Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9300CA24.6% 369.1 / 39.7 198P671Q (CCG→CAG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (120/27);  new base A (37/11);  total (158/40)
Fisher's exact test for biased strand distribution p-value = 5.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 203 total aligned reads displayed.

CCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708780‑1709080
                                                                                                                                                        |                                                                                                                                                      
ccgcccgcGCAGCCGCTCTTGCCCGTGCCAAAGCTCGCATGCTGTATCAGCAACAGCCTAATGCCTACCCAGAAGAACAGGTCGATCCTATCAAACCAGGAGTCGAAGCCGATATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAAcc                                                                                                                                                        <  4:268102/151‑1 (MQ=255)
    cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCCACGCCCGCAA‑‑ACGGGACCAGCACCAGGCt                                                                                                                                                    >  2:1000364/1‑151 (MQ=14)
       cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGCGCCCACGCCCACAA‑‑ACCCGAACAGCACCAGGATaa                                                                                                                                                  >  7:1089513/1‑150 (MQ=14)
        gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCCACGCGCGCAA‑‑ACGGGAACAGCACCCGGCTAATg                                                                                                                                                >  2:297235/1‑151 (MQ=255)
         cagcagcTCTTTCCCGGGCCTAAGCTCGCAAGCAGGAACACCAACAGGAAAATCCCGACGCAGAACAACTTGGGGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGc                                                                                                                                               <  6:568001/150‑1 (MQ=255)
         aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCGAACGCGCGCAA‑‑ACGGGACCAGCACCCGGCTCATGc                                                                                                                                               >  8:397715/1‑151 (MQ=17)
          aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGCGAACAGCAACCGGCTAATGCg                                                                                                                                              >  4:51600/1‑151 (MQ=255)
             cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACCGGAACAGCAACCGGCTAATGCgg                                                                                                                                             >  4:333965/1‑149 (MQ=255)
               cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTCGCCGCGGCTATTGCCCGCGCCCAGGCGCGCAA‑‑ACGGGACCAGCAGCAGGCTCAAGCGGAggc                                                                                                                                         >  2:1116730/1‑149 (MQ=14)
                tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGCGCGAAGGCCAACAA‑‑ACCGGACCAGCAACAgggtgttgacgagcc                                                                                                                                         >  1:362189/1‑137 (MQ=11)
                  ttGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAGGAACAGCTCCCTCCGCCCCACGAGGCCGTCGAAGCGGGGATTGCGCGGGCCAAAGCCCGCAA‑‑GCTGGAACAGCACGCGGcgcctgcggggcgcgg                                                                                                                                      >  2:262166/1‑136 (MQ=2)
                        gTGCCAAAGCACGCAAGCTTTAACATAAACATGCTAATGCCTAGCCAGAATAACATGTCGATTCGCGCAAAGCCGACGTCGAAGCCGTTATTTGCCGTGCCAAAGCGCGCAA‑‑TCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACa                                                                                                                                <  4:818446/151‑1 (MQ=255)
                         tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAA‑‑ACCCGACCAGCAGCAGGCTAAATCCGAGCCagaagacc                                                                                                                                 >  6:702895/1‑147 (MQ=11)
                          gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGACGCGGCTATTGCCCGCGCCAAAGCCCGAAA‑‑ACGGGACCAGCAGCAGGGTCATGCGGAGCCcgaagagctcg                                                                                                                              >  7:1439044/1‑146 (MQ=14)
                                  cccccaccgccaaCAGCAACAGGCTAATGATTACACACAAAAAAAGGTCTAGCCGCGAAAACCCGCCGTCTTCTCTGCTGATGGCCGCTCCTAAGATCGCAA‑‑GCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcg                                                                                                                      <  6:426789/140‑1 (MQ=9)
                                  aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCAGCGGCTATTGCCCGCGCCCAGGCCACCAA‑‑ACCCGACCAGCACCCGGGTATTCACGAGCAAGAAGACGAGGtaggacac                                                                                                                      >  8:1040611/1‑144 (MQ=2)
                                  aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAGAAA‑‑ACCCGAACAACAACCGAATAAAGACGAGGCAGAAGAAAAGGTTGATcat                                                                                                                      >  4:1047318/1‑149 (MQ=14)
                                      aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGCCGCCGCTATTGCCCGCGCGAAGGCCCGCAA‑‑ACCCGCCCAGCAACAGGCTAATGACGAGCCAGCAGCACAgctccatccccga                                                                                                                   >  5:1362854/1‑138 (MQ=2)
                                        gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGAGGAGCCAGAAGAACAGTTTGCTACGCGCac                                                                                                                 >  6:1024350/1‑149 (MQ=17)
                                         cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCAAAA‑‑ACGCGAACAGCAACAGCCTAATGAGGAGCCAGAAGACCAGGTTTAACcgccgaa                                                                                                                 >  5:1225274/1‑145 (MQ=14)
                                           ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCAGAAAAGAACACAC‑‑TCGTGAACAGAAACAGGCTAATCAAGAGCAATAATAACAGGTGGATCcgctaaaata                                                                                                              >  4:1007965/1‑143 (MQ=2)
                                                aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGCAGCCGCTATTGCCCGAGCCAAAGCCACCAA‑‑ACGCGAACAGCACCAGGCTAATCCGGAGCCAGAACAACACGTCCAACCGCGCAAAGCTGc                                                                                                           >  8:102438/1‑148 (MQ=14)
                                                aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCCAAAA‑‑AAGCGAACAGCAACCTCCTAATGCGGAACCAGAACAACAAGTTTATACGAGCAAAGCGGCCgc                                                                                                        >  4:1472818/1‑150 (MQ=255)
                                                  cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACGGGACCAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCAGTCg                                                                                                      >  2:363297/1‑151 (MQ=255)
                                                   aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACAGGCTAATGCGGAGCCTCAGGAGCGCGTGGATCAGCGCAAAGCTGACGGCg                                                                                                      >  3:407191/1‑150 (MQ=14)
                                                      aGGCTAACGCCGAGCCACAACAACAGGTCGATCCCCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAA‑‑GCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc                                                                                                  <  2:827028/151‑1 (MQ=14)
                                                           aaggcggacccACAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑CCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTa                                                                                             <  8:473327/142‑1 (MQ=14)
                                                           aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCt                                                                                              >  2:190899/1‑150 (MQ=255)
                                                           aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAA‑‑ACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACACGTAGATCCGCGCAAAGCTGCAGTGGCAGCGGCt                                                                                              >  7:420412/1‑150 (MQ=17)
                                                              gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTg                                                                                          >  3:1061157/1‑151 (MQ=255)
                                                              cccccaccAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAACCCGCTATTGCCCGAGCAAAACGGCCCAA‑‑GCGGGAAGACCACCCGGCTACGGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTg                                                                                          <  2:418570/145‑1 (MQ=11)
                                                               ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGc                                                                                         >  5:749303/1‑151 (MQ=255)
                                                                ggaaccAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAACCAAAGAACGCCC‑‑TCTTGAACAGCAACAGGCTAATGCATAGCCATAATAACAGGTCGATCCGCGCAAAGAAGACAACGAAGCGGGGATTGcc                                                                                        >  7:682676/5‑150 (MQ=2)
                                                                cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTG‑CCGCGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGCGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc                                                                                       >  2:156216/1‑151 (MQ=255)
                                                                 gctcccgAACACCAGGCCGATCCCCGCAAACCTGCCGTAGAAGCCGCTATCGCCCGAGCCAAAGCGCGCAA‑‑TCGGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc                                                                                       <  8:1411487/145‑1 (MQ=255)
                                                                    cctcccctccttgccGATCCCCGTAAATCTTCCGTTGAAGCATCTATTGCCCGCGCCAAAGCGCGCAA‑‑TCTGTAACAGCAACCGGCTAATGCGGATCCAGAACAACATGTTGATCCTCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg                                                                                    <  1:1260331/137‑1 (MQ=255)
                                                                    ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCAcgcg                                                                                    >  1:1115181/1‑151 (MQ=255)
                                                                    ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATCCGGAGCCAGAAGAACAGGTTGATACGCGCAAAGCTTCCGTCGAAGCGGCTATTGCAcgcg                                                                                    >  5:1166809/1‑151 (MQ=255)
                                                                     cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCAGTGGCCGCGGCTATTGCCCgcgc                                                                                   >  5:1398707/1‑151 (MQ=17)
                                                                       gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCAGCGGCTATTGCACGCGcc                                                                                  >  8:1278581/1‑150 (MQ=255)
                                                                        aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAA‑‑GCTGGAACAGCAACAGAAAAATACAGAGACATATGAACAGATAGATGAGCGCAAAGAGGACGTCGAAGAGGCTAGTGCaagagaaa                                                                                 >  4:1270584/1‑143 (MQ=2)
                                                                                 tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGACAAAGCACGCAA‑‑GCTGGAACAGCAACAGGCTAATGCAGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCAGCAGTAGAAGCGGCTATTGCCCACGGCACAACACGctc                                                                       >  3:122055/1‑149 (MQ=11)
                                                                                  cgccccccccAAAGCCCCCGACGACGCCCCTCCTCCCCGAGCCAAAGCACGCAA‑‑TCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa                                                                        <  3:528761/140‑1 (MQ=14)
                                                                                   gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCAAGAAAGc                                                                     >  6:1312114/1‑151 (MQ=255)
                                                                                   gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCTGCTATTGCACGCGCACAGGCACGCaaac                                                                     >  1:1495374/1‑149 (MQ=14)
                                                                                   cccccccgcAAAGCATGCGTCGAAGCCGCTATTGCCCGACCCAAACCGATCAC‑‑GCGTGATGAGCTAAGTCGTTATCTCTAGCCAGAAGAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc                                                                     <  6:1222715/145‑1 (MQ=9)
