Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9100GC25.3% 331.4 / 29.7 193A664A (GCG→GCC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base G (110/29);  new base C (43/4);  total (156/37)
Fisher's exact test for biased strand distribution p-value = 7.57e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 197 total aligned reads displayed.

ATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCG  >  NC_000913/1708768‑1709060
                                                                                                                                               |                                                                                                                                                      
aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCAGTGGCCGCGGCTAGTGCGGGAGCGCA‑cgcgcgggaccg                                                                                                                                                >  8:413731/1‑145 (MQ=11)
  ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGCGCCAGAACAACAGGTCGATCAGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGAGCGCAACCggg                                                                                                                                              >  3:1355943/1‑151 (MQ=255)
        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACCCAAGCTGGAACAGCAAAAGCCTAATGCCGACACAGAAGAACACGAAGATCCGCGCAAAGCGGCCGTCGACGCGCCTATTGCCCGCGCCAA‑AGCCAGCAACCGCGCACAGc                                                                                                                                        >  2:48625/1‑151 (MQ=11)
          aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGAA‑AGCCCGCAAACCGGCACAGCa                                                                                                                                       >  4:589423/1‑150 (MQ=14)
            ccgcccgcGACGCCCCTACAGCCCGGGCCACAGCCCCGCAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGCTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAAcc                                                                                                                                    <  7:730284/151‑1 (MQ=11)
              gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCCAGCCCA‑CGCGAGCCAACTCGAACAGCAACAgg                                                                                                                                  >  7:260075/1‑151 (MQ=14)
                   cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCGAA‑CGCCCGCAACGGGGACCAGCGACCGGCtc                                                                                                                               >  5:722410/1‑148 (MQ=14)
                    gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGCGCACA‑AGCCCGAAAACGCGAACAGCAAAAGGCTAAt                                                                                                                             >  3:110587/1‑150 (MQ=14)
                    gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGCAGCCGCTATTGCCCGCGCGCA‑CGCCCGCAAACCCGACCAGCACCCGGCTACTg                                                                                                                            >  5:1632592/1‑151 (MQ=14)
                      aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGACGCCGCTATTGCCCGCGCGCA‑CGCGAGCAAACCCGCCCAGCACCCGGCTCTTGCg                                                                                                                          >  5:1434545/1‑151 (MQ=14)
                         cGCTATTGCCCGTGCCAAAGCTCGCAATCTTGAACAGGAACAGGCTAATTCCGACCCAGAACAACAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg                                                                                                                       <  6:1191960/151‑1 (MQ=14)
                           cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCTAA‑AGCCAGCAAACGGGCCCAGCACCAGGCGAATGCgcgggc                                                                                                                     >  5:854464/1‑146 (MQ=14)
                             aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAA‑AGCTCGCAAACGGGAACAGCAACCGGCTAATGAGGAGCCa                                                                                                                    >  2:191045/1‑150 (MQ=255)
                                    gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGAGCGAA‑CGCGCGCAAACGGGCACAGCACCAGGCTCATCCGGAGCCcgaagacct                                                                                                            >  7:403791/1‑148 (MQ=14)
                                       ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCGCGAGCCAA‑AGCGCGCAAGAGGCCACAGCAACCGGCTAATGCGGTGCCAGAAGAACAGGt                                                                                                         >  8:476345/1‑151 (MQ=14)
                                       ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCCGCCGCTATTGCCCGCGCAAA‑AGCCCAAAAACCCGACCAGCAACAGGCTAAAGACGAGCAAGAACAACAAGt                                                                                                         >  1:226515/1‑151 (MQ=2)
                                             cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCCA‑AGCGCGCAAACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAgcgtcaccc                                                                                                   >  7:1024317/1‑143 (MQ=14)
                                             cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCGAA‑AGCCCGCAAACGGGACCAGCACACGGATAATGCCGAGCACGAAGAGCTGGTAGAta                                                                                                    >  1:867716/1‑149 (MQ=14)
                                                gCAAGCTGGAACAGCAACATTATAATTACGAGCCTGAACAACAGGTCTATTCGAGTAAAGCCTCCTTTGATGCCGCTATTGACGGTGTTAA‑TCTGTGCAATCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcg                                                                                                  <  1:369889/149‑1 (MQ=12)
                                                     cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGAAGCGGCTATTGCCCGCGCCAA‑TGAGCCCAACCGGGAACAGCAACAGTCTAAAGATGCGCCAGAAGATGAGGTGGATCGGCGCaaac                                                                                           >  8:511398/1‑150 (MQ=11)
                                                      tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCACA‑AGCCAGCAAACGGGCCCAGCAACCGGCTAATGCGGAGCCAGAAGAGCAGGTTGATCCGCGCAGAGc                                                                                          >  6:1028390/1‑151 (MQ=14)
                                                       ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTAGCAGCCGCTATTGCACGACCCAA‑CGCCCTCAAGCGGGGAAAGCCACAGGCGAATGCGGTACCAGAAGAACAGGGGGCTCCGAGCAAAga                                                                                          >  6:250540/1‑149 (MQ=2)
