Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,552,1910CA28.0% 783.5 / 95.4 417intergenic (+200/+207)fdnI/yddMformate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (94/191);  new base A (84/27);  total (197/220)
Fisher's exact test for biased strand distribution p-value = 1.24e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 423 total aligned reads displayed.

CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAT  >  NC_000913/1552041‑1552340
                                                                                                                                                      |                                                                                                                                                     
 atatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa                                                                                                                                                      <  6:606896/151‑1 (MQ=31)
    ttGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAAt                                                                                                                                                   >  5:1060325/1‑151 (MQ=14)
      gTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATg                                                                                                                                                  <  8:188714/150‑1 (MQ=33)
      gTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGAGATTGTAATCAGTTTCAAATgg                                                                                                                                                 >  3:1431409/1‑151 (MQ=16)
       tAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGgc                                                                                                                                                >  6:1252352/1‑151 (MQ=14)
             acctAGGCTGTGTGCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTa                                                                                                                                          <  1:269704/148‑1 (MQ=255)
               gTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa                                                                                                                                        <  8:436982/151‑1 (MQ=37)
               gTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa                                                                                                                                        <  8:1165289/151‑1 (MQ=37)
               gTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa                                                                                                                                         >  5:633880/1‑150 (MQ=37)
                 aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg                                                                                                                                      <  2:893137/151‑1 (MQ=39)
                 aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg                                                                                                                                      <  5:43195/151‑1 (MQ=39)
                  ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATTGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATGAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAgg                                                                                                                                     <  8:514946/151‑1 (MQ=255)
                  ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAgg                                                                                                                                     <  4:35649/151‑1 (MQ=39)
                   gCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTaaaatg                                                                                                                                     >  7:424402/1‑148 (MQ=16)
                     tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCGGTACAGGGCgg                                                                                                                                  >  6:565797/1‑150 (MQ=255)
                       tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGCACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc                                                                                                                                 >  4:1122372/1‑150 (MQ=255)
                       tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc                                                                                                                                 <  2:1135988/150‑1 (MQ=255)
                        gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTTCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAACGCGTCAt                                                                                                                               >  1:19973/1‑151 (MQ=255)
                        gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTTAGTGGCGTc                                                                                                                                 >  8:371925/1‑149 (MQ=255)
                           cATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCCATAGATTGCAGTGAACGTGTAGGCCTGATATGGGTAGCGCATCAGGCAATGTTGCGTGTGTCTTCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt                                                                                                                            <  7:762636/151‑1 (MQ=255)
                              gCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGGAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCat                                                                                                                         <  1:973944/151‑1 (MQ=255)
                               ccGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCata                                                                                                                        <  4:627764/151‑1 (MQ=255)
                                cGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGAGAAGGGTAGCGCAGCAGGCTGTGGTGCGTTGGGGATGTGTTTGAAATGGGGGGGTAATCGGCGTGATTTTCatat                                                                                                                       >  5:538017/1‑151 (MQ=11)
                                 ggATGCTGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGTCCTGATAATCGTAGCGCATCAGGCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATAtt                                                                                                                      <  6:774791/151‑1 (MQ=255)
                                 ggATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATAtt                                                                                                                      <  5:90969/151‑1 (MQ=255)
                                   aTGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGt                                                                                                                    <  5:782647/151‑1 (MQ=255)
                                     gcggcgTTATCGCCTTATCCTGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTa                                                                                                                   <  1:122015/150‑1 (MQ=255)
                                       ggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAAAGAGTCATTTTAATATTGTata                                                                                                                 >  1:833900/1‑148 (MQ=11)
                                          gTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTATTATTGTAGAAAAc                                                                                                             >  8:498379/1‑151 (MQ=255)
                                             aaCGCCTTATCCTGCATGAAAACCCTTCTAATCCAATATATTGCACTGAACGTCTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTa                                                                                                          <  4:24614/151‑1 (MQ=18)
                                              actccTTATACTTCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAg                                                                                                         <  7:1850/148‑1 (MQ=255)
                                              aCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAg                                                                                                         <  2:569462/151‑1 (MQ=255)
                                                gCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGc                                                                                                       <  8:745939/151‑1 (MQ=255)
