New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 781446302 (0.630)68 (0.160) 37/260 31.3 17.4% intergenic (+2/‑131) lysZ/lysQ tRNA‑Lys/tRNA‑Lys
?NC_000913 2521487 = 386 (0.930)intergenic (+159/+106) lysV/xapR tRNA‑Lys/transcriptional activator of xapAB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 328 total aligned reads displayed.

GCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGG  >  NC_000913/781296‑781595
                                                                                                                                                       |                                                                                                                                                     
 ccactCAGCCTGCACGCCCCACCACTCTTAATTATTGTCTCGTAGGTTATATCATTGATTTAACAACCTTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCATTTGCG‑CGAAGGTTGGAATCCTGCACGACCCACCAAtt                                                                                                                                                      <  2:630075/147‑1 (MQ=2)
   aGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGACTAAAAATATTTCAAGAAACACCCGTATGGGTCGTAACCTCAGTTGGTAGAGAAGTTTAATATTAATCAATTGGT‑CGCAGGGTCGAATCCTGCACGACCCCCCAAgtt                                                                                                                                                     >  3:608429/1‑150 (MQ=21)
   aGTCATCCTGCACGACCCACCAATATTAAAGATTTGACCCGAGTAAAAATGTTTCAGGTAACACCACTATGGATCGTTAGCTAAGTTTGTAGAGAAGGTGACTTTTAATCAATTGGT‑CGAAGGTTCGAATACTGAAATACCCACCAAttt                                                                                                                                                     >  2:1679263/1‑150 (MQ=21)
        tCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTaaaact                                                                                                                                               >  8:1371879/1‑148 (MQ=255)
          cTGCACGACCCACCAATCTTAAAGATAGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATCGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTGTTAATCAATTGGT‑CGCAGGTTCGAATCATGCACGACCCACCAATGTaaataagc                                                                                                                                             >  6:482484/1‑146 (MQ=21)
            gaaCGACCCACCAATCGTAAATATGGGCCCCGAGTAAAAATCTTTCAGGTACCCCCCGTTGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                                                                                                            <  6:1861113/148‑1 (MQ=21)
              aCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                                                                                                          >  5:880183/1‑150 (MQ=255)
                gccccACCACTCTTAAAGATTGGCCCCGAGTAAAAATATTCCAGCTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAAt                                                                                                                                                       <  4:819990/133‑1 (MQ=255)
                  cccACCAATCTTAAAGATTGGCCCCGACTAAAAATCTTTCAGGTAACACCCGTATGGCTCGTAAGCTCAGTTGGAAGAGCAGTTGACTATAAATCAATTGCT‑CGCAGGTTCCAATCCTCCACGACCCACCAATCTaaaaaagctaactaa                                                                                                                                      >  2:1486630/1‑138 (MQ=255)
                   ccaccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                                                                                                     >  8:834436/1‑150 (MQ=255)
                     accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAACAATTGGT‑CGCGGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                                                                                                     >  5:162566/1‑148 (MQ=255)
                      ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                                                                                                 <  5:129824/151‑1 (MQ=255)
                        aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                               <  8:637814/151‑1 (MQ=255)
                        aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                               <  4:72224/151‑1 (MQ=255)
                        aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGATCAGATTAAAGGAGTTGAT‑CGAAAGATGGTAGCGGGAACTAGCCACCAATTTAAAGGTCGTTAcatgaacata                                                                                                                                >  3:1769893/1‑141 (MQ=255)
                          tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaaagcg                                                                                                                                            >  1:1019061/1‑130 (MQ=255)
                            ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTTGTTACTGGTAGAGAACGTg                                                                                                                           >  1:128745/1‑151 (MQ=255)
                            ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                                                                                                           >  7:37492/1‑151 (MQ=255)
                             tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                                                                                                           >  2:388371/1‑150 (MQ=255)
                                    tggggcggcgTAAACATCTATCAGGAAACACCCGGTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCA‑CAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATaa                                                                                                                   <  4:328637/141‑1 (MQ=18)
