Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,269,9940GT25.6% 270.4 / 25.3 194intergenic (+392/+631)yhaC/garKpentapetide repeats‑related protein/glycerate kinase I
Reads supporting (aligned to +/- strand):  ref base G (12/110);  new base T (0/42);  total (14/180)
Fisher's exact test for biased strand distribution p-value = 3.77e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 197 total aligned reads displayed.

GAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTT  >  NC_000913/3269845‑3270129
                                                                                                                                                      |                                                                                                                                       
gAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTg                                                                                                                                         <  8:199118/150‑1 (MQ=255)
 aaaCCGGCCGGAACGGTTTATTACGTACATCAGGTAAAACTTACCGATAAGCCGCTTTCTTTTGGTTATCGTGTCGT‑GACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGaaa                                                                                                                                      <  1:1103500/151‑1 (MQ=17)
  aaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGaaa                                                                                                                                      <  4:1622971/151‑1 (MQ=255)
  aaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGaaa                                                                                                                                      <  3:1359691/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                    <  8:1338908/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                    <  4:787436/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                    <  5:109177/151‑1 (MQ=255)
    cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACt                                                                                                                                    <  1:621719/151‑1 (MQ=255)
     ccgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTg                                                                                                                                   <  4:1276977/151‑1 (MQ=255)
     ccgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTg                                                                                                                                   <  6:889202/151‑1 (MQ=255)
       gccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTACAAAAGAAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGAGaaaggga                                                                                                                                  >  1:946601/1‑146 (MQ=17)
        ccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGAcc                                                                                                                                <  8:611077/151‑1 (MQ=255)
         cgGATCGGTTTTTTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAACCAGGTGAAACTGACCg                                                                                                                               <  1:1235547/151‑1 (MQ=255)
         cgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCg                                                                                                                               <  3:1517582/151‑1 (MQ=255)
          ggAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGa                                                                                                                              <  4:1400927/151‑1 (MQ=255)
           gtaCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGAt                                                                                                                             <  8:1241262/149‑1 (MQ=255)
           gAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGAt                                                                                                                             <  1:1128341/151‑1 (MQ=255)
           gAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGT‑AAACAGGTGAAACTGACCGATa                                                                                                                            <  7:1455571/151‑1 (MQ=255)
            cgcccgatcttaCGTACCTCAGGCCCAACTGACCGATAAGCCGCTTTTTTTTTTGTATACCGGCGTGGACAGTGATTTATCTTTTTGCCTATACTATTTCAAAACACCTCGGTAT‑TGGGTTTTTACGTAAATCAGGTTAAACTGACCGATa                                                                                                                            <  2:1021134/142‑1 (MQ=2)
             aCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATaa                                                                                                                           <  1:246721/151‑1 (MQ=255)
                ttttATTTCGTAGATCAGGTAAAACTGAGCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGc                                                                                                                         <  2:1647290/149‑1 (MQ=255)
                   tattaCGTACATCAGGTAAAAATGACCGATAATCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAGTCATTCATATTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGc                                                                                                                      <  3:254943/150‑1 (MQ=255)
