Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,8800CA25.1% 251.4 / 22.6 178A654A (GCC→GCA) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (105/26);  new base A (43/1);  total (149/29)
Fisher's exact test for biased strand distribution p-value = 3.35e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 192 total aligned reads displayed.

AACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT  >  NC_000913/1708735‑1709030
                                                                                                                                                 |                                                                                                                                                      
aaCAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCCCGAAAGCTGGAACAGCAACAGGCTCATGCCGACCCAGAACAACATGTCGATCCGCGCAAAGCCGCCGTCg                                                                                                                                                    >  6:618014/1‑150 (MQ=11)
 aCAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTCGCCGCCGCTATTGCCCGAGCAAAAGCCAGAAACCACGCACAGCAACAGGATAATCCCGAGCAAGAACAACAGGGTGATCCGCGCAAAGCGGCAGTGGa                                                                                                                                                   >  1:669268/1‑150 (MQ=9)
   aGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATAGCCCAAGCCAAACCACGAAAGCAGGAAAAGCAACAGTATAATACCGAGCCAGAAGAACAGGATGATAAAAGCAAAGCCGCAGTCGAAGc                                                                                                                                                >  4:258098/1‑151 (MQ=2)
    ggataatcacgAACCAGCACAAGATGGCGATCCTCGAAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGcc                                                                                                                                               <  2:1584163/141‑1 (MQ=11)
     gCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGCGCAAAAGCAATAAAACACGAACAGCAAAAGGATAATGCCGACACAGAACAACAGCTTCATCCTCGCAAAGCGTCAGTCGacgagg                                                                                                                                              >  8:83235/1‑146 (MQ=255)
       tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACGGAAGCTCGCTCGGCTCAAAGCCCCGGTccttcaggc                                                                                                                                             >  5:37073/1‑142 (MQ=11)
       tAATGCGGAACCAGAAGAACAGGTCGATACGCGCAAAGCCGCCCTCGAAGCCGCTATTGCACGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAAGACCAGGTGGATCGGGGGGAAGcggccggggctgccggg                                                                                                                                            >  3:1278688/1‑140 (MQ=11)
             ggAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCCGCGGCTATTGcc                                                                                                                                      >  6:926610/1‑151 (MQ=14)
             ggAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGAGCGAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCCGTCCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGcc                                                                                                                                      >  2:358100/1‑151 (MQ=14)
               aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCGAAAGCACGCAAGCGGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGCTAAGCGCAAAGCCCCAGTTGCAGCGGCTATTGcccc                                                                                                                                    >  2:986972/1‑150 (MQ=14)
                aCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCAGGAACAGCAACAGGCTAATCCAGATCCAGAACAACAGGTAGATCCGCGCAAAGCCTCAGTCGAAGCCGCTATTGCACg                                                                                                                                    >  4:1605377/1‑150 (MQ=11)
                 ccAGAACCACATGCCGATCCTCGTAAACCCGCCGTCGAATCCTCTATAGCCCGAGCCAAATCACGCAATCTGGAACAGCAACAGGATAATGACGACCCAGAACAACAGGGCGATCCGCGCAAATCCGCCGTCGAAGCCGCTATTGCCCGAg                                                                                                                                  <  1:48837/151‑1 (MQ=11)
                  cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAACGCCCGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGACGCGGCTATTGCCCgcgc                                                                                                                                 >  3:1247157/1‑151 (MQ=14)
                  cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGc                                                                                                                                 >  2:456262/1‑151 (MQ=255)
                   agaagaACAGGTCGATCCGCGCAAAGCCGCCGTGGCAGCGGCTATTGCCCGAGCGAACGCCAGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACCCCAGGTCGCTCCGCGCAAAGCCGCCGGCGAAGCCGCTATTGCCCGCGcc                                                                                                                                >  2:1105826/1‑151 (MQ=14)
                       gaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCAGGAACAGCAACAGGCTAATACCGAGCCAGAAAAACAGGTACATCCGCGCAAAGCGGCAGTAGACGCCGCTATTgacagcgcaaaac                                                                                                                            >  1:183116/1‑139 (MQ=11)
                          gatggtgaggggcgtAAAGACGGGGTCGAAGCAGCTATTCCCCGGCCCCAACCAGGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAAGAGGCCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgc                                                                                                                         <  5:1245020/140‑1 (MQ=14)
