Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,270,167 | 0 | C | G | 22.6% | 401.4 / 42.1 | 271 | intergenic (+565/+458) | yhaC/garK | pentapetide repeats‑related protein/glycerate kinase I |
Reads supporting (aligned to +/- strand): ref base C (100/75); new base G (50/1); total (191/80) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.66e-09 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 274 total aligned reads displayed.
TTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGC > NC_000913/3270020‑3270317 | ttGGCTATAGTGTCGTGGACATTTTTTTATATTTATTCCCCTACAAAAGAAAAAACCAGATTTAGCCTGTTTTTAAGTAAACAAGTCGATCTTGAGATATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTg < 8:1642855/150‑1 (MQ=2) gcccttccgctctCTGCCCCTCCAAAACCAAAAACCCGCCGAAGCGGGTTTTTACTTAAACCAGCTGAACCTGACATATAAGCCGCTTTATTTTGGGTATAGCGTAGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGC‑AAAAACccg < 6:461479/139‑1 (MQ=11) attcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTGGTGTAGAGCGTCGAGGCAAGGCCTTCATTGTTGGGCGCCGACAAAAGC‑AAAAACccgccg > 5:804184/1‑151 (MQ=11) accactaaagcccacTCCAAAAGCACAAACCCGCCGAACCGGGTTTTTACGTAAATCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGaa < 7:1492349/137‑1 (MQ=11) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGTCATGCAAAATTGAGCGCCAGCAAAAAC‑AAAAACCCGCCGAAG‑c > 3:183017/1‑151 (MQ=11) tGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGGCCTTCATGGTTGGGCGCCGGCAAAACC‑AAAAACCCGCCGCAG‑Cggggtgt > 7:900996/1‑147 (MQ=11) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTGTTGGGTATAGAGTAGTGGCAAGGCATTCATTCTTAGGCAGCCACAAAAGC‑AAAAACCCGCGGCAG‑GGCGTTtataacg > 5:1359962/1‑148 (MQ=2) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAGTGACCGATAAGCCGCTTTCTTTTGGGTAGAGCGTGGTGGCGAGGGCGTGATCGGTGTGCGCGTCCAATAGC‑AAAAACCCGCCGCAG‑CGGGGTGTTACGTaat > 4:161079/1‑150 (MQ=2) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATCGTTAATCCCCACCAAAAAC‑AAAAACCCGCCGCAG‑CGGGGTTTTTAGTaa > 3:1511355/1‑150 (MQ=11) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGTCATTCATCTTTGTGCGCCTGCAAGAGC‑AAAAACCCGCCGCAG‑GGGGTTGGTTCGTaa > 2:1193447/1‑150 (MQ=11) aaGCACAAACCCGCCGCAACGGTTTATTACGTAAAACAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCa < 7:1784264/151‑1 (MQ=11) aaGCAAAAACCACCCGAAGCTGGTTTTTACGTAAACCAGGTGAAACTGACCGATAATCCGCTTTCTTTTGGGTATAGAGTAGAGGGCATTCAATAAAAGATAAACCCCTACAAAAAC‑AAAAACCCCCCGAAC‑CCCGGTTATACCTAAAta > 8:472843/1‑149 (MQ=2) gCACAAACCCGCCGCAGCGGGTTTTTACGTAAACCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAgg < 6:615932/151‑1 (MQ=255) aaaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAACTTTGTGCCCCGCCAAAACC‑AAAAACCCCGCGAAG‑CGGGGTTTTTAGTAAATCAgggg > 3:600669/1‑148 (MQ=11) aaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATGTTTGGGCCCCGCCAAAAGC‑AAAAACCCGCCGCAG‑CGGGGTTTTACGTAAATCACGTgca > 4:480371/1‑148 (MQ=11) cgccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGGCAATGATAGTTATGCCCCGACAAAAACAAAAAACCCCACAACG‑AGGGTTTTTA‑GTAAATAAAATGaaaatt > 8:1043843/1‑147 (MQ=2) ccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGTGGACAGTAATTCAAAATTAATCACCATCAAAAAC‑AAAAACCCCCCGAAG‑ACCGTTTTTACCTAAAtgacgggcaaattaac > 8:1427939/1‑136 (MQ=2) cgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGTCAATCATATTTTTGCCCCGACAAAAGC‑AAAAAACCGCCGAAG‑AGGGTTGTTTAGTAAATCAGGTGaaaattcacg > 8:1208532/1‑144 (MQ=11) gAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTGATGCCCCTACAAAACC‑AAAAACCCGCCGCAG‑CGGGTTTTTACGTAAATCAggggcaaatggcac > 5:1275754/1‑138 (MQ=11) gAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCTTGGAAAGTCAATCAAAATTGAACACCATCAAAACC‑AAAAACCCGCAGCAG‑AGCGTTTTAACCGAAATCAgctctaaatgaacc > 6:880250/1‑137 (MQ=2) gAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGTGGACAGTCATTCAAAATTAAGCCCCAACAAAAAC‑AAAAACCCGCCGAAGACGGGGTTTACCGT‑AATCAGGTGaaaattcccg > 3:824320/1‑143 (MQ=11) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGTCATTCATCTTTGTGCCCCGCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGGTTTTAAGTAAATCAGGTGAAACTGCCCGAt > 6:741951/1‑151 (MQ=11) aGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGGCATTCATCTTTGGGCCCCTCCAAAACC‑AAAAACCCGCCGCAG‑CGGGTTTTTAAGTAAATCAGGTGAAAGTTCCCGAt > 4:989204/1‑150 (MQ=11) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGGCATTCATATTTATGCCCCTCCAAAAGC‑AAAAACCCGCCGCAG‑CCGGGTTTTAACTAAATCAGGTGAAAATGACCCATAAGcc > 6:316233/1‑151 (MQ=11) ttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGTCAATCATAATTGAGCACCTACAAAAAC‑AAAAACCCGCCGAAG‑CGCGGTTTTACGTAAATCAGGGGAAAATTCCCGATAATCCGGGtt > 8:448496/1‑151 (MQ=14) taggtatacctagagAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTTTCGTTTACAGTCATTCATCTTTCTGCCCCTCAAAAAGC‑AATAACCCGCCTAAG‑CGGGTTTTTAGGTATATCAGGTGAAACTGACCGATAAGCCGGGtt < 8:848578/136‑1 (MQ=11) aCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATGTTTAGGCCCCGCCAAAAAC‑AAAAACCCCCCGAAG‑AGGGGTTTTACCTAAATCACGTGAAACTTACCGATAAGCCGGGTTCt > 6:1645022/1‑151 (MQ=14) aCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATCATATTTGGGCCCCAGCAAAAAC‑AAAAACCCGCCGAAG‑ACCGTTTTTTCGTAAATGAGGTGAAAATGAGCCATAAGCCGGGTTCt > 5:52243/1‑151 (MQ=14) aacccagctcacaCTGACCGATACGCCGCGTTCTTTGGGGTATAGTTTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAACCCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg < 7:115594/139‑1 (MQ=11) aCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATGTTTGAGCCCCACCAAAACC‑AAAAACCCGCCGCAG‑CGGGGTTTTACGTAAATAACGTGAAACTGACCGATAAGCCGGGTTATGTCGTg > 1:642019/1‑151 (MQ=14) ccAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGCGTCGTGGACAGTCAGTCATGGTTATGCCCCGACAAAACC‑AAAAACCCCCAGAAG‑CGCGGTTTTAAGATAATCAGCTGCAAATTACCGATAATCCGGGTTCTGTCGTgc > 1:538813/1‑150 (MQ=9) cggccgatcTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTAGTTTATATTAATTCATCTTTCTGCACCTAGATAATC‑AAAAACACGCAGAAG‑CTGGTTTTTAAGTAATTTAGTTGAATCTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:1772/143‑1 (MQ=9) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCATCAGCTTTGGGCCCCAACAAAACC‑AAAAACCCGCCGAAG‑CGCGTTTTTAAGTAAATCACGGGAAACTGTCCGATAAGCCGGGTTCAGTCGTgcccagg > 4:1079564/1‑145 (MQ=14) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGCCCGATAAGCCGGGTTCTGTGGTGGCCAgg > 1:912360/1‑150 (MQ=255) ctacagatctcGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTTGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACa < 6:1072533/139‑1 (MQ=14) actctgcccctgaaGCCGCTTTCTTTTGGGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtca < 1:346063/139‑1 (MQ=255) aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTGTGTGGTGGACAGtcat > 4:11453/1‑151 (MQ=255) aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATCATTCTGCCCCAGCAAAAGC‑AAAAACCCGCCGAAG‑CCGGGTTTTACGGAAATCAGGTGAAACATACCCATAAGCCGGGTTCTGTGGTCGCCAGtca > 1:250837/1‑150 (MQ=14) cTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATATTTCAACCCCAACAAAAAC‑AAAAACCCGCCGCAG‑ACGGTGTTTAAGTAAAACACGTGAAAATTACCCATAAACCCGGTTATGtttggtaaaaag > 5:391639/1‑136 (MQ=0) cTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGC‑AAAAACCCCCCGCAG‑CGGGTTTTTAAGTAAATCAGGTGAAAATGACCGATAAGCCGGGTTCTGTGGTGGCCCGtcatt > 8:1897410/1‑150 (MQ=14) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCCCCGAAG‑CGGGTTTTTACGTAAATCAGGTGCAACTGACCGATAAGCCGGGTTCTGTGGTGGACAGtcatta > 3:1328858/1‑149 (MQ=255) gACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCa < 1:1026801/65‑1 (MQ=34) aCCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGGCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATc > 1:1207318/1‑151 (MQ=255) cggccgaGCCGCTTTCTTTTGGGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAACCCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGCGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt < 6:1351702/145‑1 (MQ=255) cGATAAGCCGCTTTCTTTTGGGTATAGAGTCGTGGACAGTCATTAATCTTTATTCCCCTCCAAAAGA‑AAAAACCCCCCCAAG‑CGGGTTTTTAACTAAAACAGGTGAAACTGAACGATAAGCCGCGTTCTTTAGTGGatatagtaagagac > 3:1041539/1‑137 (MQ=11) aTAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATCTTTATGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATAAGGTGAAACTGCCCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg > 6:121813/1‑151 (MQ=255) tAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTGTGCCCCACCAAAAGC‑AAAAACCCGCCGCAG‑CCGGTTTTTACGTAAATCAGGTGAAACTGCCCCATAAGCCGGGTTCTGTCGTGGGCAGTCATTCATCTAGGc > 6:1200012/1‑151 (MQ=17) tAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCACCTCAAAAAGC‑AAAAACCCCCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGCTAAGCCGGGTTCTGTGGGGGACAGTCATTGATCTAggg > 2:1087496/1‑150 (MQ=17) aGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAATAATCTTTATGCCCCTACAAAAAA‑AAAAAACCGCCCAAG‑CGGGTTTTTAAGTAAAACAGGTGAAACAGAACGAAAAACAGGGTTCTTTGGTGGAAAGtgaagtggggaagacg > 2:345144/1‑136 (MQ=2) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCCTTCATCTATGcc > 2:1332416/1‑150 (MQ=255) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAAATGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGcc > 5:1148524/1‑150 (MQ=255) gCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGCAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCAATCATCTAGGCCac > 1:848025/1‑150 (MQ=255) ccGCTTTCTTTTGGGTATAGCGTCGTGGACAGTGATTGATGTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGGTTTTAAGTAAATAAGGTGAAACTGACCCCTAAGCCGGGTTCTGTCGGGGCCAGTCATTCATCTAGGCCCGc > 1:1771604/1‑151 (MQ=17) ccGCTTGCTTTTGGGGATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGTGTTTTTACGTAAATCCGGTTAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc < 7:364281/151‑1 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGGCCCTCAATCAAATTTGTTCCCCTCCAAAAAC‑AAAAAACCCCCGAAC‑CGGGGTTTTAAGTAAAAAACGTGAAACACCCCCTTAACCCCGGTTGTGACGAGGACACTCATTCAACttagccccc > 7:692218/1‑142 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTGATCTTTGTGCCCCGCCAAAAAC‑AAAAACCCGCCGAAG‑CGGGGTTTTACCTAAATCAGGTGAAACTGACCCATAAGCCGGGTTATGTCGTGGGCAGTCATTAATCTACGCCAGc > 6:1426605/1‑150 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTGTGCCCCTCCAAAATC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGCTAAGCCGGGTTATGTCGTGGTCCGTCATTAATCTAGGCCCGc > 6:567287/1‑150 (MQ=17) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACAGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGCCAGc > 8:1829000/1‑150 (MQ=255) ttctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTAAGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCg > 1:1517008/1‑151 (MQ=255) tctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAAACCGCCGAAG‑CCGGTTTTTAAGTAAATAAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCAGCAATCGc > 7:168138/1‑151 (MQ=255) gtgctGGGTCTCGCGTCGGTGTGAGTCATTCATCTAGCAGCCCCAAAAAAAGC‑AACACACTTCTGAAT‑CGTGTTCTTACGTAATGACCGAGCATCTGAGCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCt < 6:1521424/147‑1 (MQ=255) tttGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAACCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc > 4:1397408/1‑150 (MQ=255) ttGTGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCGCTCCAAATGG‑TAAATGCCGCCGATT‑CGGGTTTTTACGTAAATCATGTGAAACTGAGGGATAAGCCGGGTTGTGTCGTGGACAGTGATTCATCTAGGACAGCAATCGCTCa < 1:426366/150‑1 (MQ=18) ttGGGTATAGCGTAGTTGACAGTAATTCATCTTTCTGCCCCTCCAAAAGC‑AAACACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAATCTGACCTATATGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCa < 1:562913/150‑1 (MQ=21) ggTATAGCGTCGTGGACAGTAATTAATCTTTCTTCCCCTACAAAACC‑AAAAACCCCCCGAAA‑CGGGTTTTTAACTAAATCAGGTGAAACTGACCCATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGTCCACCAATAGCTCACTgg > 8:1481682/1‑151 (MQ=21) ggTATAGCGGCGTGGACAGTCATTCATCTTTCTGCCCCTACAAAAGC‑AAAAAGCCGCCGAAG‑CGTGTTTTTACGTAAATCAGTTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTgg < 4:759690/151‑1 (MQ=255) tataGCGTCGTGGCCAGTCATTCATCTTTCTGCCCCGCCAAAAAC‑AAAAACCCCCCGCAG‑CGGGTTTTTACGTAAATCAGGGGCAACTGACCGCTAAGCCGGGTTCTGTCGTGGGCAGAGATTGAAGTAGGCCCGCCATCGCGCACAGGCt > 8:644010/1‑151 (MQ=17) ataGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCt < 7:1298662/150‑1 (MQ=255) aaccgtcgtGGACAGGCATTCATCTTTCTGCCCCTCCAAAACC‑AAAAACCCGGCTAAG‑GGGGTTTTTAAGTAAATCAGGTGAAACTCAGCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCa < 6:103009/148‑1 (MQ=21) ggtggttgagaGTCAATCATCTTTCTGCCCCTCCAAACGC‑ATAATCCGGCAGAAG‑CGGGTTTTTACGTAAATCAGGTTAAACTGAGCGATAAGCGGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc < 7:1046401/141‑1 (MQ=21) cgtcgtGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACAGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGCCAGCAATCGTTCACTGGATAAagc > 6:1767954/1‑151 (MQ=255) cgtcgtGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTAAGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc > 2:396827/1‑151 (MQ=255) cgtcgtGGACAGTCATTCATCTTTATGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATAGCACACAGGCTCAagc > 2:1353768/1‑151 (MQ=255) tttcctttctttcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagcag < 5:1663698/138‑1 (MQ=255) tGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGT‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAGAGtc > 7:1594606/1‑110 (MQ=255) ggACAGTCATTCATCTTTCAGCCCCTCCAAAAGA‑AAAACTCCTCCGAAG‑GGGGTTTTTACGTAAATCAGGTGAATCTGACATATAATCCGTTTTGTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTa < 7:547036/151‑1 (MQ=21) gcaCAGTCATTCATCATTCTGCCACTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt < 6:260814/148‑1 (MQ=255) gACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑TGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTAc > 6:1794830/1‑151 (MQ=255) aGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCg > 7:775493/1‑151 (MQ=255) aGTCAATCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCg < 3:1740925/151‑1 (MQ=255) gTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCCGCCTACCCgg > 2:233333/1‑151 (MQ=255) tcattcatCTTTCTGCCCCTCCAAAAGT‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGTTTCTGTGGTGTAGAGTCATTGGTCTAGGCAAGCAATCTGTCACTCGCTCa > 1:1318773/1‑136 (MQ=14) tcattcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCggg > 1:1190086/1‑151 (MQ=255) tcattcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCggg > 7:1845914/1‑151 (MQ=255) tcattcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCggg > 3:289841/1‑151 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGt > 1:1003757/1‑151 (MQ=255) attcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGtt > 5:1191013/1‑151 (MQ=255) attcatCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGG‑CAGGCATTGCTATAGGGCAGGAATGCCTACCTTGCTCAAGCAGCCGTCCCGGGtt > 3:1023213/1‑150 (MQ=17) tctttttttTGCCCCTCCAAAAGC‑AATAACCCGACTAAG‑CGGGTTTTTAGTTAAATCAGGTGATATTGACCGATAAGCGGGTTTGTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTc < 2:1452091/145‑1 (MQ=25) tcatCTTTCTGCCCCTCCAAAGGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTc > 7:1542446/1‑150 (MQ=255) catcatTCTGACCCTCAAAATTT‑AAATACACGCCGATG‑TTGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAg < 2:626298/151‑1 (MQ=37) catCTTTCTGCACATTCAAAAGG‑AAAAACCCTCCTAAG‑CGTGTTTTTAAGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAg < 2:1251330/151‑1 (MQ=37) atCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACACGGGTTCAGt > 8:1748042/1‑151 (MQ=255) ttCTGCCCCTCCAAAAGC‑AAAACCCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTAc < 5:1741217/149‑1 (MQ=255) ttCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTa < 7:1431771/148‑1 (MQ=255) ttCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTAc < 3:985122/149‑1 (MQ=255) ttCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCACCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACgg > 4:560877/1‑151 (MQ=255) ttCTGCCCCTCCAAAAGC‑AAAAACCCGCAGAAG‑CTGGTTTTTACGTAAATCAGGTGAAACTGAGCGATAAGCGGGTTTCTGTCGTGGACAGTCATTCATCTGGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTAc < 5:1055803/149‑1 (MQ=37) tCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACggg > 5:531564/1‑151 (MQ=255) cTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGc > 4:1565146/1‑151 (MQ=255) | TTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGC‑AAAAACCCGCCGAAG‑CGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACCCGGGTTCAGTACGGGC > NC_000913/3270020‑3270317 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |