Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9300CA29.9% 333.4 / 68.6 212P671Q (CCG→CAG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (120/28);  new base A (54/9);  total (174/38)
Fisher's exact test for biased strand distribution p-value = 5.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 214 total aligned reads displayed.

CCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708780‑1709080
                                                                                                                                                      |                                                                                                                                                      
       cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCGAACGCCCGCAACGGGGACCAGCGACCGGCtc                                                                                                                                                   >  5:722410/1‑148 (MQ=14)
        gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGCGCACAAGCCCGAAAACGCGAACAGCAAAAGGCTAAt                                                                                                                                                 >  3:110587/1‑150 (MQ=14)
           gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTGGCAGCGGCTATTGCCCGAGCGAACGCGAGAAAACCCGCACAGCACCAGGCTGATGAgg                                                                                                                                             >  8:1229657/1‑151 (MQ=14)
             cGCTATTGCCCGTGCCAAAGCTCGCAATCTTGAACAGGAACAGGCTAATTCCGACCCAGAACAACAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg                                                                                                                                           <  6:1191960/151‑1 (MQ=14)
              gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTGGCAGCCGCTATTGCCCGCGCCCAAGCCCGCAAACGCGACCAGCAACAGGCTGAAGCGGAGc                                                                                                                                          >  2:359340/1‑151 (MQ=14)
               cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCTAAAGCCAGCAAACGGGCCCAGCACCAGGCGAATGCgcgggc                                                                                                                                         >  5:854464/1‑146 (MQ=14)
                 aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCGCACGCCAACAAACAGCAACAGCGACAGGCTAATGCGGAGcc                                                                                                                                         >  1:511802/1‑149 (MQ=14)
                 aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCTCGCAAACGGGAACAGCAACCGGCTAATGAGGAGCCa                                                                                                                                        >  2:191045/1‑150 (MQ=255)
                  ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAACGCGCGCAAACGCGAACAGCAGCAGGCTCATGAGGAGcccg                                                                                                                                       >  3:1600843/1‑148 (MQ=17)
                         tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGACCAGCAACCGGCTAATGAGGAGCCAGAAGAAc                                                                                                                                 >  7:367228/1‑149 (MQ=255)
                           ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCGCGAGCCAAAGCGCGCAAGAGGCCACAGCAACCGGCTAATGCGGTGCCAGAAGAACAGGt                                                                                                                             >  8:476345/1‑151 (MQ=14)
                             aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGCGCGCACGCCACCAAACCCGCACAGCAGCAGGATACTTCGGACCCcgaagacgaggatc                                                                                                                           >  5:1329957/1‑143 (MQ=2)
                             aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAACGCCAGCAAACGGGAACAGCAGCAGGCTCATGGGGGACGAGAAGAACACGTTg                                                                                                                           >  8:86888/1‑151 (MQ=11)
                               aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGCAGCCAGAACAACAGGTGGa                                                                                                                          >  7:911873/1‑150 (MQ=255)
                                   ctcAAGCTTGAACAGCATCATGCTAATGCGGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt                                                                                                                         <  6:930628/145‑1 (MQ=14)
                                    gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGAGCTAAGAAGACGTCGAAGCCGCTATTGAGAGACCCGAAGCGAGCAACCGGGACCAGCAACCGGCTAATGAGGAGCCAGAAGAACAGGTTGATCcg                                                                                                                      >  5:368660/1‑149 (MQ=14)
                                          tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCACAAGCCAGCAAACGGGCCCAGCAACCGGCTAATGCGGAGCCAGAAGAGCAGGTTGATCCGCGCAGAGc                                                                                                              >  6:1028390/1‑151 (MQ=14)
                                           tgAACAGCAACAGGCTAATGCGGACCCACAACACGTGAGCGCTCGGCCCAAAGCCGCGGTGGACCGCGCTATGGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGc                                                                                                              <  3:806209/149‑1 (MQ=14)
                                            gAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCGAACGCCAAAAAACCCGAACAGCAAAACGATAAAGAGCAGAAACAAGAACAGTTTGAtaagagaaaagc                                                                                                              >  4:628084/1‑138 (MQ=2)
                                               catcttcAGGCTAATTACGACGCAGAAAAACTTGCTGATCCTCGTAAAGCTGCCGTTGAAGCAGCTATTGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGcag                                                                                                         <  6:1606580/145‑3 (MQ=11)
                                                aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGACGCGGCTATTGCCCGCGCGCACGCGCGCAAACCGGCCCAGCACACGGCTCATGCGGAGCCAGAAGAGCAGGTGGATCCGCGCACAGCGGCGGt                                                                                                        >  5:884181/1‑151 (MQ=14)
                                                  cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGATAATGCGGAGCCAGAAGTACAGGTTGATCAGCGCAAAGCTGCAGtgc                                                                                                      >  6:771316/1‑149 (MQ=17)
                                                  cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACAGGATAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAATCTGCAGt                                                                                                        >  8:92325/1‑149 (MQ=14)