                       aCGTACATCAGTTAAAACTGACCGATAAGCCGCTTTCTTTTGTTTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttct                                                                                                                 <  2:448707/151‑1 (MQ=255)
                       aCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttc                                                                                                                  <  7:245922/150‑1 (MQ=40)
                         ggaCATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttcttt                                                                                                               <  3:1007202/149‑1 (MQ=39)
                           aCATCATTTAAAACTTTGCGTTAAGCTGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCACTCCAAAAGTAAAAACCCGCCGAAT‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCtttt                                                                                                              <  1:659943/150‑1 (MQ=11)
                            cATCAGGTAACACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGGCGCCTGTGATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGCAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTgg                                                                                                            <  1:1539702/151‑1 (MQ=14)
                            cATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATATTTGTGGCCCACCAAAAATAAAAAAACGGCGCAC‑CGCGAGTTAACGTAAAAAAAGTCGAACTGACGCATAAGCCggattaaaatct                                                                                                            >  7:125753/1‑140 (MQ=9)
                             aaaatttAAGACTTACCGATAATCCGCTTTCTTTATTCTCGAGTCTCGGGGACAGTGAATTTTATTTATGGCACTCAAAAAGGAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTggg                                                                                                           <  3:1612568/145‑1 (MQ=2)
                             aTCAGGTAAACCTGTCGGTTTAGCCGCTTTCTTTTGGGTCGTGTGGCGTGGACAGGCACTCTTATTTCTGCCACTCCAAAAGTAAAAACCCGCCGTAC‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTggg                                                                                                           <  7:1070818/151‑1 (MQ=11)
                               aaGGTAAAACTGACCGATAAGCCGCTGTCTTTTGGCTATAGTGACGGGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAC‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGta                                                                                                         <  3:962132/150‑1 (MQ=255)
                                 gtaaataCTGACCGATAAGCCGATTTCTTTTTGTTATAGTGTCGTGGAAAGGCTTTGATCTTTCTGCCCCTCCAAAATTAAAAACCCGCCGAAG‑CGGTTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGtat                                                                                                        <  1:767295/144‑1 (MQ=11)
                                  ttaaaaatttccGTTAAGCCGTTTTCTTTTTCCTATAGTGTCGCGGACTGTCTATCCTATTTCTGCCCCTCCAAAAGTATAAACCCGCCGAAC‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGtata                                                                                                       <  4:25535/140‑1 (MQ=11)
                                  gTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTCTAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGtata                                                                                                       <  6:425773/150‑1 (MQ=25)
                                   aatcaCTTACCGATATGCCGCTTTCTTTTGTCTATAGTCTCGTGGACAGGCCTACTTCTATCTCCCACTCCAAAAGTAAAAACCCGCCGAAC‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgt                                                                                                     <  1:1405695/147‑1 (MQ=11)
                                    aaaaCTGAGCGATAAGGTGCTTTCTTTTGTTTATTGTGTCGTGGACAGTCATTCTTCTTTCTGCCACTCCAAAAGTATAAACCCGCCGAAT‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgtg                                                                                                    <  6:368320/151‑1 (MQ=11)
                                     ataatGACCGTTAAGCCGCTTTCTTTTTGCTTAATTGTCGTGGACAGTGTTTATTCTTTATGGCCCTCCAAAAGAATAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgtgt                                                                                                   <  3:394716/147‑1 (MQ=11)
                                     aaaCTGACCGATCATCCGATTTCTTTTGGGTATAGTGTCGAGGACAGTGATTCTTCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAC‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgtgt                                                                                                   <  3:1536185/151‑1 (MQ=11)
                                      aacttagcgatcattcGCTTTCATTTGTTTTTCGTGTCGTCGACAGTGTCACAAATATCTGCCACTCAAAAAGAACAAACCCGCCGAAT‑CGGTTTATTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTc                                                                                                  <  4:1007020/136‑1 (MQ=2)
                                      aaCTGACCGATCTGGCGCATTCATTTTGCTACAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAATTAAAAACCCGCCGAAC‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTc                                                                                                  <  5:1193146/151‑1 (MQ=11)
