BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	915,213	0	A	C	26.4%	263.2 / 36.7	215	intergenic (‑356/+139)	ybjE/aqpZ	putative transporter/aquaporin Z
Reads supporting (aligned to +/- strand): ref base A (118/24); new base C (51/0); total (179/36)
Fisher's exact test for biased strand distribution p-value = 7.63e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 217 total aligned reads displayed.

CGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTT  >  NC_000913/915065‑915363

cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGAtt                                                                                                                                                           >  8:1897680/1‑151 (MQ=14)

cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGAtt                                                                                                                                                           <  1:1281850/151‑1 (MQ=31)

 ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTg                                                                                                                                                          >  6:1393593/1‑151 (MQ=14)

 ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTg                                                                                                                                                          <  7:1535916/151‑1 (MQ=31)

   ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGg‑‑c                                                                                                                                                      <  3:451176/151‑1 (MQ=31)

    gCAGCCCAGATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGg‑‑cc                                                                                                                                                     <  1:820848/151‑1 (MQ=14)

    gCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGg‑‑cc                                                                                                                                                     <  4:289682/151‑1 (MQ=31)

    gCAGCCCACAAGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGg‑‑cc                                                                                                                                                     <  1:885415/151‑1 (MQ=14)

     cAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGGGCTTGg‑‑ccc                                                                                                                                                    >  6:1512996/1‑150 (MQ=9)

      aGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGg‑‑ccgc                                                                                                                                                   <  4:1379788/151‑1 (MQ=31)

          cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGccccc                                                                                                                                               <  2:893476/151‑1 (MQ=31)

          aacatgcattagcgCTGAGGGCGCGTTTTAAAGGCATGTTACCTAGAGCCCGACACGGTAGCCGTAAGGGATAAGTCGAGGGCAACGCCCACCCGCGAATTTCTTCGCCAGAGCACGCAGGTGCA‑CGGGGCGGCGGCGATTGG‑‑CCGccccc                                                                                                                                               >  8:1548819/14‑151 (MQ=2)

            caTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑g                                                                                                                                           <  8:22819/151‑1 (MQ=31)

            caTGGAGGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑g                                                                                                                                           <  1:725675/151‑1 (MQ=14)

                 aTGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGGGCTTGG‑‑CCGCCCCCT‑‑gcgcgc                                                                                                                                      >  8:879133/1‑151 (MQ=14)

                   gtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTc                                                                                                                                    >  2:894900/1‑151 (MQ=31)

                   gtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGCTTGG‑‑GCGCCCCCG‑‑gcgcgcgc                                                                                                                                    >  6:588393/1‑149 (MQ=255)

                       gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTg                                                                                                                               >  1:12304/1‑151 (MQ=31)

                        cTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTgc                                                                                                                              >  8:464413/1‑151 (MQ=14)

                        cTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTgc                                                                                                                              >  3:1138187/1‑151 (MQ=31)

                         tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTgcg                                                                                                                             >  6:1128921/1‑151 (MQ=31)

                             ggCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGcc                                                                                                                           >  5:1078087/1‑149 (MQ=31)

                             ggCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGAGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAg                                                                                                                         <  5:776809/151‑1 (MQ=14)

                              gcgcGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCCGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGt                                                                                                                        >  4:724827/1‑151 (MQ=14)

                                gcgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTgg                                                                                                                      >  2:1797267/1‑151 (MQ=32)

                                gcgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑GTGCGCCAGTgg                                                                                                                      >  8:489926/1‑151 (MQ=17)

                                  gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGCCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGGGGGGCGGTG‑‑GCGCCCCCC‑‑GCGCCCGCC‑GTgcggccgggctt                                                                                                                    >  7:1159853/1‑142 (MQ=11)

                                    tttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCCCCCCCG‑‑GCGCGCGCC‑GTGCGCCCGTGGCCat                                                                                                                  >  7:890565/1‑151 (MQ=11)

                                      tACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTATGGGCTAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCG‑TTGCGCCAGTGGCAatat                                                                                                                >  6:1154147/1‑151 (MQ=255)

                                      tACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAatat                                                                                                                >  2:1539263/1‑151 (MQ=37)

                                        cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGt                                                                                                              >  3:941779/1‑151 (MQ=38)