                                    tGGCCGCGTTTAATATTCTTTCAGGAACCACCCCAACGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCATTTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATa                                                                                                                    <  7:1011109/150‑1 (MQ=18)
                                      gCCCCGAGTAAAAATCTTTCATTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCATTTTCCTTTTACTGAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACg                                                                                                                 <  1:1681882/151‑1 (MQ=25)
                                        cccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                                                                                                                >  1:1091850/1‑116 (MQ=255)
                                        cccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGAGGTGGACTTTTAATCAATTGGTACGC‑GGTTCGCATGCTGCACGCCCCACGAAGTTAAAGTTGTTTACTCGTAGAGACCGTGATGGCTCACGtt                                                                                                               >  7:1090530/1‑151 (MQ=21)
                                          cGAGTAAAAATGTTACAGTTAACACCCGATTGGCTCGGTAGATCAGTTGGTCGAGCAGTTCACTTTTAATAAATTGTG‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGc                                                                                                             <  4:1297635/151‑1 (MQ=21)
                                           gAGTAAAAATCTTTCATTAAACAACCTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCg                                                                                                            <  7:718930/151‑1 (MQ=21)
                                               aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGGTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAGCTGGTGCCTCGTGGCGAAAGTGTAGGAtcaggtatcgtgat                                                                                                        >  6:1600205/1‑138 (MQ=17)
                                                 aaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCa                                                                                                      <  7:1581925/151‑1 (MQ=255)
                                                  aaTCATTCAGCCAACACCCGTATTGTTCTTTAGCTAAGTTGGTAGAGCAGTTGACTTTTAATCACTCTGT‑AGCAGCTTCGACTCCTGCACGACCCACCAATTTAAACGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCaa                                                                                                     <  6:1008496/151‑1 (MQ=21)
                                                            gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGa                                                                                             >  2:868798/1‑149 (MQ=255)
                                                                 aacctcttGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCga                                                                                      <  2:1218860/144‑1 (MQ=255)
                                                                         gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTCAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt                                                                              >  3:1426882/1‑151 (MQ=255)
                                                                         ggctCGATAGCGCAGTTGGTAGAGCAGTTGACTTTTTATCAATAGGT‑CGCAGGGTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt                                                                              <  6:1651136/148‑1 (MQ=18)
                                                                           gTCGTTAGCTCAGTTGGTAGAGCACTGGACTTTTAATCAATTGGG‑CGCAGGTTCCAATCCTCCACGACCCACCAATTTAAAGGTGGTTACTGGTAGACAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCg                                                                            <  4:868812/151‑1 (MQ=18)
                                                                               ttAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGAAGGTTCTAATCCTGCACGACCCACCAATTTAAAGGTTGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGt                                                                         <  5:9502/150‑1 (MQ=255)
                                                                                 aGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCACTTTAAAGGTGAAAAAAGGAAGAGAACGGGAAAGATAACCTTTCGTTAGCAACCGCCCGAACGGCgaga                                                                                    >  3:524637/1‑137 (MQ=17)
                                                                                    tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAAAGCTTACTAATAGAGCACTTGAACTATAACCTTGCGTAAGCAAATGCACCAAGGGCGAGAGGaactattctaaa                                                                      >  5:335367/1‑138 (MQ=9)
                                                                                     cAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCTAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTg                                                                  <  2:1607676/151‑1 (MQ=255)
                                                                                     cAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCt                                                                   <  4:463150/150‑1 (MQ=255)
                                                                                      aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGc                                                                 <  5:474908/151‑1 (MQ=255)