                               cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGAGAGCGGATGATCCCGCGGCAGAACTCCAGGGAGATGCGCCAAAAGCGGCCGGCGAAGCCGGGATTGAAAGAGCCACAgcgcggcgg                                                                                                                    >  5:586643/1‑147 (MQ=2)
                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGCCTATTGCCCGCGCCCATGCGCCCAAAc                                                                                                                   >  2:1454632/1‑151 (MQ=14)
                                 aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAACCCGCTATTGCCCGAGCCAACGCCCCCAAAcc                                                                                                                  >  5:1228318/1‑150 (MQ=255)
                                 aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCAGAGctcacgccaaaaaacc                                                                                                                  >  8:303576/1‑136 (MQ=11)
                                     gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCTGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGa                                                                                                               >  5:636967/1‑150 (MQ=255)
                                      cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAgccaaaaaacccgaac                                                                                                             >  7:1514468/1‑137 (MQ=14)
                                       gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGCGCAAAAGCGCGCAAACgcgcac                                                                                                             >  2:1040758/1‑145 (MQ=14)
                                       gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAAc                                                                                                             >  5:45427/1‑150 (MQ=255)
                                           aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCCAGAAAACCCGAACAGCac                                                                                                        >  6:655169/1‑150 (MQ=14)
                                            gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCGAGCTGGACCAGCAACCTCCTAAGGCCCAGCCACAACAACAGGTGGCTCCGCGCAAAGCTGCCGTCGAAGACGATATTGCCCGCGCCAACGCGCGCCAGCGGGagccgcccc                                                                                                       >  6:86398/1‑143 (MQ=9)
                                                ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCACGAGCAAAAGCACGAAAACGCGAACAGCAACCAGc                                                                                                   >  8:490822/1‑151 (MQ=14)
                                                ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCACCCGGc                                                                                                   >  3:653101/1‑151 (MQ=255)
                                                 cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGAAAACGCGACCAGCAACCGGCt                                                                                                  >  2:1275697/1‑151 (MQ=255)
                                                    cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCCACGCCAGCAAACGGGACCAGCACCAGGCTatt                                                                                               >  6:1479536/1‑149 (MQ=14)
                                                     gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGCGCCAACGCCCGCAAACGGGACCAGCACCCGGCTCAtc                                                                                              >  5:129246/1‑150 (MQ=14)
                                                      aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCCAGAAAACGCGACCAGCAAcatcggaatcg                                                                                             >  8:144864/1‑141 (MQ=14)
                                                        gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCGAAAGCCCCAAAACGGGACCAGCACCCCGCGAATGCgg                                                                                           >  6:478835/1‑151 (MQ=14)
                                                         ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCCGCGGCTATTGCCCGCGCCAAGGCCCCCAAACGCGCCCAGCACCCGGCTCATGCggg                                                                                          >  3:386415/1‑150 (MQ=14)
                                                           gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCAAAAGCCAAAAAAAGGGAACAGCACCCGGCTAATGCGGaac                                                                                        >  4:1349231/1‑149 (MQ=14)
                                                           gCTATTGCCCGTGCCAAACGACGCTAGCTGGAACAGCAACAGGCTAATGCGGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCTAAGCCGCTATTGCCCGAGCCAAAGCTCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc                                                                                        <  4:794291/151‑1 (MQ=14)
                                                             tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCCACGCGCGCAAACGGGACCAGCACCCGGCTAATGCGGAGcc                                                                                       >  5:338424/1‑150 (MQ=17)
                                                                tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCCGCGGCTATTGCCCGCGCCCACGCGAGCAAACGCGCCCAGCACCAGGGTCAAGCGGAGCCaga                                                                                    >  3:935079/1‑150 (MQ=14)
