Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9300CA27.9% 499.2 / 76.4 267P671Q (CCG→CAG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (146/43);  new base A (59/14);  total (206/61)
Fisher's exact test for biased strand distribution p-value = 6.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 275 total aligned reads displayed.

CCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708780‑1709080
                                                                                                                                                       |                                                                                                                                                      
cccccctcccaGCCGCTATCGCCCGCGCCAAAGATTTTTATATGTAACTGCAACACGCTATTGCTTAACCATTACCACACGTCTTTCCGTCCAATCCGGTCTTCGCAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAAcc                                                                                                                                                        <  3:1488026/141‑1 (MQ=255)
   ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCC‑GCGCAAACGCCAGCAAACGCGCCCAGCAACAGGc                                                                                                                                                     >  1:1452625/1‑151 (MQ=14)
    cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCC‑GCGCGAAAGCCCAAAAACCCGAACAGCAGCAGGCt                                                                                                                                                    >  8:1198501/1‑151 (MQ=14)
    cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCC‑GCGCACAAGCCAGCAAACCCGACCAGCAGCAGGCt                                                                                                                                                    >  3:883315/1‑151 (MQ=14)
     gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCAC‑GAGCCAAAGCGCGCAAGCGGGAACAGCATCGGGcgc                                                                                                                                                   >  6:219023/1‑149 (MQ=14)
      ccccacccgcgcccgCCCGCGCCACAGCTCTCAAGCTGCAACAGCACCACGCTCATCCCGAGGCAGCTGACGCGCGCGCTCAGGGCACAGCCTCCGAGGAAGCCGCTATCGCCC‑GCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTaa                                                                                                                                                  <  7:1606430/137‑1 (MQ=9)
        caccccGCAATCGCCCTCGACAAAGCTCGCATGAGGTCACACCAACTGGCTAACGATGACCCAGAACAAGATGCCGATCCTCGCAAACCCGCCGTCGAAGCAGCTATCGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATg                                                                                                                                                <  6:162339/147‑1 (MQ=255)
         cacccGCTACCGCCCCCGCCAAAGCCCGCAAGCTTGATAATCAACTTTCTTATGCCGACCCAGAACAACACTTCGATCCTCCCTAATCCGCATGACAACGCTCTTTTGATC‑TAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc                                                                                                                                               <  8:1316765/148‑1 (MQ=255)
         aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCAC‑GCGCAAAAGCCACAAAACGCGAACAGCAACACGCTaaaa                                                                                                                                                >  8:188102/1‑148 (MQ=14)
          aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCC‑GCGCCAACGCGCGCAAACGGGACCAGCACCCGGCTAATGCg                                                                                                                                              >  6:386950/1‑151 (MQ=255)
          aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GCGCGCAAGCGAGCAAGCTGGCACCGCCACCGGCTACTGCg                                                                                                                                              >  7:1290276/1‑151 (MQ=14)
            ccGCTATAGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCGAATGCCGATCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa                                                                                                                                            <  1:530628/151‑1 (MQ=255)
             cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCC‑GAGCAAAAGCCAAAAAACCCGAACAGCAAAAGGATAAtaacgac                                                                                                                                           >  5:775622/1‑145 (MQ=14)
              ccTATCGCCCGCGCCAAATATCTAAAGATTGAACAGCAACAGTCTAATCCCGATCCAGAACAACAGTTCGATACGAGGAATGTCTTCGTATAAGCAGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc                                                                                                                                          <  8:53657/150‑1 (MQ=255)
                 aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTCGCCGCGGCTATTGCCC‑GCGCGAACGCCAGCAAAGGCGCACAGCACCAGGCTGATGCGGAggc                                                                                                                                         >  7:194118/1‑147 (MQ=11)
                     cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGCCGCCGCTATTGCCC‑GCGCCAACGCCCGCAAAGGGGAACAGCACCAGGCTAATGCGGAGCCcga                                                                                                                                      >  7:779542/1‑148 (MQ=14)
                               aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCC‑GCGCCCAAGCGCGCAAAGGGGCACCGCAGCAGGGTATTGAGGAGGCAGACGAACAGGTTGAt                                                                                                                         >  7:913123/1‑151 (MQ=14)
                                 cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCC‑GCGCCCAAGCCAGCAAACCCGAACAGCAGCAGGGTCAAGCGGAGGCCGAAGAGCACGTAGCTcc                                                                                                                       >  5:24564/1‑151 (MQ=2)
                                  aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGAGC‑TCGGAAAAGCGAGCACTAGGGAAAAGCAAACGGCTAATGGGTAGCGAGAAGAGCAgggagatac                                                                                                                       >  8:42402/1‑143 (MQ=9)
                                   cGCAATCTGGAACAGCAACATGCTAATGCTGATCCAGAACAACACGTCGATCCGCGCAATGCCGCCTTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcg                                                                                                                      <  5:617660/150‑1 (MQ=18)
                                    gCAAGCTTCATCATCAACAGTCTAATCCGGAGCGATACCCAGATGGCGATCCTCGCAAAGCCGCCGTCGAAGCAGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcgcg                                                                                                                    <  1:222978/151‑1 (MQ=17)
                                    gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCC‑GCGCCAACGCGAGAAAACGGGACCAGCACAAGCCTAATGCGGAGCCAGAATCAGAGGTTGATTcgcc                                                                                                                    >  1:785558/1‑150 (MQ=14)