                                                                                      aGTTGGTAGAGCAGGTCAATTTTAATCAATTGTT‑CGCAGGTTCGAATCCTGCACTACCCACCAATTTAAAGTTGGTTACTGTTAGATAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGc                                                                 <  8:930371/151‑1 (MQ=18)
                                                                                       gttgttAGAGCATTTTACTTTTACTCCATGGGT‑CTCATGTTCTAATCCTGCACGACTCTCCAATTTACAGGTGGTTACTGGTAGTTAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCa                                                                <  2:1115500/151‑1 (MQ=18)
                                                                                         tGGTAGAGCAGTTGACTTTTAATCATTTGGG‑CGCAGGTGCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                               <  7:759584/150‑1 (MQ=255)
                                                                                          ggTAGAGGAGTTTACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACTACCAACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGTATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACg                                                              <  4:1543880/150‑1 (MQ=255)
                                                                                            gagagCAGGTGACTTTTAATCAATTGTT‑CGCAGGATCTAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAcc                                                           <  4:942072/150‑1 (MQ=255)
                                                                                                 cAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccacc                                                       >  7:1821986/1‑150 (MQ=255)
                                                                                                  aGTTGAGTTTTAATCAATTGCT‑CCCCGGTTCTACGCCTGCTCGACCAACCAATTTAATTGTGTTTTGTGGTATAGACGGTGAAGTATAACTTTGCGTTAGAAACGGGCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                     <  7:1649245/151‑1 (MQ=12)
                                                                                                  aGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                                                                                                              >  1:993025/1‑62 (MQ=40)
                                                                                                  aGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                                                                                                              <  2:991097/62‑1 (MQ=40)
                                                                                                   gtggACTTTTAATCAATGGGG‑CGCAGGCGCCAATCCGGCACCACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATc                                                    <  7:1301881/148‑1 (MQ=18)
                                                                                                     tGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTTACTGGTAGAGAACGTGATGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAAGAAGTAGAGTCATCCTGCACGACCCAACATCCt                                                  >  6:922284/1‑151 (MQ=255)
                                                                                                     tGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGCTAACTGGTAGAGAAGGTTAAGGATAACGTAGAGTTAGAGAGTGCCCGAAGGGCGAGAGGAAGTAGAGTCATACTGCAAGACcccccaagct                                                  >  7:122943/1‑147 (MQ=18)
                                                                                                     cgACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTTGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATcc                                                   <  5:1106887/149‑1 (MQ=255)
                                                                                                       aCTATTACTCAATCCGT‑CGCATCTACTAATCGTGCACGACCCACCAATTTCAAGGCGGTTACTCGTTGTTAACGTGAAGGATAACGTTGCGGTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTg                                                 <  3:1304855/150‑1 (MQ=18)
                                                                                                        cTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAGGTCGAGTCCGCCTGCACCACCCCCCCGCCTGa                                                >  7:878893/1‑150 (MQ=18)
                                                                                                         ttttATTCAATTGGT‑CGCCGGTTCTAAGCCTGCACTACCCAGCAATTTAATGGTGGTTGGTGGTTGAGCAGGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGaa                                               <  4:42670/150‑1 (MQ=18)
                                                                                                          ttttttaaaTTGGT‑GGCCGTTTCGAATCCTTCACTTCCCACCAATTTAAAGTTGTTTTCTTGTTTAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGTCGAGACGAATTCGAGTCATCCTGCACGACCCACCATCCTGaa                                               <  3:208257/142‑1 (MQ=18)
                                                                                                          ttaaaTCACTTTGT‑CCCACCTTCCCATCCAGCATGTCCCACCAATTTAATCTTGGGTTCTGTTAGTTAACGTGAAGGATAACGTTGCGTTAGCAACGGGCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGaa                                               <  5:416924/146‑1 (MQ=12)
                                                                                                           ttATTCAATTGGT‑CGCAGGGTCCAATCCTGCACTACCCACCAATTTAACGGTGGTTACTGGTAGAGAACGTGAAGCATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATg                                             <  1:678852/150‑1 (MQ=21)
