Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,4650T.24.2% 479.7 / 162.1 189intergenic (+2/‑32)metZ/metWtRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base T (30/111);  new base . (4/41);  total (34/155)
Fisher's exact test for biased strand distribution p-value = 7.62e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.87e-01

Only 100 of 201 total aligned reads displayed.

GCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGG  >  NC_000913/2947316‑2947613
                                                                                                                                                     |                                                                                                                                                      
gCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGATAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       <  5:913570/151‑1 (MQ=255)
gCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACNCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       <  6:927743/151‑1 (MQ=255)
gCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       >  6:604727/1‑151 (MQ=255)
gCCAAATCCGTGATCGGGGTAAAAAAAAGCTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       <  3:1334431/151‑1 (MQ=255)
 cctaaTGCGTTATCGTGTTAAAATTAAGGTTGCATGAAAAATAGAGGTTTGTATAGTGCGAATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                      <  3:678676/148‑1 (MQ=14)
 ccAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                      <  8:1700290/151‑1 (MQ=255)
 atcaaTCCGGGATCGGGGTAAACAAACGGTTGCATGAAAACGCGAGCGGAGTATACTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCACCCAATTa                                                                                                                                                      <  4:1546318/148‑1 (MQ=21)
  cAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtaa                                                                                                                                                      >  2:845724/1‑148 (MQ=255)
  cAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTat                                                                                                                                                     >  3:577907/1‑150 (MQ=255)
  cAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaa                                                                                                                                                     <  6:813519/151‑1 (MQ=255)
  cAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaa                                                                                                                                                     <  7:1262832/151‑1 (MQ=255)
    aaTGCGTGATGGGGTTAAAAACAACGCTCAATGAAAACGCGAGAGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaat                                                                                                                                                   <  7:1804374/151‑2 (MQ=17)
    aaTCTGTGATCTTGTTATAATAAAGGTTGAATGAAATATCTAGGTTAGTATATTTCGATTACTCTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATATCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                                   <  5:604662/151‑4 (MQ=2)
    aaTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                                   >  1:1009091/1‑148 (MQ=255)
     aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                                   >  4:986377/1‑147 (MQ=255)
     aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                                  <  1:1695953/151‑1 (MQ=255)
     aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                                  <  7:229604/151‑1 (MQ=255)
     aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaatt                                                                                                                                                  >  5:358421/1‑149 (MQ=255)
       gcGTGATCGGGGTAAAATTAAGGTTGCATGAAATCGCGAGCGGAGTATAGTGCGCTTCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGTCCCCGCAACCAATCAAAttt                                                                                                                                                 <  5:1397494/149‑1 (MQ=18)
       ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                                 <  7:515891/150‑1 (MQ=255)
       ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                                 <  2:1506615/150‑1 (MQ=255)
        ggttaTCTGGTTAAAAATAAGGTTGCATGAAATATAGTGTGTAGTATTGTGCGCATACAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtga                                                                                                                                              <  8:451236/147‑1 (MQ=11)
         gggagcgtgcaaaaacaaaGGTTGCATGAAATCCCCTGCGGAGTATAGTGCGCTTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                                             <  5:692866/140‑1 (MQ=14)
         gTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaca                                                                                                                                               >  3:1098512/1‑143 (MQ=255)
         gTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtga                                                                                                                                              <  7:120317/151‑1 (MQ=255)
           gATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgat                                                                                                                                             <  3:888587/150‑1 (MQ=255)
           gATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAAACCGAAGGACGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TAAAATTtga                                                                                                                                              >  6:563370/1‑148 (MQ=255)
            aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatg‑a                                                                                                                                          <  8:1252236/151‑1 (MQ=255)
            aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatg‑a                                                                                                                                          <  7:92778/151‑1 (MQ=255)
            aTCGGGGAAAAATACAGGGTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccct                                                                                                                                           <  7:839504/151‑12 (MQ=17)
              ctggttAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       <  8:1450784/132‑1 (MQ=255)
              cGGGGTAAAAAACAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTat                                                                                                                                                     <  4:447776/139‑2 (MQ=255)
              cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCACATCCGGCCCCCGCAACCAATTacatgggaagagcc                                                                                                                                         >  1:280065/1‑138 (MQ=255)
              cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacacccta                                                                                                                                          >  2:155758/1‑138 (MQ=255)
              cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTat                                                                                                                                                     >  3:447584/1‑138 (MQ=255)
              cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAg                                                                                                                                        <  1:1232887/151‑1 (MQ=255)
               gggtTAAAAAAAAGGTTGCATGAAATATCTAGCGTAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑a                                                                                                                                     <  2:190021/151‑1 (MQ=17)
               gggtTAAAAAAAAGGGTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccctaac                                                                                                                                        <  1:1220079/151‑15 (MQ=17)
               ggggTAAAAAAAAGGTTGCATGAAAAAGCGAGCGGAGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCCATTattgaacaccctaac                                                                                                                                        <  1:1497273/151‑15 (MQ=17)
                gggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGGATCCACGGACGCGGGGTGGAGCAGCCTGGGAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑a                                                                                                                                     <  1:482728/151‑1 (MQ=255)
                 ggTAAAAAAAAGGGTGCATGAAAACGCGAGCGGAGTATACTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaa                                                                                                                                   <  4:1202707/151‑1 (MQ=18)
                  gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑aaa                                                                                                                                   <  7:731604/151‑1 (MQ=255)
                  gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑aaa                                                                                                                                   <  4:898669/151‑1 (MQ=255)
                   tAAAAAAACGGGTGCAGGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTat                                                                                                                                                     <  1:349522/134‑2 (MQ=255)
                   tAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaaagataggaagagcgt                                                                                                                                      >  2:348592/1‑135 (MQ=255)
                   tAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGGGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑aaa                                                                                                                                   <  6:503709/150‑1 (MQ=255)
                    aaaataaaGGGTGAATGAAAACGCTAGCGGAGTATAGTCCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaaag                                                                                                                                 <  7:1577500/150‑3 (MQ=17)
                    aaaaatcaggcgccATGAAAAAGCGAGCGGAGAATAGTGCGCATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaaag                                                                                                                                 <  4:131417/137‑3 (MQ=14)
                    aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGc                                                                                                                                 <  1:820042/151‑1 (MQ=255)
                     atatccaGGTGGCATGAATAAGAGTTCGGAGTATAGTTGGCTTCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaaagca                                                                                                                               <  3:957780/145‑5 (MQ=11)
                     aaaccacgggggCAGGAAAACCCGAGCGCAGTATAGTGCGCATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaaagca                                                                                                                               <  6:1006755/140‑5 (MQ=14)
                      aatcaaGGTTGCATGAAAACGATAGTGTAGTATAGTGGGAATCCTCTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaaagcag                                                                                                                              <  6:1139321/147‑6 (MQ=11)
                      aaataaGGTTGCATGAAAAAGCGATCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       <  8:303859/129‑1 (MQ=255)
                      aaataaGGTTGAATGAAAACCATAGCGTAGTATAGTCGGAATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGT‑aaaagcag                                                                                                                              <  5:1207617/151‑6 (MQ=11)
                      aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCATCCTGGTAGCTCGTCGGGCTCATAACCAGAAGGTCGTCGGTTCAAATACGGACCCCGCAACCAATTAAAATTTAATG‑AAGT‑AAAGc                                                                                                                                 >  5:1839480/1‑149 (MQ=255)
                      aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                       >  7:304306/1‑129 (MQ=255)
                      aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAg                                                                                                                               <  2:1607006/151‑1 (MQ=255)
                       acacaGGGTGCACCAAAAAGCCAGCGGAGTATAGAGCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGt                                                                                                                              <  6:30670/147‑1 (MQ=11)
                       aaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGt                                                                                                                              <  3:1518160/151‑1 (MQ=255)
                       aaaaaGGGTGCATCAAAACTCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAt                                                                                                                                                        <  4:294468/127‑1 (MQ=255)
                        aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTa                                                                                                                             <  4:65022/151‑1 (MQ=255)
                         aaaGGTGGAATGAAATAGAGTGCGTAGTATAGTGCGCCTCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTAc                                                                                                                            <  6:1482447/151‑1 (MQ=11)
                         aaaGGGTGCAGGAAAAAGCGAGCGCAGTATAGTCCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTAc                                                                                                                            <  4:255631/151‑1 (MQ=14)
                          cggggtgaaTGAAAAACCGAGCGCAGTATAGTCGGAATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACg                                                                                                                           <  7:364046/143‑1 (MQ=1)
                          aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaaaaactaac                                                                                                                                        >  8:335354/1‑126 (MQ=255)
                          aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACg                                                                                                                           <  5:207244/151‑1 (MQ=255)
                          aaGGTTGCATGAAAAAGCGATGGGAGTATACTCCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACg                                                                                                                           <  5:1517456/151‑1 (MQ=11)
                          aaGGTTCAATGAAAAATCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACg                                                                                                                           <  4:1388904/151‑1 (MQ=14)
                           aGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACgg                                                                                                                          <  6:965866/151‑1 (MQ=255)
                           aGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACgg                                                                                                                          <  8:928552/151‑1 (MQ=255)
                            ggTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacacccta                                                                                                                                          >  4:1867948/1‑124 (MQ=255)