                                                           catcttcAGGCTAATTACGACGCAGAAAAACTTGCTGATCCTCGTAAAGCTGCCGTTGAAGCAGCTATTGCCCGCGCCAA‑AGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGcag                                                                                     <  6:1606580/145‑3 (MQ=11)
                                                             cccccccgcaccccccGACCCAGAACAACAGGTCTATCAGCTCCAAGCCGCCGGCCAACCCGCTA‑TACCCGCGGCAATCGAGCTCACACGTGACCACCACCGCTCTAATGCGGACCCAGAACAACAGGTGGATCCGCGCAAAGCTGCCGTc                                                                                   <  3:251170/137‑1 (MQ=255)
                                                              cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGATAATGCGGAGCCAGAAGTACAGGTTGATCAGCGCAAAGCTGCAGtgc                                                                                  >  6:771316/1‑149 (MQ=17)
                                                              ataaaGGCTACTGCGTAGACAGATCAACAGGTTGTTGCGCTCAATCTTTCCGTCGACGACGCTATTCCGAGCTCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc                                                                                   <  4:530041/146‑1 (MQ=9)
                                                               aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCCCGCAACCGCGACCAGCACCAGGCTAAAGAGGAGCCAGAAGAACATGTAGATCAGCGCAAAGCTGCAGTCgc                                                                                 >  5:602157/1‑150 (MQ=14)
                                                               aaCAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGAGCAAA‑AGCGCGAAAACGCGACCAGCACCAGGATAAAGCGGAGCCAGAAGAACAGGTTGATCCGCGAAAAGCGGcagatgc                                                                                 >  4:875071/1‑145 (MQ=14)
                                                                 cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAA‑CGCCCCCAAACGCGACCAGCACCAGGGTAATGCGGAGCCAGAAGACCAGGTGGCTCAGCGCACAGCGGCTGttgcac                                                                               >  8:885014/1‑146 (MQ=14)
                                                                  aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCCCGCAAACGGGCACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCAGTCgccgc                                                                              >  3:630807/1‑147 (MQ=14)
                                                                  aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc                                                                              >  6:925147/1‑151 (MQ=255)
                                                                  aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAA‑AGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGc                                                                              >  6:697731/1‑151 (MQ=255)
                                                                  aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTTGACGc                                                                              >  3:41793/1‑151 (MQ=14)
                                                                   ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCGAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCGGCCGtggccgcg                                                                             >  8:942072/1‑144 (MQ=14)
                                                                   ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑CGCGCGCAAACGGGACCAGCACCCGGCTAATGAGGAGCCAGAAGAACAGGTTGTTCCGCGCAACGCGGCCGTCGCAGCg                                                                             >  3:879466/1‑151 (MQ=14)
                                                                   ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCgccgcg                                                                             >  5:1336410/1‑146 (MQ=255)
                                                                    gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGCGCCCA‑AGCGCGAAAAGCCGCACAGCACCAGGCTAATGCCGAGCCAGAAGATGAGGTACCTCAGCGCAAcgccgcaggagaaccgg                                                                            >  3:1005932/1‑140 (MQ=2)
                                                                     cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGc                                                                           >  6:838395/1‑151 (MQ=255)
                                                                       aatgtcgacgaaGATCATCAGCTCTATCCGCGCAAAGCTGCCGTCGAAGCTGCTATTGCACGTGCCAA‑AGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCt                                                                          <  2:413461/139‑1 (MQ=17)
                                                                           cggaaccAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAA‑AGCCAAAAACCGCGAACAGCACCAGACAAATGAAGAGCCAGAAGAACAGGAAGATACGAGCAAATAGGCAGTATAAGCGGCTAATGc                                                                     >  1:136925/6‑151 (MQ=0)
                                                                           ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑CGCCCGCAAACGGGAACAGCACCAGGCTAAAGCGGAGCCAGAAGAACAGGTTGATCCGCGAAAAGCGGCAGTGGCCGCGGCGATTGc                                                                     >  2:854412/1‑151 (MQ=11)
                                                                           ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGc                                                                     >  2:281246/1‑151 (MQ=255)
                                                                              aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCCCGCAAACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTTGCCGCGGCTATTGCCcg                                                                  >  1:179056/1‑151 (MQ=14)
                                                                               gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCGAGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCcgc                                                                 >  1:1164649/1‑151 (MQ=14)
                                                                                 cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAA‑AGCCCGCAAACGGGAACAGCAACAGGGTAATGCCGAGCCAGAACACCAGGTTGATCAGCGCAAATCTGCAGTCGAAGCGGCTAATGCCCccgc                                                               >  8:739235/1‑151 (MQ=11)
                                                                                  aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGATGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGcc                                                              >  2:454788/1‑151 (MQ=17)
                                                                                     acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGtt                                                                                                        <  5:1370038/106‑1 (MQ=255)
                                                                                     acaacaGGTCGATCCGCGCAAAGCCGCAGTGGAAGCCGCTATTGCCCGGGCGAA‑GGCCAGCAAGCGGGAACAGCAAAAGGCAAATGCGGTGCAATAAGCACAGGTGGATCCGCGCAAAGAGGCCGTTGCAGCGGCTATTGAACgcgcgc                                                             >  8:1401301/1‑147 (MQ=2)