                                                                                                           ttAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATGTAAACGTGGGTACTGCTAGAGCACGTGAACTATAACGTTGCGTTAGCCACTGCCCGCAGGGGCCGACGACGTCGAGTCATCCTGCACGACccacaagacggaatgt                                            >  1:857747/1‑139 (MQ=17)
                                                                                                               tCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAAAGCGACCTAAAAGAGAAATTTAACAATAACGTAGAGGGAGCACCTGCCAAAAGGGCGTGCCGAATTCGAGTCATACTGAACGACCCCCAATACTGAAtaaaaa                                         >  8:1890635/1‑145 (MQ=0)
                                                                                                                cAATTGGT‑CGCAGGTTCCAATCCTGCAGGACCCACCAATTTAAATGTGTTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTaa                                        <  5:1852978/150‑1 (MQ=255)
                                                                                                                aaaTTGTT‑CGCAGGTTCTAATCCTGCACGACCCACCAATTTAAATTTTTTTACTGTTTGTTAACGTGAATGATAACGTTGCGTTAGAAACGGCCCGAAGTGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAg                                       <  8:1001286/150‑1 (MQ=21)
                                                                                                                aaaTTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAg                                       <  3:402426/150‑1 (MQ=255)
                                                                                                                 aaTTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAgg                                      <  6:358125/151‑1 (MQ=255)
                                                                                                                 aaTTGGG‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAgg                                      <  4:259424/151‑1 (MQ=255)
                                                                                                                     ggT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgcagc                                  <  6:618893/151‑1 (MQ=255)
                                                                                                                     ggT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAAGTGAAGGATAACGTTGCGTAAGCAAAGCCCCCAAGGGCGAGACAAAGGCGAGTCATCCAGCACGACCCACCAGCCTGAATGATTAAGgcagc                                  >  5:580322/1‑151 (MQ=21)
                                                                                                                          gCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGCTGACTGGTGGAGAAATTTAGGTATAACCTAGCCTGAACATCGGCCCGGAGCGCGTGTCCAAGGCGCGGCCTAGTGGCGGACCCCCCATCCTGCATGAGTAAGCCAGAATa                               >  6:1426024/1‑150 (MQ=255)
                                                                                                                           cAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAAt                             <  8:1314907/151‑1 (MQ=255)
                                                                                                                           cAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAAt                             <  4:171347/151‑1 (MQ=255)
                                                                                                                              gTTCGAATCCTGCACGATCCACCTATTTAAATGTTGTTACTGTTATTGAACGTGTAGTATAACGTTGCGTTAGCAACTGGCCGAAGGGCGAGAGGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATccc                          <  8:1434893/151‑1 (MQ=25)
                                                                                                                               ttCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACTGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTCAATGATTAAGGCAGCATAATCCCg                         >  3:819096/1‑151 (MQ=255)
                                                                                                                               ttCGAATCCTGCACGACCCACCAATTTAAAGGAGCGGACTGGTAGAGCAATTTAAGGATAACCTAGAGGTAGAAACGGGCCGAATGGCGAGACGAAGTCGAGTAATCCTGGACGACGCACCATCCAGAATGATTAAAGAAGAATAATCCCg                         >  3:790372/1‑151 (MQ=255)
                                                                                                                                tCGAATCCTGCACGACCCACCAATTTAAAAGTGCTTACTTGTAGAGAACTTGAACTATAACGTTGCGTAAGAAACTCCCAGAAGGGCGAGAATAAGTCGAGTCATCAAGCACGACCCACCATCATGAATGATTAAGGCAGCATAATCACGc                        >  3:88171/1‑151 (MQ=25)
                                                                                                                                      ccTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAggg                   <  4:658310/150‑1 (MQ=255)
                                                                                                                                      ccTGCACGACCCACCAATTTAAACCTGCTTACTGCTAGAGAACTTGAAGGATAACGTTGACTTAAAAAAGGCCCGAATGGAGACAAGAAGTCGAGTCATCCAGAACGACCCAACATACTGATTCATTAAGGCAGCATAAAACCCGAAgggg                  >  4:1849208/1‑151 (MQ=255)
                                                                                                                                      ccTCCACGCCCCACCAATTTAAACGTGCTTACTGCTATATAACGTGAAGGATAACGTTGCGTTAGCAACGGGCCGAAGGGCGAGACGAAGGCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAgggg                  <  6:778902/151‑1 (MQ=25)
                                                                                                                                       cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAggggg                 >  2:449121/1‑150 (MQ=255)
