Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC33.0% 194.8 / 66.4 200R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (96/32);  new base C (55/8);  total (154/46)
Fisher's exact test for biased strand distribution p-value = 5.89e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 202 total aligned reads displayed.

CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708753‑1709049
                                                                                                                                                    |                                                                                                                                                      
cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCAAGCAAGCGGGACCAGCAACAGGGTCATGCCGAGCCCGAACACCAGGTCGCTACGAGCAAAGACGCCGTCGCCGCGGCTATTGCCCGAGc                                                                                                                                                      >  8:259044/1‑151 (MQ=14)
 agaaacccatgcggATCCGCGGAAAACAGCCGTGGAAGCCGCTATTCCCCGGGACAAAGCACGCAACCTGGAACACCAACAGCCTAATCCCGACCCAGAACAACAGGGCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGcc                                                                                                                                                     <  6:1090158/138‑1 (MQ=14)
  gaaacccttggggATCCCCGAAAACCTGCCGTAGAAGCAGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCa                                                                                                                                                    <  6:347923/139‑1 (MQ=11)
    acaaCATGGCGATCCCCGCAAAACTGCCGTTGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTTGAAGCCGCTATTGCCCGAGCCaaa                                                                                                                                                  <  2:658547/149‑1 (MQ=11)
    aacccagccggATCCACGCAAACCAGCCGTTGAAGCCGGTATTGCCCGCGCCAACGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGGCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa                                                                                                                                                  <  5:1060798/141‑1 (MQ=11)
            tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAACCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCAGTAGACGCGGCTATTGACCGCGCAAACgccagaa                                                                                                                                           >  1:894171/1‑145 (MQ=14)
                 ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACggg                                                                                                                                   >  2:571627/1‑151 (MQ=255)
                      cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCGAGAtcgcgacagcgtcgaca                                                                                                                                 >  1:130612/1‑138 (MQ=14)
                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTGGACGCGGCTATTGCCCGCGCGCACGCCCGAAA‑‑ACgcgcccagc                                                                                                                             >  2:729585/1‑143 (MQ=14)
                         aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAA‑‑CCGCGAACAGCa                                                                                                                            >  2:1321730/1‑150 (MQ=255)
                           ccgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCCAACAA‑‑ACACGAACAGCaga                                                                                                                          >  7:1354979/1‑148 (MQ=14)
                           ccgcccgcGCAGCCGCTCTTGCCCGTGCCAAAGCTCGCATGCTGTATCAGCAACAGCCTAATGCCTACCCAGAAGAACAGGTCGATCCTATCAAACCAGGAGTCGAAGCCGATATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAAcc                                                                                                                         <  4:268102/151‑1 (MQ=255)
                               cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGCGCGCACGCCCGCAA‑‑CCgggcagcgcaagaggc                                                                                                                      >  6:1224432/1‑137 (MQ=11)
                                gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCGCACGCGCGCAA‑‑CCGGGACCAGCACCAGGCt                                                                                                                     >  6:684395/1‑150 (MQ=14)
                                gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTa                                                                                                                    <  2:1078435/151‑1 (MQ=255)
                                gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCCAACGCCCACAA‑‑ACGCGCCCAGCaaaaggat                                                                                                                     >  1:474348/1‑144 (MQ=14)
                                 tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGCCGCGGCTATTGCCCGCGCGAAAGCCAGCAA‑‑AGGCGACCAGCagcagggta                                                                                                                    >  7:772561/1‑142 (MQ=11)
                                 tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCCGCCGCTATTGCCCGAGCACAAGCCAGCAA‑‑ACCCGAACAGCaaaaggata                                                                                                                    >  1:928948/1‑143 (MQ=14)
                                  cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCGGCTATAGAACGCAACAGAGACCTCTA‑‑GCGGAAACAGCAACCGGATAAt                                                                                                                  >  3:570231/1‑151 (MQ=2)
                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCCACGCGCGCAA‑‑ACGGGAACAGCACCCGGCTAATg                                                                                                                 >  2:297235/1‑151 (MQ=255)
                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCGAAAGCCACCAA‑‑ACGGGACCAGCagaaggataatg                                                                                                                 >  3:433508/1‑140 (MQ=14)
                                    aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCGAACGCGCGCAA‑‑ACGGGACCAGCACCCGGCTCATGc                                                                                                                >  8:397715/1‑151 (MQ=17)