                                        cTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGGCAATCATAGTTGCGCCCCAACAAAACGAAAAACCCGCCGAAGACGGGGGTTAAC‑TAAAACAGGTGAAAAAGACCCCTAAGCCCGCTTCTCTCGGGtatactccagg                                                                                                >  3:1280221/1‑144 (MQ=2)
                                          taCCGATAAGCCGCTTTCTTTTGGCTATAGTGTCGTGGACAGCCATTCTTCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTg                                                                                               <  1:104688/149‑1 (MQ=255)
                                          gACCGATAAGCCGCTTTCTTTTGCCTATCGTGTCGTCGCAAGTCTTTCATATTTCTGCCCCTCCAAAAGTTAAAACCCGCCGAAT‑CGGGTTATTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTg                                                                                               <  2:733355/150‑1 (MQ=11)
                                           agcGATCAGCCGCTTTCATTTTATTCAAGTCTCGTCGAATGTCATACCTATATCTCCCACTCCAAAAGTATAAACCCGCCGCAG‑CGGGTTTTTACGTACATCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTgg                                                                                              <  3:602235/148‑1 (MQ=2)
                                           aCCGATAAGCCGCTGTCTTTTTGCTCTAGTGTCGTCGAAAGTCTATCCTCTTTCTGGCACTCCACAAGTAAAAACCCGCCGCAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGa                                                                                             <  3:539008/151‑1 (MQ=11)
                                            ccGATAAGATGCATTCTTTTGTGTATCTTGTCGTCGCATGTGTTTTTTCTTTATGGCACTCAAAAATTATAAACCCGCCGTAT‑CGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGa                                                                                             <  4:1428406/150‑1 (MQ=2)
                                                 attgcGCATTCTTTTGTGTCTTGTGTCGTCGAAAGTCATTGATCTTTATGCCACTCAAAAAGTTAAAACCCGCCGAAT‑CGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtc                                                                                        <  6:1094325/146‑1 (MQ=11)
                                                    gggCTTTCTGTTTCGTATAGTGTCGCGGACAGTGACTCCTCTTTCTGCCCCTCCACAAGCAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcattc                                                                                    <  7:1527122/149‑1 (MQ=11)
                                                    ccGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTTTTggggag                                                                                                        >  8:129702/1‑128 (MQ=255)
                                                     ggCTTTCTTTTGTCTATCGTGTCGTGGACAGTCTTTCATCTTTCTGCCCCTCCAAAAGTACAAACCCGCCGCAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcattca                                                                                   <  5:1020648/150‑1 (MQ=11)
                                                             ttttttttttgtgtCGTGGACTGTGATTGTTATTTCTGGCACTCCAAAATTATAAACCCGCCGTAT‑CGGGTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCttt                                                                              <  6:975606/138‑1 (MQ=11)
                                                             ttttcctctaGTGTCGCGGACTCTCTTACATCTATCTCGCACTCAAAAATTATAAACCCGCCGGAT‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCt                                                                            <  2:1107705/142‑1 (MQ=11)
                                                             ttagcgTATCGTGTCGGGGAAAGGGATTCTTCTTTCTCCCCCTCCAAAAGCAAAAACCCGCCGCAC‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCttt                                                                              <  5:420067/143‑1 (MQ=11)
                                                              ttGGGTATCGTCACGTGGACTGGGACTCTTCTTTCTGCCCCTCCAAAAGGAAAAACCCGCCGTAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTg                                                                           <  7:1226568/150‑1 (MQ=11)
                                                                gccgctcgtgtCGTCGAAAGCGATTCTTATATCTGCCACTCAAAAAGCACAAACCCGCCGCAT‑CGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGcc                                                                         <  5:1366459/143‑1 (MQ=11)
                                                                 ggTATAGGTTCGTGGAGAGTCATTCATCTATCTGCACCTCCAAATGT‑AAAACCCGCCGAAC‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCt                                                                      <  1:1258823/151‑1 (MQ=11)
                                                                  ggcttgtgtCGTCGACTGTGTCTCCTATTTATCCCACTCAAAAATTACAAACCCGCCGAAC‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCt                                                                      <  6:1629263/146‑1 (MQ=11)
                                                                       gtgtCGTGGACAGTGATTGATCTATCTGCCACTCCAAAAGGAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaa                                                                 <  7:609163/151‑1 (MQ=11)
                                                                         gtCGAGGAAAGTCATTCATCTTTCTCGCACTCCAAAAGTAAAAACCCGCCGTAT‑CGGTTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAg                                                               <  8:472564/151‑1 (MQ=11)
                                                                            ggtgcgaGTCATACATCTTTCTCCCACTCAAAAATTACAAACCCGCCGCAG‑CGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCaa                                                            <  5:1627965/145‑1 (MQ=11)