                                                  cTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTTTAAAAAGAGTCATTTTAATATTGAATACAAAGAAGGCtt                                                                                                     >  7:882159/1‑151 (MQ=11)
                                                   ttATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAAAGTAGGCttt                                                                                                    >  1:609811/1‑151 (MQ=255)
                                                   ttATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGAGTTTGTCATCAGTTAAAAATGGCGCTGTAAAATGGGACATTTTAATATTGAATACACCGAAGGcgt                                                                                                     >  8:58365/1‑148 (MQ=11)
                                                    tATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCttt                                                                                                    <  2:221454/150‑1 (MQ=255)
                                                    tATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGACTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCttt                                                                                                    <  4:492224/150‑1 (MQ=255)
                                                         gtcATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCATGCAATGTTGATTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt                                                                                              <  1:419560/149‑1 (MQ=255)
                                                         ggCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTATGCCTGATAAGCGTAGCTCATCATTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt                                                                                              <  6:95367/151‑1 (MQ=255)
                                                         ggCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt                                                                                              <  6:1164802/151‑1 (MQ=255)
                                                            aTGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGcc                                                                                           <  6:1044732/151‑1 (MQ=255)
                                                            aTGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGGGTCATTTTGTTATTGTATACCACGAAGGCTTTGTTCATGcc                                                                                           >  5:854381/1‑151 (MQ=17)
                                                              gAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg                                                                                         <  6:214786/151‑1 (MQ=255)
                                                                  acgcTTCAAATCCAATAGATTGCAGTGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgc                                                                                     <  4:989794/148‑1 (MQ=255)
                                                                     cTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAAGGCGTCATTTTAATATTGTATACAAAGTAGGCTTTGTTCATGcagcatcccgg                                                                                  >  2:1461731/1‑141 (MQ=17)
                                                                       tCAAATCCAATAGATTGGAGTGAACGTGTAGTAATGATAAGCGTATCTAATGAGTCAATGTTTCTTTTTTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggc                                                                                  <  4:1165147/149‑1 (MQ=18)
                                                                       tCAAATCCAATAGATTGCAGTGAACTTGTATTCCTGATTAGCTTAGGTGATGATTTAATGTTTTTTTTTTTTTCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggc                                                                                  <  1:1435568/149‑1 (MQ=17)
                                                                        cacaTCCATTAGATTGCTGTGAACGTGTAGTCCTGAGACGCGTAGCCCATGAGTCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGt                                                                                <  3:1014958/147‑1 (MQ=21)
                                                                        cAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGt                                                                                <  3:971413/150‑1 (MQ=255)
                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTTAAATGGCGCTGTATAAGGCGTCATTTTCATATTGTAGACAAAGTAGGCTTTGTTAATGCCGGATTCGGCGTGAAc                                                                            >  8:246283/1‑151 (MQ=255)
                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAc                                                                            <  4:1487541/151‑1 (MQ=255)
                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATAGATCTGAAAAAGGACTAATTTTCATATTGTATACAAATTAGTCTTTGTTAATGAAGTATgcggatagaa                                                                             >  3:1313899/1‑144 (MQ=14)
                                                                           aTCCAATAGATTGCAGAGCACGTGTAGGCCTGATAAGCGGAGCGCATCAGGCAATGTTGAGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGaan                                                                            <  7:62258/151‑2 (MQ=255)
                                                                            tCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACg                                                                           >  7:241146/1‑151 (MQ=255)
                                                                             ccAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTTTAAAAAGAGACATTTTAATATTGTATAAAAAGAAGGCTTTATACATAACGGAAgaggctagaaaac                                                                          >  7:1391779/1‑143 (MQ=2)
                                                                               aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCt                                                                        <  6:876742/151‑1 (MQ=255)
                                                                                aTAGATTGCAGTGTACGTGTAGTAATGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCtt                                                                       <  1:573960/151‑1 (MQ=255)
                                                                                aTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCtt                                                                       <  4:1322352/151‑1 (MQ=255)
                                                                                  aGATTGCAGTGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAt                                                                     <  7:389717/151‑1 (MQ=255)
                                                                                  aGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTa                                                                      <  5:1305214/150‑1 (MQ=255)
                                                                                    aTTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGGCGCTGTAATAGGGGACGTTGTCAGGTTGGAGAGCACGTAGCCTTTGTGGATGCCGGATGCGGCGTTCACGGGTTATc                                                                    >  8:1262320/1‑150 (MQ=17)
                                                                                    aTTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATcc                                                                   <  2:1387066/151‑1 (MQ=255)
                                                                                       gCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                <  8:879579/151‑1 (MQ=255)
                                                                                       gCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAAGCGTCATTTTAATATTGTAGACAACGTAGGCTTAGTACATGCCCAATGCCTCGTGaaatcatgataaggc                                                                >  3:1400807/1‑138 (MQ=18)
                                                                                        cAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAACGCGTCATTTTCATATTGAATACAAAGTAGGCTTTCTTCATGCAGGAGCAGGCGTGaaacacaaaaacccc                                                                >  3:351616/1‑137 (MQ=18)
                                                                                        cAGTGAACGTGTAGGCCTGATAAGCGGAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCa                                                               <  2:456458/151‑1 (MQ=255)