                                     aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGCGAACAGCAACCGGCTAATGCg                                                                                                               >  4:51600/1‑151 (MQ=255)
                                        cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCGCAGGCCCGAAA‑‑ACGGGGAGAGGAAGCGGCGACTGCGGac                                                                                                            >  5:1095266/1‑150 (MQ=14)
                                        cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGCGCCAACGCCCCCAA‑‑ACCCGCACAGCACCGCGCTAATGCggcc                                                                                                            >  3:403992/1‑149 (MQ=14)
                                        cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACCGGAACAGCAACCGGCTAATGCgg                                                                                                              >  4:333965/1‑149 (MQ=255)
                                          cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTCGCCGCGGCTATTGCCCGCGCCCAGGCGCGCAA‑‑ACGGGACCAGCAGCAGGCTCAAGCGGAggc                                                                                                          >  2:1116730/1‑149 (MQ=14)
                                           tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTGGCCGCGGCTATGGGCCGAGGCCCAGCCGGCTC‑‑ACGGGCACAGCCCCAGGCGAATGCggtaggc                                                                                                         >  6:1390831/1‑146 (MQ=2)
                                           tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAA‑‑ACCGGCACAGCAAAAGGCTCATGACGAGca                                                                                                          >  5:1345154/1‑149 (MQ=11)
                                                   gTGCCAAAGCACGCAAGCTTTAACATAAACATGCTAATGCCTAGCCAGAATAACATGTCGATTCGCGCAAAGCCGACGTCGAAGCCGTTATTTGCCGTGCCAAAGCGCGCAA‑‑TCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACa                                                                                                 <  4:818446/151‑1 (MQ=255)
                                                       aaaaagaggCAACCTGGAAGATCATCAGCCTAATCACGACCCAGAACAACTTGCCGATCCCCGGAAACCTGCCGTCGAAGCAGCTATAGCCCGCGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGtt                                                                                             <  8:618155/143‑1 (MQ=255)
                                                            cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGCACGCGAGCAA‑‑ACGGGACCAGCACCAGGGTAATGAGGAGCAAGAAGAACAGGttcctac                                                                                        >  6:999664/1‑146 (MQ=14)
                                                              cGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCGATCAA‑‑ACGGGAACAGCAGAAGGGTAATGCGGAGCCCGAAGAGCAGGtggctacgc                                                                                      >  2:504864/1‑143 (MQ=14)
                                                                cAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGAGCAAAGAAGACCTACAAGAAGCTATTGACCGTACCAAATAGAGGAA‑‑AAATGAGCAGGAACCGGATAATTAAAAAACAGAAGAACAGGTTGATCCgggc                                                                                    >  7:429252/1‑151 (MQ=2)
                                                                     tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCCCTATTGCCCGAGCAAAAGCGAGAAA‑‑ACCCGAACAGCAAAACGCTAAAGCGGACCCAGAAGAACTAGTTGCTACTCGCAGAGc                                                                               >  6:1044214/1‑151 (MQ=11)
                                                                             caaccgccaccacccGATCCAGACCTACAGGTCGATCCGCGCAAATTTTCCTTCGAAGCCGCTATTGCACGCGCCAAAGCAATAAA‑‑GCTGGAACATAAACATGCTAATGCGGAACCAGAACAACAGGTTGATCCGCGCAAAGCGGCAGttg                                                                       <  4:1030964/138‑3 (MQ=9)
                                                                             cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACGGGACCAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCAGTCg                                                                       >  2:363297/1‑151 (MQ=255)
                                                                              aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGAGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGtagc                                                                      >  4:1379064/1‑148 (MQ=255)
                                                                               aCAGGCTAATGCCGACGCAGAACAAGTGGCCGATCCACGCAAAGCGGCCGTGGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAA‑‑TCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc                                                                        <  5:1438764/148‑1 (MQ=18)
                                                                                 aGGCTAACGCCGAGCCACAACAACAGGTCGATCCCCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAA‑‑GCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc                                                                   <  2:827028/151‑1 (MQ=14)
                                                                                    cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAA‑‑ACGGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGc                                                                >  3:91935/1‑151 (MQ=14)
                                                                                     tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCGAAAGCCCGCAA‑‑ACGGGAACAGCAGCAGGGTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGAAAAGCTGCAGtggccgcgcct                                                               >  8:1026093/1‑141 (MQ=14)
                                                                                      aaggcggacccACAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑CCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTa                                                              <  8:473327/142‑1 (MQ=14)
                                                                                         cccccaccAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAACCCGCTATTGCCCGAGCAAAACGGCCCAA‑‑GCGGGAAGACCACCCGGCTACGGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTg                                                           <  2:418570/145‑1 (MQ=11)
                                                                                           ggaaccAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAACCAAAGAACGCCC‑‑TCTTGAACAGCAACAGGCTAATGCATAGCCATAATAACAGGTCGATCCGCGCAAAGAAGACAACGAAGCGGGGATTGcc                                                         >  7:682676/5‑150 (MQ=2)