                                                                                caagcgttagctCTTTCAGCCCCTCGCCAAGTTTAAACCCGCGTTAT‑CTGGTTTTTACGTAAATCTTGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGCaaaaa                                                         <  1:335592/139‑1 (MQ=2)
                                                                                aatgggtaagctatttCTGGCACTCAAAAATTACAAACCCGCCGTAT‑CGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAc                                                        <  1:399323/138‑1 (MQ=11)
                                                                                   gtgttttttatttCTGGCACTCAAAAAGCTTAAACCCGCCGCAT‑CGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAccc                                                      <  6:706603/140‑1 (MQ=11)
                                                                                   gtggttcctCTTTCTGGCACTCAAAAATGAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccg                                                     <  3:662954/147‑1 (MQ=11)
                                                                                   gtcttttctatttCTGGCACTCAAAAATTTCAAACCCGCCGAAT‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAccc                                                      <  4:291475/140‑1 (MQ=11)
                                                                                           tatatatcgcacTCAAAAATTATAAACCCGCCGTAT‑CGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGc                                              <  6:417674/139‑1 (MQ=11)
                                                                                            atttatggcacTCAAAAATTAAAAACCCGCCGTAT‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCg                                             <  6:2610/140‑1 (MQ=11)
                                                                                            atttatggcacTCAAAAATTAAAAACCCGCCGAAG‑CGGTTTTTTACTTAAAACAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCgg                                            <  5:341234/141‑1 (MQ=11)
                                                                                              atcgggcccTCCAAAAGCATAAAGCCGCCGTAG‑CGGTTTATTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCg                                             <  5:608620/142‑1 (MQ=11)
                                                                                                  ggcacTCAAAAATTATAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGttttt                                      <  1:523733/147‑1 (MQ=255)
                                                                                                  gCCACTCAAAAATTAAAAACCCGCCGAAG‑CGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGttttt                                      <  1:1340914/151‑1 (MQ=11)
                                                                                                  cccccTCCACAAGGACAAACCCGCCGCAG‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGttttt                                      <  7:494044/150‑1 (MQ=255)
                                                                                                    cccTCAACAAGCACAAACCCGCCGCAG‑CGGGTTATTACGTACAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc                                    <  5:1256580/151‑1 (MQ=11)
                                                                                                     ccTCCACAAGCACAAACCCGCCGAAG‑CGGGTTATTACGTACAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg                                   <  5:1207192/151‑1 (MQ=11)
                                                                                                     acTCAAAAAGTTCAAACCCGCCGTAT‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg                                   <  2:1608546/150‑1 (MQ=11)
                                                                                                       tCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCGTTCTTTAGTGTATAGTCTAGAGTAAAGGCATGCAAAATTAAGCACCAGCAAAACCAATAACCCGCCGCAgaacgtggatacct                                  >  2:654499/1‑137 (MQ=2)
                                                                                                          acaagcagaaaCCCGCCGCAC‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAc                              <  5:1182652/143‑1 (MQ=11)
                                                                                                          aaaaTTATAAACCCGCCGTAT‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAc                              <  6:521738/151‑1 (MQ=11)
                                                                                                          aaaaGCAAAAACCCGCCGAAC‑CGGGTTATTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAc                              <  5:1414477/151‑1 (MQ=12)
                                                                                                           aaaGCAAAAACCCGCCGCAG‑CGGGTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAcc                             <  3:776774/151‑1 (MQ=16)
                                                                                                            aaGTAAAAACCCGCCGTAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCa                            <  6:1415693/151‑1 (MQ=38)