                                                  ataaaGGCTACTGCGTAGACAGATCAACAGGTTGTTGCGCTCAATCTTTCCGTCGACGACGCTATTCCGAGCTCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc                                                                                                       <  4:530041/146‑1 (MQ=9)
                                                   aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTACTGAGGAGCGACGAGAAGAGGTTGATCCGAGCCAAGATGGGGTCg                                                                                                      >  2:776584/1‑150 (MQ=14)
                                                   aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAACCGCGACCAGCACCAGGCTAAAGAGGAGCCAGAAGAACATGTAGATCAGCGCAAAGCTGCAGTCgc                                                                                                     >  5:602157/1‑150 (MQ=14)
                                                   aaCAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGAGCAAAAGCGCGAAAACGCGACCAGCACCAGGATAAAGCGGAGCCAGAAGAACAGGTTGATCCGCGAAAAGCGGcagatgc                                                                                                     >  4:875071/1‑145 (MQ=14)
                                                    aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCAAGCCCGCAAACCGGAACAGCACCCGGCTAATGCGGAGCCCGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGac                                                                                                    >  5:18069/1‑150 (MQ=14)
                                                      aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGCACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCAGTCgccgc                                                                                                  >  3:630807/1‑147 (MQ=14)
                                                      aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTTGACGc                                                                                                  >  3:41793/1‑151 (MQ=14)
                                                          tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGACGAGGCt                                                                                              >  3:1387365/1‑151 (MQ=255)
                                                               cggaaccAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAAAAACCGCGAACAGCACCAGACAAATGAAGAGCCAGAAGAACAGGAAGATACGAGCAAATAGGCAGTATAAGCGGCTAATGc                                                                                         >  1:136925/6‑151 (MQ=0)
                                                               ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGc                                                                                         >  2:281246/1‑151 (MQ=255)
                                                                  aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCGATTGCAcc                                                                                      >  3:725300/1‑150 (MQ=14)
                                                                  aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTTGCCGCGGCTATTGCCcg                                                                                      >  1:179056/1‑151 (MQ=14)
                                                                   gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGAGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCcgc                                                                                     >  1:1164649/1‑151 (MQ=14)
                                                                     cAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAAAAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCAGCGCAAAGCGGCCGTCGCCGCGGCTAGTGcgggcgg                                                                                   >  3:942542/1‑145 (MQ=11)
                                                                         acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGtt                                                                                                                            <  5:1370038/106‑1 (MQ=255)
                                                                               ggccGATCCCCGGAAATCTGCCGTCGAAGCAGCTATGGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGc                                                                         <  8:828580/148‑1 (MQ=14)
                                                                               ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGAGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCCAAGCCCGc                                                                         >  8:1600471/1‑151 (MQ=255)
                                                                                gcgcctcccctcAAACCCGCCGTCGAAGCCGCTATTTCCGTATCCAAATCTCGCAAGCATTAACAGCATCAGGCTTTTTCTGTACCAGAAGACCCTGCTGATCCGCTCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa                                                                        <  5:351088/140‑1 (MQ=255)
                                                                                  cgctCCGCCCACAGCCCCCCCCCACGCCGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAg                                                                      <  7:752208/148‑1 (MQ=21)
                                                                                   gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCCCGCGCCAACGCACGCaacc                                                                     >  1:695552/1‑149 (MQ=17)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAGCAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCCCGCGCGAAGGCaagcaagcg                                                                    >  8:742219/1‑150 (MQ=17)
                                                                                      ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCCCGCGCGAACGCACGCAAGCAgg                                                                  >  5:759847/1‑151 (MQ=255)
                                                                                      ccGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCGCGCAAACGCGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGAAAGCGCAAAAGCaaaaaaacagg                                                                  >  1:778199/1‑141 (MQ=17)
                                                                                        gcgcAAAGCCGCCGGGGCAGCCGCTATTTCCCGCGCCAAAGCGCGCAAACGGGCACAGCACCCGGGTAATTCGGGGGCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCACCCGCTAATGGCCGCGCCCAAGCCCCCAAGCgggcc                                                                >  2:421506/1‑149 (MQ=12)