                                                                tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCAGCGAAGAGCCGCCGTCGCAGCGGCTATTGCACGCGGCAAAGCGCGCACCCGGGAACTGCATCAGGCTAATGCGGGGcccgcg                                                                                   >  5:1324285/1‑147 (MQ=14)
                                                                   ccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGACGCCGCTATTGCCCGCGCAAAAGCCCACAAACGCGAACAGCACCAGGGTAATCCGGAGCCctaagac                                                                                >  8:1346707/1‑150 (MQ=14)
                                                                    cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCCACGCCCGCAAACGGGCCCAGCAGCAGGCTCATCCGGAGCCagaagacc                                                                               >  6:31144/1‑149 (MQ=14)
                                                                        ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGt                                                                           >  5:1166069/1‑151 (MQ=255)
                                                                         cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGACCAGCACCAGGCTAATGCGGAGCCAGAAGACCAGGtt                                                                          >  3:1022279/1‑151 (MQ=14)
                                                                          aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGCGCCAAGGCGCGCAAACGCGACCAGCACCAGGGTCATGACGAGGCAGAACAACACGttc                                                                         >  2:544401/1‑150 (MQ=14)
                                                                            aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAAAAAACACGAACAGCATCAGGATAAAACCGAGCAagaaaaccaattaaa                                                                        >  7:1163491/1‑139 (MQ=2)
                                                                             gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCAAAAGCCAAAAAACCCGCCCAGCAGAAGGATAAAACCGAGCCAGAAGAACAggagaaac                                                                      >  8:1266763/1‑145 (MQ=9)
                                                                                  cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGAAGCCGCTATTGCCCGAGCCCAAGCCCGCAAACGGGACCAGCAGCAGGCTCATGAGGAGCCCGAAGACGAGGTAGCTCCgcgc                                                                 >  5:802206/1‑151 (MQ=14)
                                                                                     gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCGCAGGCCCCCAAACCCGCCCAGCAGCAGGCTAAAGCCGAGCCAGAAGACCAGGttcctcagcggacc                                                              >  4:422019/1‑139 (MQ=2)
                                                                                     gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCaa                                                               >  5:1230894/1‑150 (MQ=255)
                                                                                       tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGCCGCGGCTATTGCCCGCGCCAAAGCCAGCAAACGCGAACAGCACCAGGCTAATGCGGAACCAGAAGAAAAGGTTGATCAGCGCaa                                                               >  1:1191703/1‑148 (MQ=11)
                                                                                       tGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCGAGCGAAAGCGCGAAAACCGGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGCACCCCGCACAGc                                                            >  5:1266692/1‑151 (MQ=14)
                                                                                         taaCAGCAACAGTCTAATGCTGAACGAGTATAATACGTTGATCCTCGTAAATCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAATCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCt                                                           <  1:889165/149‑1 (MQ=14)
                                                                                         gAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCACACGCCAGCAAACCCGACCAGCAACAGGCTAAAAAGGAGCCATAAGAACAAGTTGaacagccaacagcgc                                                          >  1:945515/1‑137 (MQ=9)
                                                                                          aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCGAAAGCCCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGCAGAGGTTGATCAGCGCACAGCTGc                                                         >  6:1335858/1‑151 (MQ=14)
                                                                                          aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAGCAAACGGAAACAGCAACAGCCTAATGCGGAGCCAGAAGAACAGCTTGATCCGCGCAAAGCTGc                                                         >  7:1320387/1‑151 (MQ=14)
                                                                                            cAGCAACAGGATAATTTTTATCCAGAACAACAGGTCGATACGATCAAAGCCGCCTTCGAAGTTGCTATTGCCGTAGCTAAAGCGATCAATCTGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCg                                                       <  1:612763/151‑1 (MQ=2)
                                                                                             aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAAAGCGCGAAAACGGGAACAGCAACCGGCTAATCCCGAGCCAGAACACCAGGTTGCTCAGCGCAACGCTGCGGt                                                      >  5:137400/1‑151 (MQ=255)
                                                                                               cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCAAGCGAGCAAACGGGAACAGCACCAGGCTAATGCGGAGGCAGAAGAACAGGTTGATCCGCGCAACGCTGCAGTCg                                                    >  5:658902/1‑151 (MQ=14)
