BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,308,745	0	T	G	26.0%	703.6 / 72.7	377	intergenic (‑100/‑43)	clsA/yciY	cardiolipin synthase 1/uncharacterized protein
Reads supporting (aligned to +/- strand): ref base T (199/80); new base G (2/96); total (201/176)
Fisher's exact test for biased strand distribution p-value = 1.84e-37
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 404 total aligned reads displayed.

CCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATCCAC  >  NC_000913/1308595‑1308895

     aTCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACTCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCcggggtggggg                                                                                                                                                   >  1:973161/1‑151 (MQ=255)

     aTCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCgggggtggggg                                                                                                                                                   >  7:1692850/1‑151 (MQ=255)

     aTCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCgggggtggggg                                                                                                                                                   <  1:82932/151‑1 (MQ=255)

      tCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCgggggtgggggt                                                                                                                                                  >  3:161011/1‑151 (MQ=255)

          aGAATGCCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATaa                                                                                                                                              <  5:1462676/151‑1 (MQ=255)

           gAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAAt                                                                                                                                             <  4:795747/151‑1 (MQ=255)

           aaaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAAt                                                                                                                                             <  7:49510/150‑1 (MQ=255)

            aaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATg                                                                                                                                            >  3:986003/1‑151 (MQ=255)

            aaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGGCAGCGGCGGGGGTGGGGGTATAATg                                                                                                                                            <  8:87014/151‑1 (MQ=255)

            aaTGCCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATg                                                                                                                                            <  3:765704/151‑1 (MQ=255)

              tGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAACGCACTGGTCAGCGTCGGGGGTGGGGGTATATTGAc                                                                                                                                          >  2:547514/1‑151 (MQ=255)

               ggCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCTAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGAcc                                                                                                                                         >  4:1351850/1‑151 (MQ=255)

                gCCAACCAACTCACAAACGTATAAACGGTTTTCATATATTAGAAATCCTTTTTAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCa                                                                                                                                        <  4:392259/151‑1 (MQ=255)

                  caaccaacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCAtt                                                                                                                                      >  3:637790/1‑151 (MQ=255)

                   aaccaacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGCCCAttg                                                                                                                                     >  8:1404968/1‑150 (MQ=255)

                   aaccaacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGAGCATTc                                                                                                                                     >  2:458313/1‑151 (MQ=255)

                       aacTCACCAACGTATAAACGGTTGTCATATATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGGCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGtt                                                                                                                                 <  6:1427254/151‑1 (MQ=255)

                        acTCACCAAGGTATAATCTTTTGTCATATATTAGAAATCTTTTTGAAAGCTGTTTTTTATGTGTTTACTCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTa                                                                                                                                <  7:1304432/151‑1 (MQ=255)

                             ccAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGc                                                                                                                            >  1:1696182/1‑150 (MQ=255)

                             caaaCTTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCAGGAAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGCGTATAATGACCATTCTGTTATTGCa                                                                                                                           <  7:845846/149‑1 (MQ=255)

                               aaCGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCAt                                                                                                                          >  3:461566/1‑150 (MQ=255)

                                acctataAACGGTTGTCATAGATTACAAATCCTTTTGACAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCCCTGGGCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATag                                                                                                                        <  4:1262516/148‑1 (MQ=255)

                                aCGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTTTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCCGCGGCGGGGGGGGGGGGATAATGACCATTCTGTTATTGCATag                                                                                                                        <  1:147418/151‑1 (MQ=255)

                                  gTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATag                                                                                                                        >  4:8835/1‑149 (MQ=255)

                                    ataAACGGTTGTCATAGATTATAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCCGCGTCGGGGGGGGGGGCATAATGACCATTCTGTTATTGCATAGagta                                                                                                                    <  7:1435036/151‑1 (MQ=255)

                                    ataAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGATATTGCATAGagt                                                                                                                     >  8:102008/1‑150 (MQ=255)

                                     taAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGagt                                                                                                                     >  4:1820271/1‑149 (MQ=255)

                                      aaaCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGCCCATTCTGTTATTGCATAGagtagt                                                                                                                  >  3:1532246/1‑151 (MQ=255)

                                       aaCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGtt                                                                                                                 >  1:1335575/1‑151 (MQ=255)

                                       aaCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTCTTATGAGTTTACCCATATGGATTCATCTGCAAAAAAAAACCGCGGGAAACGCCCTGGGCCGCGGCGGGGGGGGGGGCATAATGACCATTCTGTTATTGCATAGAGTAGtt                                                                                                                 <  6:1548757/151‑1 (MQ=255)