                                                                                                               cataaaCCCGCCGTAG‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAgg                          <  1:179246/147‑1 (MQ=255)
                                                                                                                 aaaaCCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGa                       <  4:299058/151‑1 (MQ=35)
                                                                                                                  aaaaCCGCCGTAT‑CTGTTTTTTAAGTAAATCATGTTAAACTGACCGATAAGCTGGTTTCTTTTTGGTATAGTGTCGTTGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGaa                      <  2:1256745/151‑1 (MQ=11)
                                                                                                                    aCCCGCCGCAG‑CGGTTTTTTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAc                    <  3:52485/151‑1 (MQ=255)
                                                                                                                    aCCCGCCGCAG‑CGGGTTTTTACGTAAAACAGGGGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAc                    <  7:1424988/151‑1 (MQ=25)
                                                                                                                        cccgAAT‑CGGTTTTTTACGTACATCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAc                <  5:771422/150‑1 (MQ=255)
                                                                                                                         gcgAAC‑CGTGTTTTTACGTATATCAGGTTAAACTGAGCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGGCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAcc               <  4:202419/150‑1 (MQ=11)
                                                                                                                          cgAAG‑CGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCg              <  8:1123427/151‑1 (MQ=25)
                                                                                                                               ccGGGTTTTTACGTAAAACAGCGGACACTGACCGATAAGCCGCTTTCTTTTGGGTCTAGTGTCGTGCACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATaa          <  5:958382/150‑1 (MQ=255)
                                                                                                                                cGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATaa          <  8:1504945/150‑1 (MQ=18)
                                                                                                                                 ggtttattACGTACATCAGGTCAAACTGACCGATATTATTTTTTATTTTTGGTATAGTTTCGTGGACATTAATTTATCTTTCTGCCTCTCCAAAATCTAAAAGCATCCGATGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGAt            <  6:1079663/141‑1 (MQ=255)
                                                                                                                                   ttttatAAGTAAAATAGCATAAACTTACCTATACGGATCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGcc       <  4:541898/149‑1 (MQ=11)
                                                                                                                                   tttattACGTAAGACAGCTTAACCTCAGCAATCAGCTGACTTCTTTTGTGTATAGTGGTGTTGACAGGCATTGCTATATATCCCACTCAACAATCTAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGcc       <  8:517430/146‑1 (MQ=2)
                                                                                                                                      attACGTACAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGCGTCTAGTGTCGTGGACAGGCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGct    <  7:893165/149‑1 (MQ=11)
                                                                                                                                       ttaagtacatgaGGTCATACTTATCGATAATCCGCTTTATTTTTTGTATAGTGTAGTGTATAGTGATTTTTATATATGCCACTCAAAAATCTTAAACCCGCCGTATCGGTTTTTTACGTAAACCAGGTTAAACTGACCGATAAGCCGctt   <  4:1516697/139‑1 (MQ=2)
                                                                                                                                       ttACGTAAAAAAGTTTAAACTTACCGATAAGCCGCTTTCTTTTTTGTATAGTGTCGTCGACAGTGATTCATCTTTCTGCCACTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGctt   <  7:41931/150‑1 (MQ=14)
                                                                                                                                        tacgttcatcAGGTGACAGTGCCGGTTAAGGCGCTTTATTTTGGTTATCGGGTGTGGGACTGGGATTCATCTTTCTGGCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTACACCAGGTGAAACTGACCGATAAGCCGcttt  <  7:915595/141‑1 (MQ=2)
                                                                                                                                                   ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGcc       <  8:855022/134‑1 (MQ=34)
                                                                                                                                                   ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAATCATATTTATTACCCAACAAAAGCAAAAAAAACCAGAAAAAGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGcc       >  2:855293/1‑134 (MQ=11)
                                                                                                                                                      |                                                                                                                                       
GAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTT  >  NC_000913/3269845‑3270129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