                                          gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGGGTGG‑‑CCGCCCCCC‑‑GCGCGCGCC‑GTGCGcccgggggcaaaagttg                                                                                                            >  6:1770656/1‑136 (MQ=11)

                                              tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCtt                                                                                                         >  8:1827666/1‑150 (MQ=255)

                                               gTTACCTCGCGCCCGCCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGCGTGG‑‑CCGCCCCCG‑‑GCGCGCGCC‑GTGCGCCAGGGGCAATATGTTGCtt                                                                                                         >  5:1825007/1‑149 (MQ=14)

                                                  aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑CGGGGCCGCCGCGATTGG‑‑CCGCCCCCG‑‑GCGCGCTGC‑ATGCGCCAGGGGCCATAAGTTGGTTAGCTc                                                                                                    >  4:904910/1‑151 (MQ=14)

                                                    cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCCGCGGCGCTTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCCATATGTTGGTTAGCTCAt                                                                                                  >  4:1569537/1‑151 (MQ=255)

                                                         gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTTG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCCGTGGCAATATGTTGCTTAgggcaagaa                                                                                               >  1:200663/1‑141 (MQ=14)

                                                         gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCGCC‑TTGCGCCAGTGGCAATATGTTGGGTAGCGCCTGaa                                                                                               >  1:654127/1‑149 (MQ=255)

                                                           ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑CGGGGGCGCGGGGCTTTG‑‑CCGCCCCCC‑‑GCGCCCCCCGTTGGGCCGGGGGAAATTTTTTGCttgcggaatcaaggc                                                                                            >  7:1674631/1‑138 (MQ=2)

                                                           ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaaacg                                                                                            >  3:1663429/1‑148 (MQ=255)

                                                            cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑ATGCGCCAGTGGCAATATGTTGGTTAGGTCATGAAAggtg                                                                                          >  5:285086/1‑149 (MQ=255)

                                                                 cGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTG‑‑CAGCCCCCT‑‑GCGCGCACC‑TTGAGCCAGAGGCAAAATGTTGCATACCTCATGAAAGCAGCGca                                                                                      >  2:967165/1‑150 (MQ=17)

                                                                 cGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTTCTTAGCTCAAGAAAGGAGCGca                                                                                      >  3:407409/1‑150 (MQ=255)

                                                                     aGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCCCCAGTGGCAAAATGTTGCTTAGCTGATGAAAGGAGCGcaacaa                                                                                  >  2:1419083/1‑150 (MQ=255)

                                                                       ccGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCGCCCCCT‑‑GCGCGCGCC‑GTGCGCCACTGGCAATATGTTGCTTAGCGCAAGCAAGGAGCGcaaca                                                                                   >  6:202762/1‑147 (MQ=17)

                                                                       ccGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCA‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGcaaca                                                                                   >  3:954420/1‑147 (MQ=255)

                                                                       ccGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCCGCGGCGCTTGG‑‑CCCCCCCCT‑‑GCGCCCTCC‑ATGCCCCAGTGGCCATATGTTGGGTAGCTGATGAAAGGAGCGccaca                                                                                   >  8:1604746/1‑147 (MQ=17)

                                                                        cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑AGGGGCCGCGGCGAATGG‑‑CCGCCCCCT‑‑GCCCGCTCC‑TTTCGCCAATGGCAATATTTTTCATATCTCATGAAAGGAGCGCAACAAgatg                                                                              >  5:556043/1‑151 (MQ=17)

                                                                         gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGCATGG‑‑CCCCCCCCA‑‑GCCCGCGCC‑GTGCGCCCGGGGCAATAATTTGCGTAGCTCAAGAAACGAGCGCCACAAga                                                                                >  8:1726884/1‑148 (MQ=14)

                                                                         gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCCGCCGCGATTTG‑‑CCCCCCCCA‑‑GCGCGCTCC‑ATTCGCCAATGGCAATATTTTTCATAAATAAATAAAAGAGCGcaacaaaaat                                                                              >  8:648372/1‑146 (MQ=9)

                                                                            aGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCCGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGatgatg                                                                           >  4:1025965/1‑150 (MQ=255)

                                                                            aGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGAGTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCCACAAgatga                                                                             >  7:1115706/1‑148 (MQ=255)

                                                                             gggATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGATTGG‑‑GCGCCCCCT‑‑GCGCGCGCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGAtgatga                                                                          >  7:441463/1‑150 (MQ=255)