                                     cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCACGCAATCGGGAACAGCAACCGGCTAGTGCGGAGGCGGACGCGGCGGTTGAGCCgcgc                                                                                                                   >  1:572808/1‑151 (MQ=14)
                                        gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCC‑GAGCCAACGCGAGCAAACGGGAACAGCAGCAGGCTAATGCGGAGCCAGAAGATCAGGTTCATCCGCGCaa                                                                                                                 >  6:1091616/1‑150 (MQ=14)
                                            gAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCAC‑GAGCCAAAGCTCGCAAACGGGAACAGCAAAAGGCTAATGCGGAGCCAGAAGAAGAGGTTGATCCGCGCGAGGCTg                                                                                                            >  5:585545/1‑151 (MQ=14)
                                                  cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGACGCCGCTATTGCCC‑GCGCCAACGCGCGCAAACCGGAACAGCAACAGGCTAAAGCGGAGCAAGAAGAGCAGGTTCCACCGCGCAGAGCGGCCGtgg                                                                                                      >  6:452085/1‑149 (MQ=14)
                                                   aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GCGCGCAAGCGCGAAAACGGGACCAGCAACCGGCTCATGCGGAGCCAGAAGAACAGGTTGCTCAGCGCAACGCTGGCGTCgc                                                                                                     >  6:1368353/1‑150 (MQ=17)
                                                     cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GCGCGAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGCTCAGCGCACAGCGGCAGTCGa                                                                                                     >  5:1181125/1‑149 (MQ=14)
                                                     cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCC‑GCGCAAACGCCCGCAAACGCGAACAGCACCAGGCTAATGCGGTCCGAGAAGAACAGCTTGATCAGCGCAAAGCTGcagatgacg                                                                                                   >  2:437541/1‑143 (MQ=14)
                                                          tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCAC‑GCGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCACAGAAGCCTCCCGTCGacgaggg                                                                                               >  8:872733/1‑144 (MQ=11)
                                                           aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTAGCAGCGGCt                                                                                              >  2:1283108/1‑150 (MQ=255)
                                                           aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATAGCAA‑GAGCCAAAGCGCGCAAACGGGTACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTGGACGCgg                                                                                                >  3:976603/1‑148 (MQ=17)
                                                            ccgcggAGCCTGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCC‑CAGCCAAAGCGCGCAAAGCGGAACAGCAACCGGCTAATGGGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAt                                                                                            <  7:1689309/146‑1 (MQ=14)
                                                            aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGACCAGGTGGCTCCGCGAACAGCTGCCGTAGAAGAGCCTAt                                                                                            >  7:392179/1‑151 (MQ=14)
                                                             tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt                                                                                           >  1:1858707/1‑151 (MQ=255)
                                                              gcggaaccAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCGGCTATTGCCCAGAG‑CAAAACACCCAAGCTGAAACAAAAACAGGCTAATGATGTGGAAGAAGAACAGGTAGATCGGAGCAAAAAAGAAGTAGACGCGGCTATTg                                                                                          >  3:251103/7‑151 (MQ=2)
                                                                  aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAACGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCcg                                                                                      >  4:1425189/1‑151 (MQ=255)
                                                                  aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGAGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTg                                                                                          >  6:660120/1‑147 (MQ=255)
                                                                    ccAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCC‑GAGCGAAAGCCCACAAACACGAACAGCAACAGCCTAATGCAGAGCCAGAAGAACAGGTTGATACGAGCAAAGCGGCCGTCGCCGAGGCTAtttaaagcg                                                                                    >  2:1677694/1‑144 (MQ=2)
                                                                     cAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGCACAGGTTGATCCGCGCAAAGCAGCCGTCGCAGCTGCGATTCCCCgcgc                                                                                   >  1:998273/1‑151 (MQ=14)
                                                                      aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGTCCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCCGCGGCTATTGcgcgcggc                                                                                  >  6:1324923/1‑149 (MQ=14)
                                                                         acaacaGGTCTATCCGCGCACACCCCCCCTCGACGCCGCTATTGCCC‑GCCCCCCAGCTCCCCACCGGGATCTTCAACCCTCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa                                                                               <  7:1439873/151‑1 (MQ=16)
                                                                                 ccGATCCGCGCAACGCCGCCTTCTAAGCCGCTATTGCCC‑TCGCCATAGAGCTCAACATTGACCAGCAACCTTCTAATTCTGTTCCAGATGAAGATGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa                                                                       <  2:682957/150‑1 (MQ=255)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCAAACGCAAGAAAggg                                                                    >  8:1595498/1‑149 (MQ=17)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGCCGCAGAAGACCAGCGTGCTCCCCGCAAGGCTCCCTTCTCGGCGTCTAATGCACGCGGCagcgcccaaaagc                                                                     >  7:1148211/1‑138 (MQ=9)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCACTCAAGCt                                                                    >  1:1160416/1‑151 (MQ=255)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                                                    >  8:1684705/1‑151 (MQ=255)
                                                                                    aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCCCGCGCAAAGGccagaaagcg                                                                    >  3:1077273/1‑142 (MQ=17)