                                        aCGGTTTTCATATATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGAAAATAAAAACGCGGGAAAAGCACTGGTCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTa                                                                                                                <  6:205206/151‑1 (MQ=255)

                                         cGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTa                                                                                                                >  1:1604851/1‑150 (MQ=255)

                                              gTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAAGATg                                                                                                           >  2:1528909/1‑150 (MQ=255)

                                               tCATAGATTAGAAATGCTTTTGAAAGGGCATTGTTATGATTTTACGCATATGGTTTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGGCCGCGTCGGGGGGGGGGGGATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGa                                                                                                          <  1:1893302/150‑1 (MQ=255)

                                               tCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGa                                                                                                          >  5:359201/1‑150 (MQ=255)

                                                cATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCCCTGGTCAGCGTCGGGGGGGGGCGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAg                                                                                                        <  5:533219/151‑1 (MQ=255)

                                                cATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGCCAAATAAACACGCGGGCACAGCACGGGTCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAg                                                                                                        <  2:313618/151‑1 (MQ=255)

                                                cATAGATTAGAAATACTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGaa                                                                                                         <  4:500064/150‑1 (MQ=255)

                                                   aGATTAGAAATCCTTTTGAAAGCTCATTGTTATGAGTTTACGCATATTGATTCATCTGTCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCg                                                                                                      <  8:518221/150‑1 (MQ=255)

                                                     aTTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCgg                                                                                                     >  5:737181/1‑149 (MQ=255)

                                                       tAGAAATCCTTTTGAAAGCGCATTGTTATGAGTATACGCATATGGATTCATCTGCCAAATAAAAACGCGGGAAAAGCACTCGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCgaact                                                                                                  >  3:30036/1‑146 (MQ=255)

                                                        agtaaTCATTTTGATAGCGCATTGTTTTTAGTTTACGCTTATGGAATCATCTGGCAAATTAAAACGCGGGCAACGCCCTGGGCCGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTa                                                                                                 <  6:1820685/147‑1 (MQ=255)

                                                           aaTCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAACACGCGGGAAAAGCACTGGTCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAAc                                                                                             <  7:1803954/151‑1 (MQ=255)

                                                             tCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACgg                                                                                           >  1:930432/1‑151 (MQ=255)

                                                             tCCTTTTGAAAGCGCATTATTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATTGAGTAGTTAAGATGAAGCGGAGTAGAACgg                                                                                           >  5:1217417/1‑151 (MQ=255)

                                                              ccTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGTCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGa                                                                                          <  2:761955/151‑1 (MQ=255)

                                                              ccTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACgg                                                                                           >  4:696500/1‑150 (MQ=255)

                                                               cTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGa                                                                                          >  5:1736638/1‑150 (MQ=255)

                                                                ttttGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  >  2:203868/1‑141 (MQ=255)

                                                                 tttGAACGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGCCAAATAAAAACGCGGGAACAGCACTGGTCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGaa                                                                                         <  3:231667/149‑1 (MQ=255)

                                                                  ttGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAACCGCGGGAAAAGCACTGGGCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGt                                                                                       <  6:997589/150‑1 (MQ=255)

                                                                     aaaGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGGTAACATGAAGCGGAGTAGAACGGAAGTgggg                                                                                   >  3:1180756/1‑151 (MQ=255)

                                                                      aatcgcATTGTTATGAGTTTAAGCATATGGATTCATCTCGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgc                                                                                  <  6:87426/148‑1 (MQ=255)

                                                                      aaGCGCATTGTTCTGAGTTTACGCATATGGATTCATCTCGCAAATAAAACCGCGGGAAAAGCACTGGGCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgc                                                                                  <  5:1276955/151‑1 (MQ=255)

                                                                       aGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgcg                                                                                 >  6:33087/1‑151 (MQ=255)

                                                                        gcgcATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgcgc                                                                                >  7:199068/1‑151 (MQ=255)

                                                                         cgcATTGTTATTAGTTTACGCATATTGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGGCAGCGGCGGGGGGGGGGGGATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCt                                                                               <  6:399858/151‑1 (MQ=255)

                                                                          gcATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTg                                                                              >  7:682864/1‑151 (MQ=255)

                                                                            aTTTTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgc                                                                            <  3:1062085/151‑1 (MQ=255)

                                                                                ttATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCAt                                                                        >  3:1442518/1‑151 (MQ=255)

                                                                                 tATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATg                                                                       >  2:1341898/1‑151 (MQ=255)

                                                                                    gAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGc                                                                      >  6:52107/1‑149 (MQ=255)

                                                                                      gTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCg                                                                  >  6:1176431/1‑151 (MQ=255)