                                                                                    ccccGCGCCACCCCGCCGGCGAAGCCGCTATTGCCCGAGCCAAATCGCTCAA‑‑ACTGGAACAGCAACCCGCTAATCCTGCGGCAGACGACCAGTGAGATCGGCGCAAAGGAGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                                                    <  5:581109/149‑1 (MQ=255)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCCGCGCGAAAGCCCGCAAGcg                                                                    >  7:1180999/1‑150 (MQ=255)
                                                                                         cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAAc                                                               >  1:437302/1‑151 (MQ=255)
                                                                                          gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCACACGCACGAAAGCGGGacc                                                               >  7:564752/1‑148 (MQ=17)
                                                                                           cccaGCCGCCGGCGCAGCCGCTCTCGCCCGCGCCAAAGCGCGCAA‑‑TCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTTGAGCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg                                                             <  2:1138100/148‑1 (MQ=11)
                                                                                            acaGCCCCCGGCGTCGCCGCTATTTCGATACCCAAAGCGCGCAC‑‑CCTGGCAGAGCACACTTCTACTGGGGAGCGAGAAGTTGTGGTCTATCCTGGGAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                                                            <  2:102652/149‑1 (MQ=9)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAGATGGGAAGAG‑AA‑CGGCTAATAACTACACAGAAGAAGAGGTAGATCCGAGCAAAGCGTCCGTCGAAGCAGATATTGCCCGCGCCAACGCGCGCAAgggggggcagc                                                            >  5:278259/1‑141 (MQ=2)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGc                                                            >  6:317895/1‑151 (MQ=255)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCACGAACAGc                                                            >  3:324631/1‑151 (MQ=255)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGc                                                            >  8:528924/1‑151 (MQ=255)
                                                                                            aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCTGGAACAGc                                                            >  1:70403/1‑151 (MQ=255)
                                                                                              aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCCAGCAAGCTGGAACAGCa                                                           >  7:723330/1‑150 (MQ=255)
                                                                                               gcctgagcagAAGCCGCTAGTCCCCGAGCCTAAGACCTCCA‑‑GAGTGCAGATCATACGGCTGATCCTGAGCCATAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                                                         <  2:1269415/142‑1 (MQ=2)
                                                                                               gccgccGTCGAAGTCGCTATTTCCCGAGCCAAAGCTCGCAA‑‑ACTGTAACAGCAACAGTCTAATGCTGATCGAGTAGCACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                                                         <  4:1303220/151‑1 (MQ=14)
                                                                                               gccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCACGCCCTCAAGGAGGAACAGCacc                                                         >  8:612724/1‑149 (MQ=17)
                                                                                               actgccgTTGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAA‑‑GCTGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAg                                                                              <  3:1194335/127‑1 (MQ=11)
                                                                                                 cgccgTCGAAGCCGCTATTTCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACCCAACCGGGAACAGCAACac                                                       >  6:586795/1‑150 (MQ=255)
                                                                                                 cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                                                         >  2:508894/1‑149 (MQ=255)
                                                                                                  gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg                                                      >  2:1101534/1‑151 (MQ=255)
                                                                                                   ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCACCAGGc                                                     >  8:1111584/1‑151 (MQ=255)
                                                                                                    cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCACGCGCCCACGCCCGCAAGCTGGAACAGCAACAgggt                                                    >  8:887602/1‑149 (MQ=255)
                                                                                                        gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCACGCAAGCTGGAACAGCAACAGGCTAATg                                                >  5:1069621/1‑151 (MQ=255)
                                                                                                           gCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTACACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCgg                                             >  8:1375022/1‑151 (MQ=255)
                                                                                                            cagCTATCGCCCGCGCCAAAGCGCGCAA‑‑TCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATcc                                                                                                                       <  3:548125/74‑1 (MQ=11)
                                                                                                             cGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGt                                            >  2:72641/1‑150 (MQ=255)
                                                                                                             cGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATCCGGt                                            >  4:641149/1‑150 (MQ=255)
                                                                                                              gCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAACGCACGCAAGCGCGACCAGCAGCAGGCtctagcggagc                                          >  4:1434519/1‑141 (MQ=21)
                                                                                                              gCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCAAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCGGtcc                                          >  5:1332415/1‑149 (MQ=255)