                                                                                                                                       cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATAAAGGCAGCATAATCCCGCAAggggg                 >  5:1197212/1‑150 (MQ=255)
                                                                                                                                        ggCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTc                <  6:1292512/150‑1 (MQ=255)
                                                                                                                                         gctctaccaaccaATTTAAATGTTGATACTGTTATTTATCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTc                <  8:1222307/145‑1 (MQ=21)
                                                                                                                                         gCACGACCCATCAATTTAAATTTTTTAACTGTTATTTAACGTGAAGTATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCg               <  8:1639336/151‑1 (MQ=21)
                                                                                                                                         gCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGt                 <  3:161162/149‑1 (MQ=255)
                                                                                                                                           aCGACCCACAAATTTAAAGGTGTTTACTGTTAGAGAACGTGAAGTATAACGTTGCGTTAGAAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt             <  7:1362135/151‑1 (MQ=255)
                                                                                                                                            cGACCCACCAATTTAAAGGTTGTTACTGTTATATAACGTGAACGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTa            <  1:301412/151‑1 (MQ=255)
                                                                                                                                            cGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGttt            >  5:147682/1‑150 (MQ=255)
                                                                                                                                            cGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt             >  2:1025217/1‑150 (MQ=255)
                                                                                                                                             gACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGCCCCACCATCCTGAATCCTTAAGGCCGCATAATCCCGCACGGGGTAGta             >  7:172013/1‑148 (MQ=25)
                                                                                                                                              acctatcaATTTAAAGGTGGCTACTGCTATATAACGTGAAGGATAACGTTGCGTTAGCAACTGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTa            <  8:313455/143‑1 (MQ=25)
                                                                                                                                              aCCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAgg          >  8:380017/1‑150 (MQ=255)
                                                                                                                                              aCCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGCTCGTTAGc          >  4:1003795/1‑151 (MQ=255)
                                                                                                                                               cgcaccaATTTAAATGTGGTTACTGCTATAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCt         <  1:1861914/149‑1 (MQ=255)
                                                                                                                                               cccACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCt         >  6:23537/1‑151 (MQ=255)
                                                                                                                                                ccacgaATTTAACGGTGGTTTCTGGTAGAGAACGTGAAGGATCACGTGGCGTCAGCAACGGCCCGAAGGGCTAGACGCAGGCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTc        <  6:661898/151‑1 (MQ=37)
                                                                                                                                                ccaccaATTTAAAGGTTGTTACTGTTAGAGATCGTGTTGTATAACGTTGCGGTAGCAACGGCCCGAAGTGCGAGAGGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTc        <  2:1733939/151‑1 (MQ=37)
                                                                                                                                                 caccaATTTAAATGGGCTTACTTGTAGAGACCGTGCAGGTTAAAGGTGCGGTATCAAGGGCCCGAAGGGCGAGACGAAGGCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCa       <  1:1438832/151‑1 (MQ=25)
                                                                                                                                                 caccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACTGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCa       <  6:1190592/151‑1 (MQ=255)
                                                                                                                                                 caccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCa       <  7:607428/151‑1 (MQ=255)
                                                                                                                                                 caccaATTTAAAGGTGGTTACTGGTAGAGAACGTCAAGGATAACGGTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCa       <  2:128393/151‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
GCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGT‑CGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGG  >  NC_000913/781296‑781595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.