                                                                              ggATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑CGGGGCGGGGGCGCGTGG‑‑CCGCCCCCC‑‑GCGCGCGCC‑CTGCGCCCGGGGCCATATTTTGGGTTGGACATGAAATGTGCGccacaacctgttcaa                                                                         >  4:1216007/1‑141 (MQ=2)

                                                                                      ggtgggCACGGCGCAGGGGCGTTTTTGTTCGCCAGAG‑CCGGGGGGGCT‑GGGGGCGGGGGCTTTTGG‑‑CCGCCCCGT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACatat                                                                <  3:1395908/147‑1 (MQ=21)

                                                                                      cGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCGCCCCCA‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATTTTTCTTATCTCATGAAAGGAGCGCAACAAGATGATGAATAAACatat                                                                >  3:1812184/1‑151 (MQ=18)

                                                                                            cACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCGCCCCCT‑‑GCGCGCGCC‑TTGCGGCAGTGGCAATATTTTGCGTAGCTCATGAAAGGAGCGCCACAAGATGCTGAATCAACATATaacaa                                                           >  1:1876822/1‑150 (MQ=21)

                                                                                            cACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCCGCGGCGCTTGG‑‑CCCCCCCCG‑‑GCGCGCGCC‑GTGCGCCACTGGCAATATGTTGCTTAGCGGATTAAAGGAGCGCCACAAGATGATGAATCAACATATaacaac                                                          >  4:804364/1‑151 (MQ=21)

                                                                                             aCCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGGTTGG‑‑CCGCCCCCG‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCGTAGCGCATGCAAGGGGCGGCACAAGATGATGAATCACCATATaacaac                                                          >  7:1273231/1‑150 (MQ=18)

                                                                                              ccGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCCGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCGTAGCTCATGAAAGGCGCGCAACAAGATGATGAATCAACATATAaccaca                                                         >  1:137626/1‑150 (MQ=255)

                                                                                               cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCCGCGGCGCTTGG‑‑CCCCCCCCC‑‑GCGCGCGCC‑GTGCGCCCGGGGGAAAATTTTGCTTAGCTGATGAAATGAGCGCAACAAGAAGATGAATCAACAAATAAAAACATc                                                       >  1:1647166/1‑151 (MQ=18)

                                                                                               cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑CGGGGCGGCGGGGCTTGG‑‑GCGCCCCCG‑‑GCGCGGGCC‑GTGCGCCCCGGGCAATATTTTTGTTTGGGCATGAAAGGGGCGGAACAAAAATATGTATGAACATATAaaaacaa                                                        >  4:266737/1‑149 (MQ=9)

                                                                                               cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACAt                                                        <  6:1746169/151‑1 (MQ=255)

                                                                                                gcgcAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGGTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAAAAACATc                                                       >  5:372545/1‑150 (MQ=255)

                                                                                                   gggggtttaTTTTGATGGCCGGGGCGGGGGGGTGTG‑GGGGGCGTCTGCTTTGCG‑‑CCCCCCTTG‑‑GCGCGCTGC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaa                                                   <  4:988008/143‑1 (MQ=255)

                                                                                                   cAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTa                                                    >  2:1152882/1‑150 (MQ=255)

                                                                                                      cggcgATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTTG‑‑GCGCCCCCA‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGCGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaa                                                 >  7:987591/1‑150 (MQ=255)

                                                                                                      cggcgATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaa                                                 >  3:203835/1‑150 (MQ=255)

                                                                                                       ggcgATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCGCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACAACTTaaaaa                                                >  6:773839/1‑150 (MQ=255)

                                                                                                       ggcgATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCCCCCCCT‑‑GCGCGCTCC‑GTGCGCCAGTGGCAATATGTTGCTTAGCTAATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaa                                                >  2:182276/1‑150 (MQ=255)

                                                                                                         cgATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑‑CCGCCCCCG‑‑GCGCGCGCC‑TTGCGCCAGTGGCAATATTTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAAATATAAAAACATCTTaaaaaaac                                             >  1:1056342/1‑150 (MQ=25)

                                                                                                         cgATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCCGCGAATGG‑‑CCCCCCCCA‑‑GCCCGCGCC‑GTGCGCCAGTTGCAATATTTTTGTTAGCGGAAGAAAAGGGCGCCACAATATAATGAATAAAAAAATAACAACCAATTaaaaaaa                                              >  3:293769/1‑150 (MQ=9)