                                                                                      caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAA‑AGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCACAGCGGCCGTAGCAGCGGCTATTGCCCgcgcgcatg                                                          >  8:842174/1‑146 (MQ=14)
                                                                                       aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTTGAAGCGGCTATTGCCCgcgcgcacgc                                                         >  8:48409/1‑145 (MQ=14)
                                                                                         caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTTGACGCGGCTATTGCACGCGCGAACGccc                                                       >  4:1388709/1‑149 (MQ=17)
                                                                                           ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGAGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCCAAGCCCGc                                                     >  8:1600471/1‑151 (MQ=255)
                                                                                              cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGGAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCGCAAGccaccaac                                                  >  8:1211823/1‑144 (MQ=14)
                                                                                               gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCA‑CGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCAAGAAGAACAGGTTGATCCGCGCAAAGCTCCCGTCGAAGCGGCTATTGCACCCGCCAAAGCCCGCAAGc                                                 >  8:1318891/1‑151 (MQ=17)
                                                                                               gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAACGCaagcaagc                                                 >  5:356732/1‑151 (MQ=255)
                                                                                               gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTTGCAGCGGCTATTGCACGCGCGCAGGCCCGCAAgg                                                 >  8:549689/1‑150 (MQ=17)
                                                                                               gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCCCGCGCCAACGCACGCaacc                                                 >  1:695552/1‑149 (MQ=17)
                                                                                                aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGcg                                                >  7:895231/1‑150 (MQ=255)
                                                                                                  ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCCCGCGCGAACGCACGCAAGCAgg                                              >  5:759847/1‑151 (MQ=255)
                                                                                                  ccGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAA‑AGCGCGCAAACGCGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGAAAGCGCAAAAGCaaaaaaacagg                                              >  1:778199/1‑141 (MQ=17)
                                                                                                   cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCGCAGGCCCGCAAGCgggc                                             >  3:1418157/1‑150 (MQ=17)
                                                                                                    ccgtaaaccggccgTGGAAGCAGCTATCGCCCGCGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc                                                                                   <  3:153482/102‑1 (MQ=14)
                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCACACGGGAACAGCAACCGGCTAATGCGGAACCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCAAGCGCCAATGCACGCAAGCGGGAACAGc                                        >  4:1533607/1‑151 (MQ=17)
                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGACCGGCACCCGGGTAATGCGGAGCAAGAAGACCAGGTTGATCCGCGCAAAGCGCCCGTGGACGCGGCTATTGCCCGCGCCAAGGCCCCCACGCGGGACCAGc                                        >  8:1115896/1‑151 (MQ=14)
                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                                        >  4:1622241/1‑151 (MQ=255)
                                                                                                         aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCAGGAACAGc                                        >  2:1339821/1‑150 (MQ=255)
                                                                                                          aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCa                                       >  5:1121310/1‑150 (MQ=255)
                                                                                                             cgccgTCGAAGCCGCTATTGCAGGAGCCAA‑AGCGCGCAAACTTGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAg                                   <  8:776157/151‑1 (MQ=255)
                                                                                                              gccgTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAGCTAGAACAGAAACCGGGAAATGAGGAAAAAGAAGAACAGGATGATCAGCGAAAAGCTGCAGTCGCAGACGATATAAAAAGAGCCAAAGCCCGGAAGCTCGatcggaagaggg                                  >  6:1495731/1‑140 (MQ=2)
                                                                                                              gccgTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAACGCAAGCACGCATGACCAGCGACa                                    >  4:370940/1‑149 (MQ=17)
                                                                                                               ccgTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGCACAGCAACAGGc                                 >  8:1243609/1‑151 (MQ=255)
                                                                                                                cgTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCATCAGGCt                                >  8:1573983/1‑151 (MQ=255)
                                                                                                                cgTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGCTATTCCACGCGCAAAAGCACACAAGCGGGCACAGCAACAGCCt                                >  2:34160/1‑151 (MQ=17)
                                                                                                                 gTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCAACGCCCGCAAGCGGGAACAGCACCAGGCt                                >  2:1000863/1‑150 (MQ=17)
                                                                                                                 gTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAAAGCCCGCAAGCTCGAACAGCATCAgggt                                >  2:722505/1‑148 (MQ=17)