                                                                                    aTCCACGCAAACCCGCCGTTGAATCAGATATACCCC‑GACGCACAGCTCGCATACGGCAAAATGACCCTGGTTATGCGTAGGCTGAACATCAGCTCGATCCTCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                                                    <  6:771091/151‑1 (MQ=255)
                                                                                     tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCAC‑GAGCCAAAGCCCCCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGCTTGATCCGCGCAAAGCTCCCGTCGGAGAGCCTATTCCACGCGCCacggcaagaaagggc                                                                   >  4:635594/1‑137 (MQ=17)
                                                                                      gctccctcccccgcagACGACGCCGCTACCGCCC‑TAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg                                                                  <  6:93807/141‑1 (MQ=14)
                                                                                      ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCACGCCCGCAAGCTgg                                                                  >  6:1179458/1‑151 (MQ=255)
                                                                                          gcaaccccgccgTCGAAGCCGCTATTGCCC‑GAGCCAAATCGCGCAATCGGGAACAGCAACCGGCTAATGCCGAGACAGAAGAACAGTTGGATACGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa                                                              <  5:219245/145‑1 (MQ=17)
                                                                                          gcaaccccgccgGCGAAGCCGCTATTGCCC‑GAGCCAAATCTCGCAAACTGGAACAGCAACCGGCTAATGCTGAGCCAGAAGAACAGCGAGATCCGCTCAAAGCAGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa                                                              <  7:1855348/145‑1 (MQ=14)
                                                                                          ccacaGCCGCCCGCGAAGCCGCTATTGCCC‑GAGCCAAATCTCTCAACCTGGACCAGCAACAGGCTAATGCGGAGCCAGAAGACCCGGTTGATCCGCGCAAAGCTGAGGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa                                                              <  1:1017585/147‑1 (MQ=14)
                                                                                           cAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCaaccaggcac                                                               >  1:1420978/1‑141 (MQ=255)
                                                                                           cAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGAGCGCAAACGGGAACAGAAACAGGCTAATGAGGACCCAGAAGAACAGGTCGATCAGCGCAAAGCAGCCGTCGAAGCAGCTATTGCCCGCGCCAAAgcgcgcgggcgggcggcg                                                             >  5:883732/1‑139 (MQ=11)
                                                                                              aGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCTGCTATTGCCCGCGCCAAAGCAAGCAACCTCGAACAGCa                                                           >  6:984558/1‑150 (MQ=255)
                                                                                              aGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa                                                           >  4:896/1‑150 (MQ=255)
                                                                                                 cgccgccgccgcCCCTATAGCCC‑CCGCCAAAGCGCGCAATCTGTAACAGCACCAGCCTAATGCCGAGCCAGACGAACCTGTCTCTACGCCACAAGCTGCCGGCTAAGAGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAg                                                       <  7:1771591/151‑1 (MQ=2)
                                                                                                  gccgTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGTTCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg                                                      >  1:1574872/1‑151 (MQ=255)
                                                                                                    cgTCGACGCCGCAATTGCCC‑GTTCCAAACCACGCCAAGTGGAACACCTACCGGGTAATCCGTCCCCAGACTAAATCCGTGTTCCGCTCATAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt                                                    <  4:452516/151‑1 (MQ=9)
                                                                                                    cctCGAAGCCGCTACACCCC‑GAGCCACAGCGCGCAAACGGGAACAGCAACAGGCTAATGCTGAGCCAGAAGAACAGGTTGATCCTCGCAAAGCTGCCGTCGAATCGGCTATTGCACGCGCCAAAGCACTCAAGCTGGAACAGCAACAGGCt                                                    <  2:571853/149‑1 (MQ=17)
                                                                                                     gTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCt                                                    >  7:1177565/1‑150 (MQ=255)
                                                                                                     gTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt                                                    >  7:1489037/1‑150 (MQ=255)
                                                                                                      tCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTa                                                   >  4:1089913/1‑150 (MQ=255)
                                                                                                        gAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATg                                                >  8:348731/1‑151 (MQ=255)
                                                                                                        gAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg                                                >  2:97823/1‑151 (MQ=255)
                                                                                                        gAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCACGAACAGCAACAGGGTAAt                                                 >  3:1553651/1‑150 (MQ=255)
                                                                                                        gAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCTCGAACAGCAACAGGCTAATg                                                >  6:788780/1‑151 (MQ=255)
                                                                                                         aaGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCATCAGGCTAATGc                                               >  7:339552/1‑151 (MQ=255)
                                                                                                         aaGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCTGGAACAGCAACAGGCTCATGc                                               >  4:364840/1‑151 (MQ=255)
                                                                                                                    gCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGCACAGCACCAGGCTAATGCGGTACCaga                                      >  5:124895/1‑149 (MQ=255)
                                                                                                                     ccc‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCaga                                      >  4:277250/1‑148 (MQ=255)