                                                                                               aaagatgaaaaTCCCGACGCAGAAAAAGATGCCGATCCACGCAAACCCGCCGTAGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCg                                                    <  6:1310485/142‑1 (MQ=17)
                                                                                                   aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGtagccgc                                                >  2:774153/1‑145 (MQ=255)
                                                                                                       tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCTGCCGTACCAGCGGCt                                            >  4:1247985/1‑151 (MQ=255)
                                                                                                          tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCTCGCAAACGCCAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGAAGCCGCTAtt                                         >  1:738533/1‑151 (MQ=14)
                                                                                                           gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGCTATTg                                        >  1:1294988/1‑151 (MQ=255)
                                                                                                            ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCGGCAGTAGACGCGGCTATTGc                                       >  7:574305/1‑151 (MQ=14)
                                                                                                             cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGAAGCGGCTATTGCCCGCGCAAAAGCGAGAAAAGCGGAACAGCAACAGGGTAATGAGGTCCGAGAAGAGGAGGGTGATCCGAGCAAAGCTGCAGTAGAGGCGGCTATTGcc                                      >  7:852299/1‑150 (MQ=9)
                                                                                                              gAGCCAGAACAGCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc                                     >  6:1540644/1‑151 (MQ=255)
                                                                                                              gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGAGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGACGCGGCTATTGCAc                                     >  4:645577/1‑151 (MQ=255)
                                                                                                                gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGGGCCAGAAGAACAGGTTGATCCGCGCAACGCGGCCGTCGAAGCGGCTATTGCAcgc                                   >  6:119722/1‑151 (MQ=255)
                                                                                                                accAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACAGGAACAGCAACAGGCTAATGAGGTACCAGAAGAACAGGTGGATCCGCGCAAAGCGGCAGTTGACGCGGCTATTGCAcgc                                   >  1:1533146/2‑151 (MQ=11)
                                                                                                                 ccccaacacgacgccGATCCGAGCTAAGCCGCCGTCGAAGCCGCTATTTCCCGTGACAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGATCCAGAAGAAGAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg                                  <  1:399032/137‑1 (MQ=11)
                                                                                                                  cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAAACATCTAATGAGCCTCCAGAAGCGCAAGAGGCTACGCGAAAAGCTGCCGAAGACGCGGcgaatgaacc                                    >  7:727559/1‑139 (MQ=2)
                                                                                                                   aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGCAGCGGCTATTGCACgcgc                                 >  7:909301/1‑150 (MQ=17)
                                                                                                                    gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCTCAAACCGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGTACATCCGCGAAAAGCTGCCGTCGAAGCGGCTATTGCACGCGcc                                >  7:269708/1‑150 (MQ=17)
                                                                                                                     cccaacaGGGCCAGCCGCGCAAAGCCGCCCTCGAAGCCGCTCGTCCCCGAGCCAACTCCCTCATACTGGATCTGCTACGGGCTAATGCGGAGGCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaa                              <  2:853574/149‑1 (MQ=9)
                                                                                                                     aacaacAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGACATAGCAAAAGCGACCAATAGGGAAAATCAAAAGGCTAATGAGGAGCAAGAAGAACAGGTCGATACGATAAAAAAATACGTCGAAGCGGCTATTGcgagcgga                                >  8:65578/1‑142 (MQ=2)
                                                                                                                      acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCACgcgcgc                               >  4:1011829/1‑147 (MQ=255)
                                                                                                                      acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaac                             >  3:460173/1‑150 (MQ=255)
                                                                                                                       ccaccgcctgccgcgcgCAACGCCGCCGTCGAAGGCTCTATTTCCCGTGCCAAAGCGCTCAAACTGGAACAGTAACCGGCTAATTCTGAGCCAGAAGAACTGTTTTAGGCTCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAg                            <  4:555109/138‑1 (MQ=255)