                                                                                         tacctatatTGATTCATCAGTCAAATAAAAACGCGGGAAAACCTCTGGGCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTc                                                                <  6:1107082/145‑1 (MQ=255)

                                                                                            gCATATTGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGGCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGc                                                            <  1:1022979/151‑1 (MQ=255)

                                                                                               tatGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           >  8:1850029/1‑149 (MQ=255)

                                                                                                atGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGc                                                        >  3:1399656/1‑151 (MQ=255)

                                                                                                 tGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCACGCTAGcc                                                       >  4:169071/1‑151 (MQ=255)

                                                                                                  ggATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAGGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCg                                                      >  1:296679/1‑151 (MQ=255)

                                                                                                   gATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCgc                                                     >  4:33042/1‑150 (MQ=255)

                                                                                                      tCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGt                                                  >  4:1135353/1‑151 (MQ=255)

                                                                                                       cATCTGGCAATTATATACGGGTGAAATGCACTGGGGTTGGTCGGGGGGGGGGGTTTAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGATGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGt                                                  <  2:971280/150‑1 (MQ=255)

                                                                                                       aaTCTGGAAAATAAAAACGCGGGAAAAGCACTGGGCCGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCAGACGTa                                                 <  1:718141/150‑1 (MQ=255)

                                                                                                           tgcccaaTAAAACCGCGGCAATCCCACTGGTCAGCGGGGGGGGGGGGGGTATAATGACCTTTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAAt                                              <  5:1859236/145‑1 (MQ=255)

                                                                                                           tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATc                                             >  2:406486/1‑151 (MQ=255)

                                                                                                            ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGCCGTAAATcg                                            >  4:1497869/1‑151 (MQ=255)

                                                                                                            ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATcg                                            >  4:585744/1‑151 (MQ=255)

                                                                                                             gCAAATAAAAACGCGCGAAACGCCCTGGTCAGCGGCGGGGGTGGGGGGATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATcgc                                           <  6:1717057/151‑1 (MQ=255)

                                                                                                                 aTAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACCTAAATAGCGTTg                                       >  5:651731/1‑151 (MQ=255)

                                                                                                                 aTAAAAACGCGGGAAAAGCACTGGGCCGGGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTg                                       <  6:700543/151‑1 (MQ=255)

                                                                                                                  tAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTgg                                      >  7:1227091/1‑151 (MQ=255)

                                                                                                                     aaaCGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCtt                                   >  8:647014/1‑151 (MQ=255)

                                                                                                                      aaCGCGGTAAAACCACTGGGCAGCGTCGGTGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTg                                  <  8:1486804/151‑1 (MQ=255)

                                                                                                                         gcgGGACACGCCCTGGTCAGCGTGGGGGGGGGGGGAATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAgg                               <  1:564669/151‑1 (MQ=255)

                                                                                                                             gAAAACCACTGGTCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCa                           <  2:1712395/151‑1 (MQ=255)

                                                                                                                             caaacGCACTGGGCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCa                           <  4:1044421/150‑1 (MQ=255)

                                                                                                                              aaaaGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCa                           >  8:91229/1‑150 (MQ=255)

                                                                                                                               aaaGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAAt                         >  8:171482/1‑151 (MQ=255)

                                                                                                                                aaGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATc                        >  3:719106/1‑151 (MQ=255)

                                                                                                                                  gcccggggccgcggcgGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATcgc                      <  1:880013/141‑1 (MQ=255)

                                                                                                                                    aCTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCAGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCgcgc                    >  5:159201/1‑151 (MQ=255)

                                                                                                                                      tGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCg                  >  7:355965/1‑151 (MQ=255)

                                                                                                                                      tGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGGTGGCTTGAGGGGCAATCGCGCCg                  >  5:986061/1‑151 (MQ=255)

                                                                                                                                      ggggcAGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCg                  <  1:471932/147‑1 (MQ=255)

                                                                                                                                         tCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCTCCGaa                >  5:786736/1‑150 (MQ=255)

                                                                                                                                           aGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCCGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGaa                >  2:888113/1‑148 (MQ=255)

                                                                                                                                           aGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAat              >  2:1265697/1‑150 (MQ=255)

                                                                                                                                           aGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATAGCGTTGGCTTGAGGGGCAATCGCGCCGAAat              >  4:999161/1‑150 (MQ=255)

                                                                                                                                                 gggggtgggggtATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGt        >  8:1249238/1‑150 (MQ=255)

                                                                                                                                                      tgggggtATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGCAATATGCGTATCcac  >  8:312168/1‑151 (MQ=255)

CCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATCCAC  >  NC_000913/1308595‑1308895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`