                                                                                         cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                                               >  2:860069/1‑151 (MQ=255)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCACACGGGAACAGCAACCGGCTAATGCGGAACCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCAAGCGCCAATGCACGCAAGCGGGAACAGc                                                            >  4:1533607/1‑151 (MQ=17)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCGGCACCCGGGTAATGCGGAGCAAGAAGACCAGGTTGATCCGCGCAAAGCGCCCGTGGACGCGGCTATTGCCCGCGCCAAGGCCCCCACGCGGGACCAGc                                                            >  8:1115896/1‑151 (MQ=14)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAACCTGGACCAGc                                                            >  2:1462022/1‑151 (MQ=255)
                                                                                             aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCAGGAACAGc                                                            >  2:1339821/1‑150 (MQ=255)
                                                                                              aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcgcg                                                                                                                    <  8:1369783/93‑1 (MQ=255)
                                                                                              aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCa                                                           >  5:1121310/1‑150 (MQ=255)
                                                                                                ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                                                         >  6:646300/1‑150 (MQ=255)
                                                                                                ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGCTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa                                                        <  4:1362363/151‑1 (MQ=255)
                                                                                                 cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                                                         >  7:638007/1‑149 (MQ=255)
                                                                                                  gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTAGAACAGAAACCGGGAAATGAGGAAAAAGAAGAACAGGATGATCAGCGAAAAGCTGCAGTCGCAGACGATATAAAAAGAGCCAAAGCCCGGAAGCTCGatcggaagaggg                                                      >  6:1495731/1‑140 (MQ=2)
                                                                                                  gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAACGCAAGCACGCATGACCAGCGACa                                                        >  4:370940/1‑149 (MQ=17)
                                                                                                  cacccgcactccGCTATTGCCCGTGCCAAATCTATAAATCTTGAACAGCAACAGGCTAATTAGCATACAGAATAACATGTTTATCCTCTCAAAGCTGAAGTCTAATCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg                                                      <  1:366560/141‑1 (MQ=2)
                                                                                                    cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCATCAGGCt                                                    >  8:1573983/1‑151 (MQ=255)
                                                                                                     gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAAAGCCCGCAAGCTCGAACAGCATCAgggt                                                    >  2:722505/1‑148 (MQ=17)
                                                                                                     gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCATGCAAGCGGGACCAGCAGCAGGCtt                                                   >  8:512886/1‑150 (MQ=255)
                                                                                                     gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCACAAGGCt                                                    >  6:869027/1‑150 (MQ=255)
                                                                                                     gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGATGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCt                                                    >  1:557505/1‑150 (MQ=255)
                                                                                                     gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGCTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCACGAACAGCAAAAGCCt                                                    >  6:284831/1‑150 (MQ=17)
                                                                                                         aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAGGCACGCAAGCTGGAACAGCAGCAGGCTAATGc                                               >  1:1018949/1‑151 (MQ=255)
                                                                                                          aGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCCCGCGCAAAAGCAAGCAAACGCGAACAGCAACAGCCGAAtacc                                              >  1:907099/1‑148 (MQ=18)
                                                                                                            ccGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCGAAAGCACGCAAGGAGGAACAGCAACAGGCTCATCCGGt                                            >  8:560450/1‑151 (MQ=25)
                                                                                                            ccGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCGGGCACAGCAACAGGCTAATGCGGt                                            >  8:1272397/1‑151 (MQ=255)
                                                                                                            ccGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGt                                            >  5:1498980/1‑151 (MQ=255)
                                                                                                            cagCTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCt                                                                                                                                                    <  2:1104200/45‑1 (MQ=255)
                                                                                                              gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGACGACGAGCCTAGTGCACTCGCCAAAGCTCGCCAGCTGGAAGAGCAACAGGCTAATGCGGTAc                                          >  7:1233466/1‑151 (MQ=25)
                                                                                                               cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc                                         >  7:22428/1‑151 (MQ=255)
                                                                                                               cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAACGCCAGCAAGCGGGAACAGCACCAGGGTAATGCGGTagc                                         >  6:1347004/1‑149 (MQ=21)