                                                                                                                       caaccGGTCGATCCGCGCAAATCTTCATTCTAAGCCGCTATTGCCCGAGCAAAAGAAAGCAATAGTGTATTGCAACAGTCTAATGTCTTCCGAGATCAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAg                            <  8:545021/151‑1 (MQ=2)
                                                                                                                        aacaGGTCGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCGAGCCCACGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCGATTGCCCGCGCCAAGGc                           >  4:903752/1‑151 (MQ=17)
                                                                                                                        aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCCCGCGCCAACGc                           >  3:1441314/1‑151 (MQ=255)
                                                                                                                         ccaGGCCGATCCACGGAAACCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCa                          <  5:23401/150‑1 (MQ=14)
                                                                                                                         acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGCCCGCTCCAAAGc                           >  8:45239/1‑150 (MQ=14)
                                                                                                                             gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGCACGCGCCAaagcaagc                       >  4:992984/1‑150 (MQ=17)
                                                                                                                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCAGCGGCTATTGCACGCGCGAACGCACGCAAGc                   >  3:903832/1‑151 (MQ=255)
                                                                                                                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc                   >  3:804136/1‑151 (MQ=255)
                                                                                                                                gATCCGCGCAAAGCCGCCGACGAAGCCGCTATTGACCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCCAACCACACaacc                   >  8:1241156/1‑149 (MQ=18)
                                                                                                                                 aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAAGGCAAGAAAGcc                  >  4:1366538/1‑150 (MQ=14)
                                                                                                                                   ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCAcaaaaacacg                >  1:1343008/1‑142 (MQ=17)
                                                                                                                                       gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTGGAAGCGGCTATTGCACGCGCCAAAGCACCCAACCtcgccc             >  6:1024942/1‑145 (MQ=17)
                                                                                                                                       ccAAACCCGCCGGCGAAGCCGCTATTGCCATATCCAAAGCGCTCAAGCGCTAACAGCAACCTGATATTGAGTAGACAGAATACCATGCTGATCCGATCAAACCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa            <  2:1380743/150‑1 (MQ=9)
                                                                                                                                        cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACACCACCCGGCTAATGGCGCCCCAGAAGAACAGGTAGATCCGCGGAAAGCGGCAGTCGAAGCCGCTATTGCCCGCGCCACAgcgcgcggccgcgccc             >  3:552781/1‑139 (MQ=11)
                                                                                                                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCCGCAAGCTGGAACAGc          >  7:603812/1‑151 (MQ=255)
                                                                                                                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGACCAGc          >  2:1221704/1‑151 (MQ=255)
                                                                                                                                            gccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACgg                                                                                                                 <  6:869161/45‑1 (MQ=255)
                                                                                                                                               gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCAACAgg    >  1:112901/1‑151 (MQ=255)
                                                                                                                                               gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAGGCCCGCAAGCGGGAACAGCAGCAgg    >  7:1456449/1‑151 (MQ=255)
                                                                                                                                               gccgTCGAAGCCGCTATTGCCAGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACCCAAGCGGGAACAGCACCAgg    >  7:837347/1‑151 (MQ=255)
                                                                                                                                                 cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTACTGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCGAAAGCAAGCAACCGCGACCAGCACCAGGCt  >  7:657976/1‑151 (MQ=17)
                                                                                                                                                 |                                                                                                                                                      
AACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT  >  NC_000913/1708735‑1709030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