Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913696,5340GT23.5% 248.1 / 29.0 119intergenic (‑30/+8)glnX/glnVtRNA‑Gln/tRNA‑Gln
Reads supporting (aligned to +/- strand):  ref base G (39/52);  new base T (2/26);  total (41/78)
Fisher's exact test for biased strand distribution p-value = 4.59e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 122 total aligned reads displayed.

GAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTC  >  NC_000913/696385‑696683
                                                                                                                                                     |                                                                                                                                                     
gaaCGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCACCTGGTTGCAGTTACATGTTCAGCGGCTTgt                                                                                                                                                      >  5:596880/1‑150 (MQ=21)
gaaCGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTg                                                                                                                                                       <  5:389671/150‑1 (MQ=255)
  aCGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAAt                                                                                                                                                    <  1:512036/151‑1 (MQ=255)
  aCGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAAt                                                                                                                                                    <  6:516808/151‑1 (MQ=255)
    gCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATa                                                                                                                                                   <  3:707368/150‑1 (MQ=255)
    gCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATa                                                                                                                                                   >  4:709590/1‑150 (MQ=255)
      aGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAAt                                                                                                                                                <  7:564719/151‑1 (MQ=255)
      aGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCATGGGTACGGCTCAGGTGGGTTCACGCGTGGCGATAAGCCAGCTGGGTGCACGTAGTAGGGTTGCGTCTTGAATattt                                                                                                                                                >  2:356216/1‑148 (MQ=255)
       gAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAAtt                                                                                                                                               <  6:109297/151‑1 (MQ=255)
       gAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAAtt                                                                                                                                               <  5:1545954/151‑1 (MQ=255)
         aaaGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGATTCCGGTGCCTTACCGCTTGGCGATACCGGCACTGGGTGCAATTAGAAGGTACGCGTGTTGATTATAtttg                                                                                                                                             >  5:1432657/1‑149 (MQ=21)
         aaaGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTgg                                                                                                                                             <  3:275721/151‑1 (MQ=255)
            gCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCTGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTg                                                                                                                                          <  3:1556583/151‑1 (MQ=255)
             cAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTgg                                                                                                                                         <  7:1389550/151‑1 (MQ=255)
              aaaaaGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTggg                                                                                                                                        <  8:1236653/151‑1 (MQ=255)
              aaaaaGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGATGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTggg                                                                                                                                        <  4:526086/151‑1 (MQ=255)
                aaaGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGt                                                                                                                                      <  7:871336/151‑1 (MQ=255)
                 aaGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGGCGGAATCAGAATCCGGTGCGTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTa                                                                                                                                     <  1:773120/151‑1 (MQ=255)
                 aaGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTa                                                                                                                                     <  1:1458389/151‑1 (MQ=255)
                 aaGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTa                                                                                                                                     <  1:51007/151‑1 (MQ=255)
                  aGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTAc                                                                                                                                    <  6:1523413/151‑1 (MQ=255)
                  aGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTAc                                                                                                                                    <  1:951480/151‑1 (MQ=255)
                       gCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGa                                                                                                                               <  1:1117547/151‑1 (MQ=255)
                         ggtaGCGAGGTTTTTTAATGTGGCTTGGGTAGGAGGAATCGTTCCTCGGAATGCCGGACTCAGAATCCTGTGCCTTACCGCTTGGCGCTACGCCAACTGGGTGCACTTACACCGTACGCGTCTTGAATAAATTGGCTGGGGTACGAGGAtt                                                                                                                             <  3:1367997/148‑1 (MQ=255)
                         ggAAGAGAGCTTTTTTAATGTTGCTGGGGTACGAGGATTCGATCCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGAtt                                                                                                                             <  4:247766/150‑1 (MQ=255)
                         cGAAGCGATCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTGGGAATGCCGTAATCAGTATCCGGTGCCTTACCGCTTGGCGATACCCCAGCTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGAtt                                                                                                                             <  2:1224838/151‑1 (MQ=255)