                                                                                                                 atcgCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc                                                                                                  <  2:1640394/89‑1 (MQ=11)
                                                                                                                   tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCaga                                      >  5:300203/1‑150 (MQ=255)
                                                                                                                    gCCCGCGCCAAAGCGCGCAACCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCt                                                                                                             <  3:1433402/78‑1 (MQ=14)
                                                                                                                    gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTACCaga                                      >  7:1543575/1‑149 (MQ=255)
                                                                                                                      ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGACCAGCACCAGGCTAATGCGGTCCCagaagac                                  >  1:1188163/1‑150 (MQ=255)
                                                                                                                       cGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGATAATGAGGTACCAgaagaa                                  >  1:1137646/1‑150 (MQ=255)
                                                                                                                        caGCCACACCGCCCACACCGCAACCGCACCCGGCTAATGCGGAGCCAGAAGAACATGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCAGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACa                                <  7:148539/150‑1 (MQ=17)
                                                                                                                             aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAGCAGAAGAACAGGtgg                           >  2:481422/1‑149 (MQ=255)
                                                                                                                                  gcgcAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCa                                                                                 <  8:507218/92‑1 (MQ=11)
                                                                                                                                  gcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCcg                      >  7:441348/1‑151 (MQ=255)
                                                                                                                                       aaCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCGGTTCCAGAAGAACACGTTGCTCcgccaa                  >  1:829723/1‑147 (MQ=255)
                                                                                                                                        aCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCAGCGaaa                 >  2:1379140/1‑150 (MQ=255)
                                                                                                                                          tggAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCg                                                                                                      <  5:1421392/62‑1 (MQ=255)
                                                                                                                                          tggAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCTGCCGTCg                                                                                                      >  1:1428529/2‑63 (MQ=11)
                                                                                                                                              aCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGCTCCGCGCAAAGCGGc           >  6:761511/1‑150 (MQ=255)
                                                                                                                                              aCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGACCAGCAACAGGCTAATACCGTACCAGAAGAACAGGTAGATAAACGCAAATCgcc           >  1:154432/1‑148 (MQ=21)
                                                                                                                                                aGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATCCGGTCCCAGAAGACCAGGTTGATCCGCGCAAAGCGGCAGt        >  7:549511/1‑151 (MQ=255)
                                                                                                                                                 gCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGCTCCGCGCAAAGCGGCAGtt       >  2:606923/1‑151 (MQ=255)
                                                                                                                                                 gCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCTGCCGTAGAAGCCGCTATTGCACCCGCCAAAGCACGCAAGCTGGACCACCAACAGGATAATTCGGTCCCTGAATCACACGATGATCCGAGCAAACCGGCAGtt       >  3:128452/1‑151 (MQ=255)
                                                                                                                                                   aaCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGACCAGGTTGCTCCGCGCAAAGCGGCAGTTGc     >  7:1104278/1‑151 (MQ=255)
                                                                                                                                                   aaCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGc     >  3:692087/1‑151 (MQ=255)
                                                                                                                                                   aaCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGc     >  3:1012659/1‑151 (MQ=255)
                                                                                                                                                   aaCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATACGCGAACAGCGGCAGttcc     >  2:9818/1‑149 (MQ=255)
                                                                                                                                                    aCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCACGCGCAAAAGCCCGCAACCACGAACAGCACCAGGCTAATGCCGAACCAGACCAACAGGTAGATCAGCGCAAAGCGGCAGTTGcc    >  4:28835/1‑151 (MQ=25)
                                                                                                                                                      cGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGCACAGCACCAGGCTCATGCGGTACCAGAAGCACAGGTTGATCCGCGCAACGCGGCAGTTGCcgc  >  8:379630/1‑151 (MQ=38)
                                                                                                                                                      |                                                                                                                                                      
CCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708780‑1709080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