                                                                                                                 gTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGATGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCt                                >  1:557505/1‑150 (MQ=255)
                                                                                                                   cGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTa                               >  5:1286910/1‑149 (MQ=255)
                                                                                                                   cGAAGCAGCAATTGCCCTAGCCAA‑AGCCATCTAGGGTGAACAGCTAACCGCTAAGCCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAt                             <  7:602649/151‑1 (MQ=14)
                                                                                                                     aaGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAGGCACGCAAGCTGGAACAGCAGCAGGCTAATGc                           >  1:1018949/1‑151 (MQ=255)
                                                                                                                     aaGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGc                           >  3:1335736/1‑151 (MQ=255)
                                                                                                                      aGCCGCTATTGCCCGAGACAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGATGATCCGCGCAACGCTGCAGTCGAAGCGGCTATTGCCCGCGCCAACGCCCGCAAGCTGGAACAGCAACAGGCTAATGCg                          >  2:919307/1‑151 (MQ=17)
                                                                                                                       gCCGCTATTGCCCGTGCCAA‑AGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCg                                                                                  <  1:1428982/94‑1 (MQ=255)
                                                                                                                        ccGCTATTGCCCGAGCCAA‑AGCGCGCAATCGGGAACAGCATCCGGGTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGt                        <  5:275854/151‑1 (MQ=255)
                                                                                                                        cagCTATCGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCt                                                                                                                                <  2:1104200/45‑1 (MQ=255)
                                                                                                                         cGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGt                        >  3:714900/1‑150 (MQ=255)
                                                                                                                          gCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGACGACGAGCCTAGTGCACTCGCCAAAGCTCGCCAGCTGGAAGAGCAACAGGCTAATGCGGTAc                      >  7:1233466/1‑151 (MQ=25)
                                                                                                                           cTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc                     >  7:22428/1‑151 (MQ=255)
                                                                                                                           cTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAACGCCAGCAAGCGGGAACAGCACCAGGGTAATGCGGTagc                     >  6:1347004/1‑149 (MQ=21)
                                                                                                                           cTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCAACCAAGCAGGCACAGCAACAGGCTAATGCGGTAcc                     >  2:1394795/1‑151 (MQ=17)
                                                                                                                             atcgCCCGCGCCAA‑AGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc                                                                              <  2:1640394/89‑1 (MQ=11)
                                                                                                                                gCCCGCGCCAA‑AGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAgg                                                                                                          <  5:434476/61‑1 (MQ=255)
                                                                                                                                gCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATCCGGTACCaga                  >  5:329767/1‑149 (MQ=255)
                                                                                                                                gCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTACCaga                  >  7:1543575/1‑149 (MQ=255)
                                                                                                                                 cccGAGCCAA‑AGCCCCCACACTTGCCAAGCAACCGGCTAATGCGGATCCATAAGAACAGGTTGATCCGCGCAAAGCTTCCTTCGAAGCTGCTATTGCACTTGCCAAAGCACGCAAGCTTGAACAGCAACAGGCTAATGCGGTACCagaaga               <  4:1360961/151‑1 (MQ=14)
                                                                                                                                  ccGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGACCAGCACCAGGCTAATGCGGTCCCagaagac              >  1:1188163/1‑150 (MQ=255)
                                                                                                                                   cGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc             >  3:764379/1‑151 (MQ=255)
                                                                                                                                   cGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGATAATGAGGTACCAgaagaa              >  1:1137646/1‑150 (MQ=255)
                                                                                                                                    gAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAc             >  4:725403/1‑150 (MQ=255)
                                                                                                                                    caGCCAC‑ACCGCCCACACCGCAACCGCACCCGGCTAATGCGGAGCCAGAAGAACATGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCAGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACa            <  7:148539/150‑1 (MQ=17)
                                                                                                                                          a‑aGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTg       >  6:607257/1‑150 (MQ=255)
                                                                                                                                               |                                                                                                                                                      
ATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAA‑AGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCG  >  NC_000913/1708768‑1709060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