                            ggTTGAATGAAATCTCTAGCGGTGTATATTGCGAATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACGGt                                                                                                                         <  5:519891/151‑1 (MQ=11)
                             ggtGCAGGAATACGCGTGCGGAGTATAGTCCGCCTCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACGGTg                                                                                                                        <  1:951649/149‑1 (MQ=11)
                               tGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaacca                                                                                                                                           >  8:261393/1‑121 (MQ=255)
                                caaggAAAAAGCCATCGGAGAATAGAGCCCATACACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACGGTGAcg                                                                                                                     <  5:1681917/147‑1 (MQ=11)
                                 cATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGAcgc                                                                                                                    <  3:822277/151‑1 (MQ=255)
                                  atgaaatacagagaGGAGTATAGACCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACGGTGAcgcg                                                                                                                   <  6:1175522/141‑1 (MQ=11)
                                  aTGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGAcgcg                                                                                                                   <  3:273572/151‑1 (MQ=255)
                                  aTGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGAcgcg                                                                                                                   <  5:370604/151‑1 (MQ=255)
                                  aTGAAAACGAGATCGTAGTATATTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTACGGTGAcgcg                                                                                                                   <  7:1609489/151‑1 (MQ=11)
                                   tGAAAACGCGAGCTGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaca                                                                                                                                               <  4:378501/124‑8 (MQ=255)
                                    gNAAACGCGAGNGGAGTATANTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCggg                                                                                                                 <  2:1278744/151‑1 (MQ=255)
                                    gAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCggg                                                                                                                 <  1:1821194/151‑1 (MQ=255)
                                      aaaCGGGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCTGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCGGGGt                                                                                                               <  4:547266/151‑1 (MQ=255)
                                       aaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAg                                                                                                                                        >  8:114934/1‑125 (MQ=255)
                                        aCGCGAGCGGAGTATAGAGCGCATCCACTGACGCGGTGTGGAGGAGCCTGGTAGCTCGTCGGGCTCATATCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAAGCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCGGGGTgg                                                                                                             <  6:1573104/151‑1 (MQ=18)
                                         cgcgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCGGGGTGGa                                                                                                            <  5:1726649/151‑1 (MQ=255)
                                         cccgAGCGGAGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCTGTTCAAATCCGGCCCCCGCAACCAA‑TAAAATTTGTTGTAATA‑AAAGCAGTACGGTGACGCGGGGTGGa                                                                                                            <  6:1840231/149‑1 (MQ=14)
                                            gAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaca                                                                                                                                               <  4:178869/115‑8 (MQ=255)
                                            gAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaca                                                                                                                                               >  3:178980/1‑108 (MQ=255)
                                             aggggAGTATAGTGAGCATCCACGGACGCGCGTTGGAGCAGGCTTGTAGCTCGTCGGTCTCATAACCCGAAGGTCTGAGGTTCAAATCCGGCCCCCGCAACCAAATAAAAATTGATG‑AAGT‑AAAGCAGTACTGTGACGCGGGGTGGagcag                                                                                                        <  3:652103/148‑1 (MQ=17)
                                              gCGGAGTATACTCAGCTTCTACGGACTCCGGTTGGAGCAGCCTTTTATCTTGTCTGTCTCATATGCCGAAGGGCGTCGGTTCATATAATACCCGCGGAACCAAATAAATTTTGTTG‑AAGT‑TAAGCATTACGGTGACGCGGGGTGGagcagc                                                                                                       <  2:1537261/151‑1 (MQ=9)
                                                cgAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaatgaa                                                                                                                                                 >  6:38615/2‑105 (MQ=255)
                                                 gAGTTTAGTCCCAATCCACGGACTCGGGGTGGAGAAGCGTGGTTGGTGGTCGGTCTAATAACCCTAAGGGCGTCGGTTCAAAACCGGCCCCCGCAACCAATTAAAATTTGATG‑AATT‑AAACCAGTACGGTGACGCGGGGTGGAGCAGCCTg                                                                                                    <  1:577382/151‑1 (MQ=14)
                                                    tataGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTAAT‑‑AAGTAAAAGCAGTAc                                                                                                                            >  5:1474654/1‑124 (MQ=14)
                                                    tataGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATG‑AAGTAAAAGCAGTAc                                                                                                                            <  6:1475116/124‑1 (MQ=11)
                                                                       accgGTGTGGAGTAGGGTGGTTGGTCGGCGGGATAACAACCCGAAGGGCGGCTGTGGAAATCAGCCCCCCTGAACCAATAAAATATTGCAG‑TAGT‑CACCCAGTACGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAAcc                                                                              <  7:675114/149‑1 (MQ=2)
                                                                           gggTGGAGCAGGCTTGTAGCTCGGCTGTCTCATAACGCGAAGGTCGTCGGTTCAAATCCGGCCGCCGGAACCAATTAAAATTTGATG‑AAGT‑AATGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGaa                                                                          <  5:612695/151‑1 (MQ=14)
                                                                                                agtctctcTCATAAGCCGAATGGCGTCTCTGCAAATAAGTCCGCCTCAACGAATAAAACTTTGAAG‑AATT‑AACGCACTCCTGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATcc                                                        <  6:284907/141‑1 (MQ=2)
                                                                                                                                                   aaTTAAAATTTGTTG‑AAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATTACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCGGTACGGTGACGCgggg  <  7:1378446/151‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATG‑AAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGG  >  NC_000913/2947316‑2947613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