                         cGAAGAGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCTGAATCAGAATACGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCTTCTTGAATAAATTGGCTGGGGTACGAGGAtt                                                                                                                             <  1:52550/151‑1 (MQ=255)
                          gAAGCGAGCTTTTTTAATGTGGCCGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTCGTTGCAATTAAAAGGTAAGCGTCTTGAATAAATTGTCTGGAGTACGAGGATTc                                                                                                                            >  7:270337/1‑151 (MQ=21)
                           aaGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCg                                                                                                                           <  1:404982/151‑1 (MQ=255)
                              cGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCTAGCATCGGAATGCGGGAATCAGAATCAGGTGCCTTAACGCTTGGGGATACGCCAACAGGTTGCAATTAAAATATAAGCGGCTAGAGGATAGTGGCAgggggtgggggctgcgagg                                                                                                                        >  8:254042/1‑136 (MQ=255)
                               gAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGAAAACCCAACTCGGTGCACTTACAATGTAAGCGTCTTGAATAAATTGGCTGGGGTTCGTGGATTCGaccg                                                                                                                       >  3:1336173/1‑148 (MQ=25)
                                ggtttttttttttTGGCTGGGGTACGAGGACTAGATACTCGGAATGCTGGTATGAGAATCCGTTGACTTAGCGCTTGTCGTTTCGCTAACTGGGATCAATTACAAGGTAAGGGTCTTGAATAATTTGGCTGGGGTACGAGGATTCGAACCt                                                                                                                      <  2:884874/148‑1 (MQ=255)
                                aGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCTGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCTATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCt                                                                                                                      <  3:651057/151‑1 (MQ=255)
                                aGCTTTTTTAATGTCGCCGCGGCACGATGAGACGATACAGGGAAGGCGCTAATCAGACAACTTCGCCTTACCGCTTGGCGATACCCCCACACGCATCAATCACAACGAACGCGGCTTGATTAATTTGGCTGGGGGACGAGGATTCGAACCt                                                                                                                      <  3:311841/151‑1 (MQ=255)
                                 gCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTc                                                                                                                     >  5:365150/1‑151 (MQ=255)
                                     ttttAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGGTGTTCCAAGGGAAGAGGCTTGAATATAGTGGCTGCGGTTCGTGGCTTCGacggtcgg                                                                                                                   >  5:1418579/1‑142 (MQ=17)
                                       ttAATTTTGCTGGGGTACGAGGATTCGAAACTCGGAATGCCTGAATCAGAATCCTGTGCATTACCGATTGGCGATACCCCAACTTGGTTCACTTACAAGGTAAGCGTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAAt                                                                                                                <  1:56551/150‑1 (MQ=255)
                                       ttAATGTGGCTGGGGTACGAGGAGTCGCCCCTCGGAATGCCGGAAGCAGACTCCTGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTACGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAAt                                                                                                                <  2:953716/150‑1 (MQ=37)
                                        tAATGTGGCTGGGGGAGGAGGTTTCGATCCTCGGAATGCCTGAATCAGAATACGGTGCCTTCGCGCTTGTCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATg                                                                                                               <  7:1059466/150‑1 (MQ=255)
                                        tAATGTCGCTGGGGGACGAGGATTCGACCCTCGGAATGCCGGAATCAGACTCCGGTGCCTTAGCGCTTGGAGATACCCCAAATGGGTGCACTTACACGGTAAGCGTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATg                                                                                                               <  5:1309495/150‑1 (MQ=255)
                                        tAATGAGGCTGGGGGACGAGCTTTCGATACTCTGAATGAGTTAATCAGAAAACGGTGCCTTACACCTTGTAGATACCCCAACTGGGTTAACTTTCAAGGTAAGCTGCTTTATTAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATg                                                                                                               <  8:577046/150‑1 (MQ=16)
                                          aTGTCGCGGGGGCACGCGGCCTCGAAACTCGGAATGCCGGAAGCAGAAACCCGGGCCTTCCCGCTTGCCGCTACCCCAACTCGGTGCACTCACACCGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCg                                                                                                            <  6:1572148/151‑1 (MQ=25)
                                              ggCGGGGGGACGAGGCTTCGAACCTCTGAATGCCGGAAGCAGACTCCCGTGCCTTACCGCTTGGCGCTACCCCAACTGGGTGCACTCACCAGGAACCCCTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAAt                                                                                                        <  6:934685/151‑1 (MQ=25)
                                               gCTGGGGTACGAGGATTCGATCCTCGGAATGACTGAATCAGAATCCTGTGCATTACAGCTTGGCGATACCCCAACTGGGTGCACTTTCAAGGTAAGCTTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATc                                                                                                       <  1:1431017/151‑1 (MQ=38)
                                                cgggggCACGAGGAGTCGCTCCTCGGAATGCCCCAATCAGAATCCGGCGCCTTCCCGCTTGCCGCTACCCCAACTGGGTGCACTTACAAGGTACGCCTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCa                                                                                                      <  6:1293907/149‑1 (MQ=25)
                                                 tGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTg                                                                                                                                          <  4:1382889/114‑1 (MQ=255)
                                                 tGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTg                                                                                                                                          >  3:1377757/1‑114 (MQ=255)
                                                 gggggTAGGAGGAGTCGAAACTCGGAATGCCGCCAGCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCCACTGGCTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAg                                                                                                     <  3:1297892/150‑1 (MQ=37)
                                                  ggggTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGTTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAgc                                                                                                    >  4:1341297/1‑150 (MQ=255)
