Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC29.8% 280.6 / 71.6 251R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (121/51);  new base C (65/8);  total (188/63)
Fisher's exact test for biased strand distribution p-value = 1.73e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 257 total aligned reads displayed.

CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACA  >  NC_000913/1708753‑1709050
                                                                                                                                                    |                                                                                                                                                     
cagcacacgttgttgATCCTCGTAAAACGGCCGTCGAAGCCGCTATCTCACGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAAGAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGc                                                                                                                                                     <  8:336595/137‑1 (MQ=11)
cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTCTTGCCCGAGc                                                                                                                                                     >  7:419564/1‑151 (MQ=255)
    agaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAACCTGGAACAGCAAGCGGCTAATGCCGAGGGAGAAGAACAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGcc                                                                                                                                                    >  3:331839/1‑148 (MQ=11)
      aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCGAACGCACGCACGAGGGAACAGCAACCGGCTAATGCCGAGCCAGAAGACGAGGTCGATCCGCGCAAAGACGCCGTGGAAGCCCCTATTGCCCgcgcgcaggg                                                                                                                                               >  7:1855805/1‑145 (MQ=11)
               aTCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAACAACAGGTCGATCCGCGCAAAGCAGCACTCAAAACCGAAATTGACCGAAACAAAgagccaaaaat                                                                                                                                      >  8:226257/1‑144 (MQ=17)
                 ccccgcAAACCCGCCTTTTAACCAGCTATAGCCCGCTCCAAAGCTCGAAAGCTGGCACAGCAACTGCCTACTGCGGACCCAGCACAAGTTGCCGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGTGCAAACggg                                                                                                                                    <  4:418705/148‑1 (MQ=2)
                  cgcgCCCAGCCGCCGGCGCCGCCGCTCTCGCCCGCGCCACAGCCCGCAAGCTTGAACAGCAACAGGCTAATGCCTACCCAGAACACCAGGGCGACCCGAGCAAAGCCGCCGGCGATGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGa                                                                                                                                   <  1:1575702/151‑1 (MQ=255)
                    cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCGAACGCGCCCAAAcccgccc                                                                                                                                 >  6:289724/1‑145 (MQ=14)
                     gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGCCCGCGCCAACGCCCGAAAACCGGCAc                                                                                                                                 >  6:664113/1‑150 (MQ=14)
                      cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAGCaaccccgacc                                                                                                                                 >  3:246150/1‑141 (MQ=11)
                      cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGCCGCCGCTATTGCCCGCGCCAAAGCCCGAAACCgcgccc                                                                                                                                 >  2:394774/1‑144 (MQ=14)
                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTAGACGCGGCTATTGCCCGCGCCAACGCCAGCaaccccgcccagc                                                                                                                              >  4:1691951/1‑140 (MQ=14)
                        aacccgacgTCGAAGCCGCTATTGCCCGTGCCAAACCACGCAAGCTGGAACAGCAACAGGCTAATCCCGAGCCAGAACAACAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCa                                                                                                                             <  8:1691901/148‑1 (MQ=17)
                            cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGCGCACAAGCCCACAAACGCGAACAGCaca                                                                                                                           >  5:861956/1‑147 (MQ=14)
                              ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCCAGAAGATCAGGTCGAGCCGCGCCAGGACGCCGTCGACGGTGCTATTGCGCGAGCCACCGCTCGGCATGGCGAACAGCAACCggg                                                                                                                       >  1:1599645/1‑150 (MQ=2)
                              ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCAAACGCCAGCAAACGCGCCCAGCAACAGGc                                                                                                                       >  1:1452625/1‑151 (MQ=14)
                               cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGAGCCAGCACAACAGGTGGCTCCGCGCACAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCGCGCCAGCGGGacgagcggccgggg                                                                                                                      >  7:773996/1‑138 (MQ=11)
                               cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGCGCGAAAGCCCAAAAACCCGAACAGCAGCAGGCt                                                                                                                      >  8:1198501/1‑151 (MQ=14)
                                gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGATAATGACGAGAAAGCACAACATGTGGATCCGAGAAAAGCTGACGTCGCAGCCGCTATTGGAATATACAAAGCGCGCAAGCGGGACCAggagcgggcgt                                                                                                                     >  8:1851875/1‑141 (MQ=9)
                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAAtc                                                                                                                  >  4:547089/1‑150 (MQ=255)
                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGCGAACAGCacaaggcaaagg                                                                                                                  >  5:895858/1‑140 (MQ=14)
                                    cacccGCTACCGCCCCCGCCAAAGCCCGCAAGCTTGATAATCAACTTTCTTATGCCGACCCAGAACAACACTTCGATCCTCCCTAATCCGCATGACAACGCTCTTTTGATCTAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc                                                                                                                 <  8:1316765/148‑1 (MQ=255)