                                                                                           cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTG‑CCGCGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGCGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc                                                        >  2:156216/1‑151 (MQ=255)
                                                                                            gctcccgAACACCAGGCCGATCCCCGCAAACCTGCCGTAGAAGCCGCTATCGCCCGAGCCAAAGCGCGCAA‑‑TCGGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc                                                        <  8:1411487/145‑1 (MQ=255)
                                                                                            gAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAA‑‑ACCGGAACAGCAACCGGCTAATGCCGAGCCAGAAGAACAGGTTCATCAGCGCAAAGCGGCAGTCGCCGCGGCAATTGCAc                                                        >  7:1364589/1‑151 (MQ=14)
                                                                                             aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGAAGACGCGGCTATTGCAcg                                                       >  6:470759/1‑151 (MQ=255)
                                                                                               cctcccctccttgccGATCCCCGTAAATCTTCCGTTGAAGCATCTATTGCCCGCGCCAAAGCGCGCAA‑‑TCTGTAACAGCAACCGGCTAATGCGGATCCAGAACAACATGTTGATCCTCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg                                                     <  1:1260331/137‑1 (MQ=255)
                                                                                               ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCAcgcg                                                     >  1:1115181/1‑151 (MQ=255)
                                                                                                cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCAcgctc                                                    >  6:577383/1‑149 (MQ=255)
                                                                                                cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAA‑‑GCTGGAACAGCTCCCGGCAAAGGCGTAGACAGAAAAACAGGTTGATCAGCGCAAAGATGCCGTCGAAGCGGGTATTgaaaa                                                       >  4:1103194/1‑144 (MQ=11)
                                                                                                 aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGcc                                                   >  2:219475/1‑151 (MQ=255)
                                                                                                  gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCAGCGGCTATTGCACGCGcc                                                   >  8:1278581/1‑150 (MQ=255)
                                                                                                    acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCCCAA‑‑ACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACCCGCCaac                                                >  2:281416/1‑150 (MQ=255)
                                                                                                        cagcgcgcaccGCCCAACGCCGCCGTCCCCCCCGCTATCGCCCGCGCCAAAGCGCGCAA‑‑TCTGGAACAGCAACCGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAc                                            <  2:187017/142‑1 (MQ=14)
                                                                                                         aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCCAAAGCCCg                                           >  4:146148/1‑151 (MQ=255)
                                                                                                            tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGACAAAGCACGCAA‑‑GCTGGAACAGCAACAGGCTAATGCAGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCAGCAGTAGAAGCGGCTATTGCCCACGGCACAACACGctc                                        >  3:122055/1‑149 (MQ=11)
                                                                                                            ccgacccccccAAAGCCGCCGTCGAAGCCTTTATTTAAATTTACAACGCTCGAAA‑‑TCGTGAACAGCAATAGGCTAATGTGTATCCATAATATAAGGTCTTTCCTTGTAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa                                        <  1:277987/141‑1 (MQ=255)
                                                                                                              gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCTGCTATTGCACGCGCACAGGCACGCaaac                                      >  1:1495374/1‑149 (MQ=14)
                                                                                                              gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGAAGAAGCGGCTATTGCACGCGCCAACGCACACaaac                                      >  1:41269/1‑149 (MQ=17)
                                                                                                               ccccGCGCCACCCCGCCGGCGAAGCCGCTATTGCCCGAGCCAAATCGCTCAA‑‑ACTGGAACAGCAACCCGCTAATCCTGCGGCAGACGACCAGTGAGATCGGCGCAAAGGAGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                     <  5:581109/149‑1 (MQ=255)
                                                                                                                  cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCACGCACGCAAGCtcg                                   >  6:542994/1‑148 (MQ=255)
                                                                                                                    cgccccccccccgGCGAAGCCGCTATTGCCCTTGCAAAAGCCCGCAA‑‑ACGGGACCATCACCCCGACAATTCCGAGACAGTAGAACAGCCGGCTCCGCTCAACCCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                <  5:842615/141‑1 (MQ=9)
                                                                                                                    cgaaaaGACGCCGTCGAAGCCGCTATTCCCCGAGCCAAAGCGCGCAA‑‑ACGCGAACAGCACCCTGCTATTGCGGAGGCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                <  2:1102127/148‑1 (MQ=17)
                                                                                                                      cccaGCCGCCGGCGCAGCCGCTCTCGCCCGCGCCAAAGCGCGCAA‑‑TCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTTGAGCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg                              <  2:1138100/148‑1 (MQ=11)
                                                                                                                      cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGacc                                >  8:1043446/1‑147 (MQ=255)