                                                  ggggGACGAGGCCTCGACACTCGGAAGGCCCGAACCAGAATCCGGGGCCTTACCGCTTGGCGAAACCCCAACTGGGTGCACTTACACGGTACCCGGCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGa                                                                                                    <  5:1008931/151‑1 (MQ=25)
                                                    gggaggaggagTCGAGACTGTGAATGACGCAATCAGACACCGGCGCCTTACCGCTTGCCGCTACGCACAATCGGTGAACTTACAAGGTACGGCTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAAt                                                                                                  <  5:1554498/146‑1 (MQ=12)
                                                        cgcggattgcatccTCGGAATGCCGGAACCAGAAACCGGCGCCTTCCCCATTGTCGCTACCCACACAGGCTGCACTGACACCGTACGGTGCTTTAATAAAGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCgg                                                                                              <  2:45317/139‑1 (MQ=9)
                                                                           aTGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAGACAGCATCAGGTTCCtttagggaatg                                                                               >  7:933288/1‑138 (MQ=37)
                                                                                ggAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTTCAATTTAAGAGGATTTAATAAATTTTCTGCGGTTCGAGGATTCGAAGCTCGGACTGCCTGAATCAGCATCCTGATCATTAAAGCTTGGCGATAcac                                                                       >  3:1592836/1‑148 (MQ=16)
                                                                                     cAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGGAAGCGGCTTGAATAAAGTGTCTGGGGTACGAGGATTCGAACCTCGGAGTGCCGGTATCAGAATCCGGTGCCTTCCCGGGTGGTGAGACACcaaca                                                                  >  5:995851/1‑150 (MQ=25)
                                                                                      aGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCAGTTAAAAGGTAAGCGGCTTGTATAAATTGTCTGGGGTTCGAGGATTCGACGCGAGGAATGCCTGAGACACAATCCTGATCCGTGACGCTTGGCGATACCCcgacaa                                                                 >  5:1291583/1‑150 (MQ=19)
                                                                                        actCCGGTGCCTTACCGCTTGGCGATACCCCTACTCGGTGCACTAACAAGGAAACCCTCTTGAATAAAGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAAtt                                                              <  5:329949/149‑1 (MQ=21)
                                                                                               ggCCTTAGAGCTTGGCGCTACCCAAACTGGGTGCACTTACAAGGTAAGCTTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTg                                                       <  5:69541/150‑1 (MQ=21)
                                                                                                  cTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGACCCTAGGAATGCCGGACTCAGAATCCGGTGCCTTCCCGCTTGGGGATCCACCCACAAATTGCTTGTGAAt                                                    >  3:70286/1‑151 (MQ=25)
                                                                                                    tACCGCTTGGCGAAACCCCCACTCGCTGCACTCACCAGGTACGCCTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAAtt                                                   <  3:1312364/150‑1 (MQ=21)
                                                                                                     aCCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAAtttt                                                 >  7:267393/1‑150 (MQ=255)
                                                                                                      ccGCTTGTCGATACCCCAACTGGGTTCACTTACAAGGTAAGCCTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGc                                                <  1:629684/151‑1 (MQ=255)
                                                                                                      ccGCTTGGCGGTACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCATCAACAGGAGCCTTACGGCTTGGCGATACCCCAAGAAGTGGGGGTTGaaaatcc                                                >  2:878569/1‑146 (MQ=21)
                                                                                                      ccGCTTGGCGATACCCCAACTGGTTGCACTTACATGGTAATGTTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGc                                                                              <  8:521018/121‑1 (MQ=21)
                                                                                                       cGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCAACATCCGATGCGGTTCGTGTTGGCGATACCAGTAGAAAATGGTGTTGAAATTggg                                               >  7:676304/1‑149 (MQ=21)
                                                                                                        gCTTGCCTATACCCCAACTGGGTGCACTTACCACGTAAGCCTCTTTAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCg                                              <  5:66185/151‑1 (MQ=21)
                                                                                                            ggCGTTACCCATACTGGGTGCACTTACAAGGTATGGTTCTTTTTTAATTTGGCTGTGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAAc                                           <  7:546509/150‑1 (MQ=18)
                                                                                                            ggCGATACCCGAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAAAAAGCGGTGGCTTACCGCTGGGAGATACACGAACAATCTGCCTGTGAATCTGCCggcgt                                          >  6:1122108/1‑147 (MQ=21)
                                                                                                             gCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCATAAAAAGGTGCCTTACCGCTTGGCGATACCCCAATAAAATGGAGTTGaaaatagcgaaga                                          >  8:689887/1‑139 (MQ=21)
                                                                                                              cGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCcaataacagggc                                                           >  8:47843/1‑126 (MQ=255)
                                                                                                              cGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACata                                        <  3:522977/151‑1 (MQ=255)
                                                                                                              cGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACat                                         >  1:954935/1‑150 (MQ=255)
                                                                                                              cGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTAGAAATGAAGAAAGAAGAATACGGTAACTTACCACTTGTATATAGACCAAAAAATTGGGTGTGAAttataataaaaa                                         >  7:418176/1‑140 (MQ=255)
                                                                                                               gATACCCCAACTGGTTGCACTTACAAGGTAAGCGTCTTGAATAACTTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCcaataaccgggcggt                                                        <  3:1238237/134‑10 (MQ=18)