                                    aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCAACCGGCTCAtcc                                                                                                                 >  7:281628/1‑149 (MQ=17)
                                    aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCAGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCTAAAGCGAGCAAAGCGGACCAGCaccacgataaat                                                                                                                  >  6:1287076/1‑139 (MQ=14)
                                     aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGACCAGCACCCGGCTAATGCg                                                                                                                >  6:386950/1‑151 (MQ=255)
                                     aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGCAAGCGAGCAAGCTGGCACCGCCACCGGCTACTGCg                                                                                                                >  7:1290276/1‑151 (MQ=14)
                                     aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTGGACGCCGCTATTGCCCGCGCCAACGCGCGCAAAGGCGCCCAGCACCAGGCTGATGCg                                                                                                                >  7:582991/1‑151 (MQ=14)
                                            aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTCGCCGCGGCTATTGCCCGCGCGAACGCCAGCAAAGGCGCACAGCACCAGGCTGATGCGGAggc                                                                                                           >  7:194118/1‑147 (MQ=11)
                                                  cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCGCACGCCAGAAAACGCGCCCAGCACCAGGCTAATCCGGAGCCagaagagc                                                                                                   >  4:1190594/1‑149 (MQ=11)
                                                  cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCCGCGGCTATTGCCCGCGCGCACGCGCGCAAACGGGACCAGCAGCAGGCTGATGCGGAGCCagaaggcc                                                                                                   >  8:354020/1‑148 (MQ=14)
                                                          aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCGCGCAAAGGGGCACCGCAGCAGGGTATTGAGGAGGCAGACGAACAGGTTGAt                                                                                           >  7:913123/1‑151 (MQ=14)
                                                           gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCACAAGCCAAAAAAAGATAGCAACAGCCGCCTAATGCGGAACAATAAGACCAGGTTGAt                                                                                           >  2:836231/1‑150 (MQ=0)
                                                               gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCCAACGCGAGAAAACGGGACCAGCACAAGCCTAATGCGGAGCCAGAATCAGAGGTTGATTcgcc                                                                                      >  1:785558/1‑150 (MQ=14)
                                                                cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAATCGGGAACAGCAACCGGCTAGTGCGGAGGCGGACGCGGCGGTTGAGCCgcgc                                                                                     >  1:572808/1‑151 (MQ=14)
                                                                 aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCCCGAGCAAAAGCCATCAAACCCGACCAGCAACAGGCTAATGCCGAGCCAGAAGATCAGGTGGAACcgccg                                                                                     >  2:100764/1‑148 (MQ=9)
                                                                   gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAACGCGAGCAAACGGGAACAGCAGCAGGCTAATGCGGAGCCAGAAGATCAGGTTCATCCGCGCaa                                                                                   >  6:1091616/1‑150 (MQ=14)
                                                                   gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCCGCACGCGGGAGCAGCACGCGGCTAAGGAGGAGCAAGAAGCGCAGGGGGATCCGCGCaa                                                                                   >  4:931556/1‑150 (MQ=14)
                                                                       gAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCGGCTATTGCCCGCGCGAAGGCCACAAAACCCGCACAGCACCAGCCATCTGAGGAGCCACCAGCACAGCTGCATCCGCGCTAAGcgg                                                                              >  6:1667835/1‑149 (MQ=2)
                                                                         cccccaccccgCTAATGCCGACCCAGAATAATATTATTTTCAGCGCTACGACGCAGTCGAAGAGTCTATTGCACTCTCTATAGCACGAATACGGTAATAGGATCTGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCGGca                                                                            <  3:659295/141‑2 (MQ=2)
                                                                         aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAAGCACAGGTTGATCCGCGCAAAGCTGcc                                                                            >  6:1543878/1‑151 (MQ=255)
                                                                            ccAACAGGATAATGCCGAGCCAGAACAACAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc                                                                         <  4:317231/150‑1 (MQ=255)
                                                                                cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCgcac                                                                     >  7:1635190/1‑148 (MQ=255)
                                                                                cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCAAACGCCCGCAAACGCGAACAGCACCAGGCTAATGCGGTCCGAGAAGAACAGCTTGATCAGCGCAAAGCTGcagatgacg                                                                     >  2:437541/1‑143 (MQ=14)
                                                                                 actcTAATGACTAGGCAGAAGACCAGGTCGATCGTGTCATCTCCGCCGTCGTTGGCTCTTTTGCCCGAGCCAAAGCTCGCAATCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGc                                                                    <  4:39228/148‑1 (MQ=2)
                                                                                  ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGACCGAGCAAAAGCCAAAAAACCGGAACAGCACAAGGATATACCGGAGCCATAAGAACAGCTAGATCCGCCCAAAGATGCAGtttacgcg                                                                   >  1:250124/1‑144 (MQ=9)
                                                                                   gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCACAAGCCAGCAACCGGGAACACCAACAGGCTAATCCGGAACCAGAAGAACTCGTTGATCCGCGCACAGATGCAGTTGAAGcat                                                                  >  4:484151/1‑149 (MQ=14)
                                                                                      aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTAGCAGCGGCt                                                                >  2:1283108/1‑150 (MQ=255)