                                                                                                              gCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCAAAGAGGCTATTGCACGCGCAAAAGCAAGAAAGCTCGAACAGCAACAGGATAATCCGGAAc                                          >  2:141627/1‑151 (MQ=25)
                                                                                                                tATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCGCACGCCCGCAAGCTGGACCAGCAGCAGGCTGATGCGGtggc                                         >  5:1453518/1‑147 (MQ=21)
                                                                                                                 aTTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAACGCACGCAAGCACGACCAGCACAAGGATAAACCCGTACCat                                       >  7:1362173/1‑150 (MQ=18)
                                                                                                                    gCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCAAAAGCACGCAAGCAGGACCAGCAGCAGGCTAATGCGGTagaaga                                      >  3:1269707/1‑144 (MQ=25)
                                                                                                                        gAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAGGCACGCAAGCTGGCACAGCAACAGGATAATGCGGTACCagaagacc                                 >  1:1323007/1‑148 (MQ=255)
                                                                                                                         aGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc                                 >  4:70728/1‑149 (MQ=255)
                                                                                                                          gCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCAGAAGAACAgg                              >  6:1252487/1‑151 (MQ=255)
                                                                                                                            cAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAGCAGAAGAACAGGtt                            >  6:300510/1‑151 (MQ=255)
                                                                                                                                   cgcAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCcgc                     >  4:199949/1‑151 (MQ=255)
                                                                                                                                     cAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAGCAGGCTAATGCGGTACAAGAAGAACAGGTTGATCCgcgc                   >  1:243614/1‑151 (MQ=255)
                                                                                                                                     cAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGCACCgcgc                   >  8:273056/1‑151 (MQ=255)
                                                                                                                                     cAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc                   >  2:56947/1‑151 (MQ=255)
                                                                                                                                      aa‑‑aCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGATCAGGTTCATACgcgc                   >  3:795345/1‑150 (MQ=255)
                                                                                                                                          aCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCCGTACCAGAACAACAGGTTGCTCCGCGCac                 >  8:638262/1‑149 (MQ=17)
                                                                                                                                           cgcgAACAGCAACCGGCTAATGCCGATCCATAAGAACAGCTTGATCCGCTCAAAGCAGACGTCGAAGCGTCTATAGCACTCTCCAAAGCTCTAAAGATGTAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAg               <  2:177662/148‑1 (MQ=17)
                                                                                                                                            gggAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGAGGTACCAGAAGAACAGGTTGATCAGCGCAAAGc              >  7:959538/1‑151 (MQ=255)
                                                                                                                                             ggAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAGCAGAAGAACAGGTTGATCCGCGCAAAGcc             >  8:540290/1‑150 (MQ=255)
                                                                                                                                                aCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCAGCGCAAAGCGGc           >  4:112660/1‑150 (MQ=255)
                                                                                                                                                aCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACAAGAAGAACAGGTTGATCCTCGCAAAGCGGc           >  6:250485/1‑150 (MQ=255)
                                                                                                                                                  aGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCGGTACCAGAAGAACACGTTGATCCGCGCAAAGCGGCAGt        >  6:531086/1‑151 (MQ=255)
                                                                                                                                                   gCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGtt       >  6:812345/1‑151 (MQ=255)
                                                                                                                                                    aaaCCGGCTAATGCGTAACCACAAGAACAGGTTTATCCGATCAAATCCTCGGTGGTATTCGGTTTTGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTg      <  4:167966/150‑1 (MQ=9)
                                                                                                                                                     aaCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGc     >  6:389965/1‑151 (MQ=255)
                                                                                                                                                     aaCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGttcc     >  3:1447011/1‑149 (MQ=255)
                                                                                                                                                        cGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCcgc  >  2:1245818/1‑151 (MQ=255)
                                                                                                                                                        cGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAACCTCGACCAGCACCAGGCTATAGAGGTAGCAGAAGAACAGGTTGATCCCCGCACAGCCGCAGTTCCcgc  >  5:902795/1‑151 (MQ=37)
                                                                                                                                                        |                                                                                                                                                      
CCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAA‑‑ACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708780‑1709080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