                                                                                                          gATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaaacg                                            >  3:1450936/1‑149 (MQ=255)

                                                                                                           aTTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc                                           >  5:349825/1‑151 (MQ=255)

                                                                                                                   cGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCCGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAAGATCTTAAAAAAAGGCCTGACAtt                                   >  2:1689171/1‑151 (MQ=255)

                                                                                                                     gggctgCCGGGGGGGGCG‑GGGGGGGGGGGCGTGTGGGCCCCCCCCCC‑‑CCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACAtt                                   <  4:355091/146‑1 (MQ=255)

                                                                                                                     ccAGAGCCCGGGGGTGCA‑GGGGGCGGCGGGGATTGG‑‑CCGCCCCCT‑‑GCGCGCGCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGCAAGGAGCGCAACCAGATGATGAATCAACATATAACAAAATCTTAAAAAAAGGCCGGACATTAc                                 >  1:1815177/1‑151 (MQ=37)

                                                                                                                     ccAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGATTGG‑‑CCCCCCCCA‑‑GCGCGCTAC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAATGCGCGCAACAAGATGATGAATAAACATATAACAACAACATAAAAAAACGCCTGACATTa                                  >  2:451458/1‑150 (MQ=255)

                                                                                                                         agCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATATTAAAAAAAGGCCTGACATTACGcc                              >  6:1034208/1‑150 (MQ=255)

                                                                                                                           cccGGGGGTGCA‑GGGGGCGGCGGCGGTTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATTTTTCTTAGCTCATGAAAGGAGGGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAAGCCTGCAATTACGCCAgg                           >  8:1228779/1‑151 (MQ=37)

                                                                                                                             cGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGGGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGCATCAACATATTACAACCTCTTTCAAAAAGGCGGGCCCTTACGGCAGGcc                         >  5:1497008/1‑151 (MQ=21)

                                                                                                                              gggggTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCt                        >  8:1164419/1‑151 (MQ=255)

                                                                                                                                  ggggtgaggggggGCGGGGATTGG‑‑GGCCCCCCGGGGCGCGCTCC‑TTGCGGCAGTTGCAATATGTTGCTTATCTCATTATAGGAGCTCAACAAGATGATTAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt                       <  6:42734/144‑1 (MQ=255)

                                                                                                                                  gTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg                    >  5:435272/1‑151 (MQ=255)

                                                                                                                                   tGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGc                   >  1:1409397/1‑151 (MQ=255)

                                                                                                                                   tGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGc                   >  6:1637784/1‑151 (MQ=255)

                                                                                                                                     cA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGAAGAAACAACATATAACAACATATTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGcat                 >  5:343293/1‑149 (MQ=255)

                                                                                                                                      a‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtt                >  8:783512/1‑151 (MQ=255)

                                                                                                                                             cggcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatta           >  5:1676254/1‑150 (MQ=255)

                                                                                                                                             cggcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatta           >  5:716194/1‑150 (MQ=255)

                                                                                                                                             cggcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatta           >  2:1213454/1‑150 (MQ=255)

                                                                                                                                             cggcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCGGCCATTACGCCAGGCCTTCTGCGtgaatta           >  3:1249514/1‑150 (MQ=255)

                                                                                                                                              ggcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACGAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTtaattaat         >  1:380592/1‑151 (MQ=255)

                                                                                                                                               gcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc        >  1:272247/1‑151 (MQ=255)

                                                                                                                                               gcggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc        >  7:133957/1‑151 (MQ=255)

                                                                                                                                                cggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc        >  7:271559/1‑150 (MQ=255)

                                                                                                                                                cggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc        >  5:1251479/1‑150 (MQ=255)

                                                                                                                                                 ggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCATGCCTTCTGCGTTAATTAATCAc      >  2:1000292/1‑151 (MQ=255)

                                                                                                                                                 ggcgATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCAc      >  3:1756374/1‑151 (MQ=255)

                                                                                                                                                 ggcgAGTGC‑‑CCGCCCCCG‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCAc      <  3:679029/151‑1 (MQ=255)

CGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑‑CCGCCCCCT‑‑GCGCGCTCC‑TTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTT  >  NC_000913/915065‑915363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`