                                                                                         aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCTTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAt                                                              <  1:474554/151‑1 (MQ=255)
                                                                                           tGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACACAGTAGGCTTTGTTCATGCCGGAAGCCGCGTGAAACCCGTATCCGCCaac                                                             >  4:1413142/1‑148 (MQ=25)
                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGaa                                                           <  3:617088/151‑1 (MQ=255)
                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGAAGGCTTTGTTCATGCCGGATGCGGCGTGAAAGCCTTATCCCGCAtca                                                            >  1:771468/1‑148 (MQ=255)
                                                                                               cGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAc                                                        <  8:811835/151‑1 (MQ=255)
                                                                                               cGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGGTCCGTTTGTCATCAGCTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAc                                                        <  8:1443431/151‑1 (MQ=255)
                                                                                                gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAcc                                                       >  8:1024139/1‑151 (MQ=255)
                                                                                                gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAAGGAGTCATTTTAATATTGTATACAAAGTAGGCTTTGTTCATCCCCGATGCGGCGTGAACGCGTTATCCGGCATGAAAAcc                                                       >  3:218305/1‑151 (MQ=25)
                                                                                                  gtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTTGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAAGAAAACCCt                                                     >  6:1417748/1‑151 (MQ=255)
                                                                                                    aGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTc                                                   <  2:316084/151‑1 (MQ=255)
                                                                                                     ggCCTGATAAGCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTc                                                   <  4:582199/150‑1 (MQ=255)
                                                                                                         tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCCGATGCGGCGTGAAGGCCTATAGCGGCATGAACACCCGTCAATTc                                              >  5:276672/1‑151 (MQ=18)
                                                                                                           aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACCCCTTAGACGGCATGAAAACCCTTCAAATcc                                             >  5:1132917/1‑150 (MQ=255)
                                                                                                             aaGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGGCTTATCCGGCATGAAAACCCTTCAAATACAAt                                          >  2:1293628/1‑151 (MQ=255)
                                                                                                              aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGAATGACAACCCTTCAAATCCAAt                                          >  7:1245613/1‑150 (MQ=255)
                                                                                                                cGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTATTATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCTTGAAAGACATAAACCCCATGAAAAACCTTCAAATCCAAt                                          >  1:1069000/1‑148 (MQ=18)
                                                                                                                   aGCTCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt                                     <  1:1021723/150‑1 (MQ=255)
                                                                                                                   aGCGCATCAGGCAATGTTGCTTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTg                                    <  3:481752/151‑1 (MQ=255)
                                                                                                                   aGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTg                                    <  5:125657/151‑1 (MQ=255)
                                                                                                                   aGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTg                                    <  7:452389/151‑1 (MQ=255)
                                                                                                                     agcatatgtcAATGTTGAGTTTGTCATAAGTTTCAAATGGGGCTGTTAAATCCGTCATTTTCTTATTGTATATAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACTCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCa                                  <  6:511469/142‑1 (MQ=14)
                                                                                                                      gcATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGCCGCATGAGGCGTGAAAGACGTAACCGGAAAGAAAACCCTTCAAAAACAATaccgtccat                                 >  4:756778/1‑143 (MQ=17)
                                                                                                                       cATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGTAGAAAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAAGACTTATACGGAATGAAAACCCTTAAAATCCAATAGAATGCAGt                                >  3:278763/1‑151 (MQ=18)
                                                                                                                        aTCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGAAGACAACGTAGGCTTTGTTCATGCCGGATGAGTCGTTAAAGACTAAAACCCAATGACAACCCTTAAACTACAATACAATGCAGtt                               >  7:128536/1‑150 (MQ=12)
                                                                                                                        aTCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGCGACATTTTCATATTGAAGACAACGTAGGCTTAGTACATGCCCGATCCGGCGTGAACCACATAAACCCCATCAAAACCCTTCAAAAACAATAAATTCCAGTg                               >  1:1325823/1‑151 (MQ=19)
                                                                                                                               aaTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtgt                        >  1:663746/1‑151 (MQ=255)
                                                                                                                                aTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAccc                                                      <  3:1167394/120‑1 (MQ=255)
                                                                                                                                      ttttttTCATGAGTTTCTTATGTTGTTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCt                  <  1:382844/148‑1 (MQ=11)
                                                                                                                                       gTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTg                 >  6:328575/1‑150 (MQ=255)
                                                                                                                                        tttGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGAt               >  6:1315073/1‑151 (MQ=255)
                                                                                                                                         ttctctttaGTTTAAAATGGAGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGAt               <  8:311708/142‑1 (MQ=255)
                                                                                                                                                caGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt         >  7:1129193/1‑149 (MQ=37)
                                                                                                                                                   tttCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcgc    >  2:79376/1‑151 (MQ=34)
                                                                                                                                                      |                                                                                                                                                     
CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAT  >  NC_000913/1552041‑1552340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