                                                                                      aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATAGCAAGAGCCAAAGCGCGCAAACGGGTACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTGGACGCgg                                                                  >  3:976603/1‑148 (MQ=17)
                                                                                       ccgcggAGCCTGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCCAGCCAAAGCGCGCAAAGCGGAACAGCAACCGGCTAATGGGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAt                                                              <  7:1689309/146‑1 (MQ=14)
                                                                                        tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAAACGCGAACAGCACCAGGATAATGAGGAGCCAGAACACAAGGTTGATCAGCGCAAAGCTGCCGTCGAAGCCGATAtt                                                             >  4:138826/1‑151 (MQ=14)
                                                                                         gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCCGCGGCTATTg                                                            >  3:1505518/1‑151 (MQ=255)
                                                                                         gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCACGAGACAAAGCCCGCAAACTGGAACATCAACAGGCTAAAGCGGTGCAAGAAGAACAGGTTGATACGCGAAAAGCTGCCGTAGACGCGGCTAt                                                              >  7:1825711/1‑149 (MQ=14)
                                                                                               ccAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGAGCGAAAGCCCACAAACACGAACAGCAACAGCCTAATGCAGAGCCAGAAGAACAGGTTGATACGAGCAAAGCGGCCGTCGCCGAGGCTAtttaaagcg                                                      >  2:1677694/1‑144 (MQ=2)
                                                                                               ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGACCCGGCTATTGCAcgcg                                                      >  6:1325504/1‑151 (MQ=14)
                                                                                               ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCcgcg                                                      >  8:503509/1‑151 (MQ=14)
                                                                                                    acaacaGGTCTATCCGCGCACACCCCCCCTCGACGCCGCTATTGCCCGCCCCCCAGCTCCCCACCGGGATCTTCAACCCTCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa                                                 <  7:1439873/151‑1 (MQ=16)
                                                                                                         aGGTCGATCCTATAAAAGCAGCCGTCGAAGCCGCTATTTCACTTTCATAAGCTCTCAAACGGTAACAGAATCTGTTTATTGCTGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg                                            <  5:1549563/151‑1 (MQ=16)
                                                                                                              gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAACGCACGaaaac                                       >  5:1776904/1‑149 (MQ=17)
                                                                                                               aTCCACGCAAACCCGCCGTTGAATCAGATATACCCCGACGCACAGCTCGCATACGGCAAAATGACCCTGGTTATGCGTAGGCTGAACATCAGCTCGATCCTCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                      <  6:771091/151‑1 (MQ=255)
                                                                                                                 gctccctcccccgcagACGACGCCGCTACCGCCCTAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg                                    <  6:93807/141‑1 (MQ=14)
                                                                                                                 ccccgcAAAGCCGCGGTTGAAGCCCCTATGCACCGGGCAAAAGCGCGCCAGGACGTAGAGCATCCGGCTTATGGGGCCGCAGAAGATCATGCTGATCCTCGCAAACCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTgg                                    <  6:1831133/148‑1 (MQ=255)
                                                                                                                 ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCACGCCCGCAAGCTgg                                    >  6:1179458/1‑151 (MQ=255)
                                                                                                                  cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAAAGCActaaaccacg                                    >  5:749648/1‑141 (MQ=14)
                                                                                                                  cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCTAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa                                          <  6:492827/144‑1 (MQ=255)
                                                                                                                  cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCTAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGAGGCTATTGCACGCGCCAAAGCACGCa                                          >  5:493139/1‑144 (MQ=255)
                                                                                                                  cccccAACGCCCCCGTCGAAGCCGCTATTGCCCGTTCCAAAGCTCGCAACCTGGAACAGCAACCGGCTAATGCGGAGCCAGAATAACAGCTTGATCCGCGCAAAGATGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGa                                   <  8:772510/147‑1 (MQ=14)
                                                                                                                   gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATcc                                                                                         <  1:143738/96‑1 (MQ=255)
                                                                                                                   ccccaccccggccgTCCCAGCCGCTATTGCCCGAGCCAAATTTTTTAATATGTAACAGCAACCGGCTATTGCGGACCCATTAGAAAATGTCTTTCCGATCAACTCTGGCTTCGCAGCTGCTATTGCACGCGCCAAAGCACGCAAGCTGGaa                                  <  2:690880/141‑1 (MQ=2)
                                                                                                                     gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCCACGCCCGCAACCtcgccc                                 >  6:1424636/1‑145 (MQ=17)
                                                                                                                     ccacaGCCGCCCGCGAAGCCGCTATTGCCCGAGCCAAATCTCTCAACCTGGACCAGCAACAGGCTAATGCGGAGCCAGAAGACCCGGTTGATCCGCGCAAAGCTGAGGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa                                <  1:1017585/147‑1 (MQ=14)
                                                                                                                         aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa                             >  4:896/1‑150 (MQ=255)
                                                                                                                         aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGTTGATCcgcataagccg                                                                               <  3:926529/100‑9 (MQ=17)
                                                                                                                         aGCCGCCGTCGAAGCCGCTATTGCCAGAGCCAAAGCGCGCAACCGGGAACATCAACCGTCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa                            <  8:1066186/151‑1 (MQ=255)
                                                                                                                          gccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGCCGCGGCTATTGCACGCGCGAACGCCAGCAAGCGCGACCAGCagc                           >  7:1140122/1‑149 (MQ=17)
                                                                                                                           ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGCacc                           >  1:1163868/1‑148 (MQ=255)
                                                                                                                           ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCaccc                          >  1:729806/1‑148 (MQ=255)
                                                                                                                            cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGACCAGCacc                           >  1:951587/1‑147 (MQ=255)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCGGGACCAGCAGCAgg                        >  8:941312/1‑151 (MQ=255)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGAAAGCTGGAACAGCAACAgg                        >  8:1597172/1‑151 (MQ=255)
                                                                                                                              ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGc                       >  1:1863225/1‑151 (MQ=255)
                                                                                                                               cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCAACAGGCt                      >  7:1488116/1‑151 (MQ=255)
                                                                                                                                gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCGAAAGCACGCAAGCTGGACCAGCAACAGGCt                      >  5:228272/1‑150 (MQ=255)
                                                                                                                                gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCt                      >  7:1177565/1‑150 (MQ=255)
                                                                                                                                cccccacccGCCACTGCCCCACCCAAAGCGCGCAATCTGGAACAGCAACACGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTTCAGTTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTa                     <  5:602241/144‑1 (MQ=11)
                                                                                                                                 tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCAAGAAAACAGGAACAGCAAAAGGATa                     >  3:1751672/1‑150 (MQ=21)
                                                                                                                                  cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGCACAGCACCAGGCTAAt                   >  3:1383595/1‑151 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg                  >  2:97823/1‑151 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCACGACCAGCAACAGGATaa                    >  2:637383/1‑149 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGCAACAGGCTaa                    >  4:1594112/1‑149 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCTCGAACAGCAACAGGCTAATg                  >  6:788780/1‑151 (MQ=255)
                                                                                                                                    aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCATCAGGCTAATGc                 >  7:339552/1‑151 (MQ=255)
                                                                                                                                     aGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCg                >  6:275536/1‑151 (MQ=255)
                                                                                                                                          cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAACGCCCGCAAGCTGGCACAGCACCAGGCTAATGCGGTagc           >  6:960555/1‑149 (MQ=25)
                                                                                                                                               gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGCACAGCACCAGGCTAATGCGGTACCaga        >  5:124895/1‑149 (MQ=255)
                                                                                                                                                cccGAGCCAAAGCGCGCAAACGGGAGCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCaga        >  6:640522/1‑148 (MQ=255)
                                                                                                                                                cccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGAAAGCACGCAACCTGGAACAGCAACAGGCTATTGCGGTTCCaga        >  3:365272/1‑148 (MQ=255)
                                                                                                                                                 ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGCCCAGCACCAGGCTAATGCGGTACCagaaga     >  8:1449858/1‑150 (MQ=255)
                                                                                                                                                   gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc   >  5:1527245/1‑150 (MQ=255)
                                                                                                                                                    aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGCACAGCACCAGGCTAATGCGGTGGCagaagcgc   >  2:1238721/1‑146 (MQ=25)
                                                                                                                                                    aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAGGCAAGCAAGGTCGAACAGCAGCAGGCTATAGCGGTTGCagaagagg   >  3:1119399/1‑147 (MQ=21)
                                                                                                                                                    |                                                                                                                                                     
CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACA  >  NC_000913/1708753‑1709050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