (MQ=255)
                                                                                        cAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCa                                                                <  8:1386971/151‑1 (MQ=255)
                                                                                            gtacgcttcggCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa                                                             <  8:940664/141‑1 (MQ=255)
                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa                                                             <  1:1461019/150‑1 (MQ=255)
                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa                                                             >  4:1551049/1‑150 (MQ=255)
                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa                                                             <  3:708087/150‑1 (MQ=255)
                                                                                             aaCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAATGCGACATTTTAATATTGTAGACAAAGTAGGCTTTATTCATGCCCAATTAGGCTAGAACGACTTATAAGGAATGaa                                                            >  4:691476/1‑150 (MQ=18)
                                                                                               cGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCAGGATGCGGCGTGAAAGCCTTATCCGGCATGAAAAc                                                         >  3:1430640/1‑151 (MQ=255)
                                                                                                   tAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAATGCGTCATTTTAATATTGTAGACAACGTAGGCTTTTTTCATGCCGGATGAGGCGTGAACGACTTATACGGCATGAAAACCCtt                                                     >  6:939819/1‑151 (MQ=21)
                                                                                                   tAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAGACGGCATGAAAACCCtt                                                     >  2:74655/1‑151 (MQ=255)
                                                                                                   gaGGCCTGATAAGCGTAGCGCATCAGGCAATGTGGCGTGTGTCATCAGTTTCAAATCGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCtt                                                     <  5:30228/150‑1 (MQ=255)
                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaa                                                  <  7:1463289/151‑1 (MQ=255)
                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGGCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaa                                                  <  2:184614/151‑1 (MQ=255)
                                                                                                        cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGCCGATGTAAAAGGCGTAATTTTAATATTGTAGACAAAGTAGGCTTTGTTCATGCCGGATGCGGAGTGAACTCCTTATCCGGCATGAAAACCCTTCAAAt                                                >  2:44542/1‑151 (MQ=18)
                                                                                                             aaGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAAt                                           <  3:1208344/151‑1 (MQ=255)
                                                                                                                 gTAGGGCTTGAGGCAATGTTTGGTTTGTCTTCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAt                                       <  1:1364886/151‑1 (MQ=14)
                                                                                                                 gTAGCGCATCATGCAATGTTGCGTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAt                                       <  3:960048/151‑1 (MQ=255)
                                                                                                                 gTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGCCGCTGTAAAAGGCGACGATATCAATATCAAGCGTAGGTAGGCATTTTTCATGACGCATGCGCGGTTCACGGCTTATCCGGCATAAAAACCCTTGAAAGCGAATAggg                                       >  3:103747/1‑149 (MQ=12)
                                                                                                                   aggggatgaGGCAATGTTTAGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt                                      <  7:1153107/142‑1 (MQ=14)
                                                                                                                   aGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt                                      <  3:594898/150‑1 (MQ=255)
                                                                                                                     cgcATCTGGCAATTGTGGGTTTGTGATGAGTTTGATATGGAGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCa                                   <  8:1194007/151‑1 (MQ=14)
                                                                                                                      gcATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAAAGAGACATTTTAATATTGAATACAAGATAGGATTAGTTAATTCAAGATAAAGCGTGAACCCATTATACGAAATCAAAAACCTACAAATAAAATAGaaaaaa                                   >  2:97028/1‑145 (MQ=9)
                                                                                                                          cAGGCAATGTTGCGTTTGTCATCAGTTTAAAATTCCGATGAAAAACGAGTAATTTTAATATTTTAGACAAAGTATGCTTTGTTCATGACGGATGAGGAGTGAAAAAATTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGa                               >  6:246455/1‑150 (MQ=17)
                                                                                                                           aGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGATCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTTAAc                             >  1:415942/1‑151 (MQ=255)
                                                                                                                           aGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATACGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTTAAc                             >  1:924071/1‑151 (MQ=255)
                                                                                                                           aGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGTCGTTAAAGACTTATCCGGCATGAAAACACTTCAAATCCAATATATTGCAGTGAAc                             >  4:594220/1‑151 (MQ=17)
                                                                                                                           aGGCAATGTTGAGTTTTTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGaa                              <  4:219087/150‑1 (MQ=255)
                                                                                                                            ggCAATGTTTTTTTTTTAATCAGTTTCAAATGTCTCTTTAAAATTCGTCATTTTTATATTCTACAAATCGTAGGTTCTGTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACg                            <  6:1000077/151‑1 (MQ=14)
                                                                                                                             gCAATGTTTCGTTTCTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                           <  2:599726/151‑1 (MQ=255)
                                                                                                                             gCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                           <  7:665258/151‑1 (MQ=255)
                                                                                                                             gCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                           >  7:285894/1‑151 (MQ=255)
                                                                                                                              taatgtcttttttATCATAAGCTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                           <  2:16052/140‑1 (MQ=11)
                                                                                                                              aaaTGTTGCGTTTCTCATCAGTTTCAAATGGCGGTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtg                          <  4:1390630/150‑1 (MQ=255)
                                                                                                                               aaTGTTTCGTTTGTCATAAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtgt                         <  8:230553/151‑1 (MQ=255)
                                                                                                                               aaTGTTGCGTTTTTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtg                          <  2:269909/150‑1 (MQ=255)
                                                                                                                               aaTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtgt                         >  3:1094960/1‑151 (MQ=255)
                                                                                                                                aagTTGGGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTa                        <  8:280471/149‑1 (MQ=255)
                                                                                                                                  gTTGCGTTTGTCATCAGTTAAAAATGGCGCTTTAAAAGGCGTCATTTTCATATTGAAGACAACGTAGGCTTAGTTCATGCAGGATTCGGACTCAACTCCTTATCCGACATGAAAAACCATAAAATCCAAAACATTGAAGTGAACGTGTAgg                      >  2:684134/1‑151 (MQ=255)
                                                                                                                                       gTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTg                  >  1:1226715/1‑150 (MQ=255)
                                                                                                                                       gTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTCAACGTGTAGGACTg                  >  4:480205/1‑150 (MQ=255)
                                                                                                                                          tttaataaGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa               <  3:763306/143‑1 (MQ=12)
                                                                                                                                           gTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAAACCAATAGATTGCAGTGAACGTGTAGGCCTGATaa              >  6:700410/1‑150 (MQ=255)
                                                                                                                                            tcatcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc            >  3:940117/1‑151 (MQ=39)
                                                                                                                                                 aGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgc       >  8:608500/1‑151 (MQ=35)
                                                                                                                                                  gTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcg      >  3:461016/1‑151 (MQ=35)
                                                                                                                                                      cAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACATCGTAGGGTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAt   <  1:72991/150‑1 (MQ=17)
                                                                                                                                                      |                                                                                                                                                      
CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATC  >  NC_000913/1552041‑1552341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