                                                                                                                      cAAAGCCGCCGGCGAAGACTCTATTG‑CCGAGCCAAAGCGCGCTA‑‑ACGTGAACAGCTACCGTCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                             <  4:156584/151‑1 (MQ=17)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAA‑‑TCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGcc                                                                           <  3:201/105‑1 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAGATGGGAAGAG‑AA‑CGGCTAATAACTACACAGAAGAAGAGGTAGATCCGAGCAAAGCGTCCGTCGAAGCAGATATTGCCCGCGCCAACGCGCGCAAgggggggcagc                             >  5:278259/1‑141 (MQ=2)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGc                             >  8:528924/1‑151 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                             >  6:261189/1‑151 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGc                             >  7:973256/1‑151 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCTGGAACAGc                             >  1:70403/1‑151 (MQ=255)
                                                                                                                        aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTCGAACAGc                             >  2:1021162/1‑150 (MQ=255)
                                                                                                                         aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCCAGCAAGCTGGAACAGCa                            >  7:723330/1‑150 (MQ=255)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAACGCACGCAAGCTGGACCAGCACCAgg                       >  6:735806/1‑151 (MQ=255)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCACCAgg                       >  8:563591/1‑151 (MQ=255)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg                       >  5:1176239/1‑151 (MQ=255)
                                                                                                                              ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCACCAGGc                      >  8:1111584/1‑151 (MQ=255)
                                                                                                                               cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCACGCGCCCACGCCCGCAAGCTGGAACAGCAACAgggt                     >  8:887602/1‑149 (MQ=255)
                                                                                                                                gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCt                     >  5:1363073/1‑150 (MQ=255)
                                                                                                                                gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCt                     >  3:462674/1‑150 (MQ=255)
                                                                                                                                 tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCAGGAACAGCAACAGGATa                    >  3:1149952/1‑150 (MQ=255)
                                                                                                                                  cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAt                  >  2:1245998/1‑151 (MQ=255)
                                                                                                                                    aaGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGGTAATGc                >  7:213944/1‑151 (MQ=255)
                                                                                                                                    aaGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCAAAAGCAAACAAGCAGGAACAGCAACAGGATaaatc                >  7:1121170/1‑148 (MQ=25)
                                                                                                                                      gCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATcc                                                                                        <  5:1281799/77‑1 (MQ=255)
                                                                                                                                      gCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTACACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCgg              >  8:1375022/1‑151 (MQ=255)
                                                                                                                                       ccGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGACCAGCAACAGGCTAATGCGGt             >  4:1271039/1‑151 (MQ=255)
                                                                                                                                         gCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCAAAGAGGCTATTGCACGCGCAAAAGCAAGAAAGCTCGAACAGCAACAGGATAATCCGGAAc           >  2:141627/1‑151 (MQ=25)
                                                                                                                                          cTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc          >  5:672194/1‑151 (MQ=255)
                                                                                                                                            aTTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTagc          >  6:41305/1‑147 (MQ=255)
                                                                                                                                               gCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCAAAAGCACGCAAGCAGGACCAGCAGCAGGCTAATGCGGTagaaga       >  3:1269707/1‑144 (MQ=25)
                                                                                                                                               gCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCTCGCACAGCAGCAGGCTAATGCGGTACAagaa      >  3:546641/1‑150 (MQ=25)
                                                                                                                                                cccGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCAGCAAGCTGGCACAGCACCAGGCTatggcccgagcaga       >  5:225708/1‑135 (MQ=25)
                                                                                                                                                  cGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCACGCAAGCTGGCACAGCACCAGGCTAATGCGGTACCaga       >  6:1253383/1‑146 (MQ=255)
                                                                                                                                                   gAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAGGCACGCAAGCTGGCACAGCAACAGGATAATGCGGTACCagaagacc  >  1:1323007/1‑148 (MQ=255)
                                                                                                                                                    aGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc  >  4:70728/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708753‑1709049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