                                                                                                               gATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACatat                                       >  5:1280229/1‑151 (MQ=255)
                                                                                                                  aCCCCCACTGGGACCACCTACTAGGAAAGGTTCTTTTTTAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATAtt                                      <  5:487388/149‑1 (MQ=17)
                                                                                                                  aCCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTc                                     <  5:908388/150‑1 (MQ=255)
                                                                                                                  aCCCCAACTGGGTGCACTGACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTc                                     <  5:1173016/150‑1 (MQ=255)
                                                                                                                    cccAACTGGTTGCACTTACAATTTAAGGTTCTTGAATAATTTGGCTGGGGTACGAGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGAt                                                                           <  2:241254/110‑1 (MQ=14)
                                                                                                                     cccaCTGTGTGCACTTACAAGGGAAGCTTCTTGAATAACTTGGCTGGGGTACGAGGATTCGAACCAGGGAATGCCGGAATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCcatccgtacaa                                                            <  5:126805/121‑10 (MQ=14)
                                                                                                                       aaCTGTTTGCACTTACATCTTAAGCTTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGc                                                                              <  8:123619/104‑1 (MQ=14)
                                                                                                                       aaCTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATaaac                                                               >  1:465612/1‑118 (MQ=255)
                                                                                                                       aaCTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAAATGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCcaataacc                                                               <  5:465002/119‑3 (MQ=18)
                                                                                                                        aatgggaccACTTACTAGGTATGGTGCTTTTATAATTTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACAt                              <  8:1164725/143‑1 (MQ=18)
                                                                                                                        aCTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCAAAAACCGGTGCCt                                                                                         >  4:657031/1‑92 (MQ=255)
                                                                                                                           gggTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCaa                                                                                                     >  4:1038123/1‑76 (MQ=255)
                                                                                                                           gggTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCAGGGAATGCCGGTATCaa                                                                                                     <  3:1034803/77‑2 (MQ=25)
                                                                                                                                 ccTTACAAGGTACGCGTCTTTAATAAATTGGCTGGGGTACGAGGATGCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAAttt                     <  2:513532/150‑1 (MQ=255)
                                                                                                                                 aCTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCcaataaccggg                                                            <  6:1336018/112‑6 (MQ=17)
                                                                                                                                 aCTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCcaataaccggg                                                            >  7:1342611/1‑107 (MQ=255)
                                                                                                                                     aCAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTtggtg                 >  5:242818/1‑151 (MQ=255)
                                                                                                                                      ccccgtagcgagcTTTAATAAAGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTtg                    <  3:715741/135‑1 (MQ=18)
                                                                                                                                      cAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTtggtgg                >  3:1114473/1‑151 (MQ=255)
                                                                                                                                         ggtacgcagcTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTa             <  6:200434/142‑1 (MQ=255)
                                                                                                                                         cgaaaccttCTTTATTAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTa             <  2:267876/143‑1 (MQ=255)
                                                                                                                                         cgTAAGGGTCTTTATTAAAGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTa             <  6:1523017/150‑1 (MQ=255)
                                                                                                                                          gTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTac            >  4:3112/1‑151 (MQ=255)
                                                                                                                                            aaGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGTATCAGAATCCGGGGGCTTACCGCTTGGCGATACGCCAAGAACATGGAGTTGACTGGGAGGCACGTATTAGATGGATTCAGAATGtggtggggccgc          >  5:483628/1‑145 (MQ=9)
                                                                                                                                             aGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCACGGAATGCCAGATACAAAGACCGGAGAGTTACCGAATAGGGATACCAAAACAAATTGTATATGAATTTGCCGAAAAAATTATATAAATTCAGAAGTTGGTGGCTgcggg         >  1:787858/1‑149 (MQ=255)
                                                                                                                                                     gAATAAATTGGATGTGGTACTAGGAATCTAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTc  <  4:1340431/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTC  >  NC_000913/696385‑696683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