                                                                                                                     ccc‑GAGCCAAACCGCGCAAACCGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaaga                                   <  6:585518/151‑1 (MQ=255)
                                                                                                                     aac‑GAGCCAAAGCCCTCAAACTGGAACAGCAACAGGCTAATGCTGAGCCAGAAGAACAGGTTTATCAGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaaga                                   <  3:498704/149‑1 (MQ=14)
                                                                                                                      cc‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGCCCAGCACCAGGCTAATGCGGTACCagaaga                                   >  8:1449858/1‑150 (MQ=255)
                                                                                                                         gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc                                 >  5:1527245/1‑150 (MQ=255)
                                                                                                                         gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc                                 >  6:1524090/1‑150 (MQ=255)
                                                                                                                              aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCACCAGGCTAATGCGGTACCAGAAGAACAGGTTg                           >  1:92478/1‑151 (MQ=255)
                                                                                                                              aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTg                           >  2:1485279/1‑151 (MQ=255)
                                                                                                                               aaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACACGTTg                           >  4:504089/1‑150 (MQ=255)
                                                                                                                                 gcgcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCACCAGGCTAATCCGGAACCAGAAGAACAGGTTgct                         >  4:976668/1‑148 (MQ=18)
                                                                                                                                    cgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGAGGTACCAGAAGAACAGGTTGATCcgc                     >  1:712284/1‑151 (MQ=255)
                                                                                                                                     gcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCACACGCACGCAAGCACGACCAGCACCAGGCTAATGACGTAGCAGAAGAACAGCTTGATCcgcc                    >  5:334940/1‑150 (MQ=21)
                                                                                                                                       aagctggAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAg                                                                                                   <  5:99047/65‑1 (MQ=11)
                                                                                                                                       aaaCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc                   >  1:1629441/1‑150 (MQ=255)
                                                                                                                                         aCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCac                 >  4:1281100/1‑149 (MQ=255)
                                                                                                                                           gggAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGAACAGGTTGATCCGCGCAAAGc              >  4:1599806/1‑151 (MQ=255)
                                                                                                                                             gAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCgg            >  2:107269/1‑151 (MQ=255)
                                                                                                                                             gAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGCTCCGCGCAAAGCgg            >  3:1177124/1‑151 (MQ=255)
                                                                                                                                              aaCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCAGCGCAGAGCGGc           >  2:353616/1‑151 (MQ=255)
                                                                                                                                               aCAGCACCCGGCTAATGCGCAGCCAGACCAACCGCTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCa          <  6:1737405/151‑1 (MQ=14)
                                                                                                                                               aCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGACCAGGTTGATCCGCGCAAAGCGGc           >  3:1809137/1‑150 (MQ=255)
                                                                                                                                                cAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGc           >  5:1592642/1‑149 (MQ=255)
                                                                                                                                                cAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCCAGGCACGCAACCTGGAACAGCACAAGGCTAAAGCCGAACCAGAAGACCAACATGATCCGCGGAAAGCGGCac         >  2:783507/1‑150 (MQ=21)
                                                                                                                                                 aGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGt        >  7:627358/1‑151 (MQ=255)
                                                                                                                                                     aCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCGCGACCAGCAACAGGATAATACGGAACCATAACAACAGTTTGAACAGCGCAACGCCGCAGTTccc    >  8:1123094/1‑151 (MQ=25)
                                                                                                                                                      ccGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGACCAGGTTGATCCGCGCACAGCGGCAGATGccc   >  8:1171527/1‑150 (MQ=255)
                                                                                                                                                       cGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCcgc  >  7:970663/1‑151 (MQ=255)
                                                                                                                                                       |                                                                                                                                                      
CCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCC‑GAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708780‑1709080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