Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,8050TA26.7% 75.6 / 34.3 133R629R (CGT→CGA) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base T (43/31);  new base A (25/2);  total (82/51)
Fisher's exact test for biased strand distribution p-value = 7.43e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 136 total aligned reads displayed.

AGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACA  >  NC_000913/1708658‑1708954
                                                                                                                                                    |                                                                                                                                                      
aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCACCAGGCTAATGCGGAGCCAGAA‑GAACAGGTCGCTCCGCGCAAAGCCGCCGTCGCAGCGGCTCTTGCCCgcgcg                                                                                                                                                     >  3:598433/1‑150 (MQ=11)
     aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCACGCTGGAACAGCCACAGCCGACTGCGCACCCCGAC‑GAACAGCGGCCGCCGCGCAAAGCGGCCGTGGCCGCGGCTATTGCCCgcgcgccggc                                                                                                                                                >  3:1145994/1‑145 (MQ=2)
       caggaggATCCGCGAAAACCAGCCGTAGAAGCAGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATTCGGAACCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCAc                                                                                                                                              <  8:1078856/145‑1 (MQ=11)
         ggTCGATCCTCGCAAACCCGCCGTAGAAGCAGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGc                                                                                                                                            <  3:487501/151‑1 (MQ=255)
          gaggacccGCGCATAACGGCCGTAGAAGCCGCTATATCCCGGGACTAAGCTCGCAACCTGGAACACCAACAGCATAATGACGAACCAGAA‑GAACAGGGAGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCa                                                                                                                                           <  8:725853/145‑1 (MQ=2)
            tgATCCTCGAAAATCTGCCGTTGAAGCAGCTATTGCCGGTGCCAAAGCGCGCAAGCTGGAAGAGCAACAGGCTAATTCGGAACCAGAA‑GAAGAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCaa                                                                                                                                          <  7:353822/149‑1 (MQ=11)
            ccaTCCTCGAAAACCGGCCGTCGAAGCAGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAg                                                                                                                                         <  2:110771/149‑1 (MQ=11)
            cGATCCGCGAAAAACAGCCGTCGAAGCAGCTATTGACCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGATAATGCGGAACCAGAA‑CAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAg                                                                                                                                         <  8:773964/151‑1 (MQ=11)
             gATCCGCGAAAACCGGCCGTAGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑CAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAg                                                                                                                                         <  2:969511/150‑1 (MQ=11)
                ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAA‑GAACACGTGGATCCGCGCAAAGCCGCAGTGGCCGCGGCTATTGCCCGCGCGAACGCCCGCaacgagg                                                                                                                                     >  4:1366144/1‑146 (MQ=11)
                       aaactgccgTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGACATATGAAGAGCCACAA‑GAACAGGTAGATACTAGCAAATAATCATTAGAAGCGGCTATTGCCATTGAATAAGAAAAAAAGCTGGAACAGcc                                                                                                                              >  7:296882/6‑150 (MQ=9)
                        aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGAGGAACCAGAA‑GAACAGGTAGATCCGCGCAAAGCGGCCGTTGCCGCGGATATTGGCGGAGCCAAAGCCCGCaccagggaacacacc                                                                                                                             >  3:25963/1‑137 (MQ=11)
                           cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTAGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCGAACGCCCGCAAGGGCGACCAGCAAccg                                                                                                                          >  3:531923/1‑149 (MQ=11)
                           cgccgGCGAACCCGCTATTGGACTTGCCAAAGCCCGCAAGCTGCAACACCAACTGCCTTATGCGGAACCAGAACCTGCTGGT‑GATCCGCGCAAACCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAg                                                                                                                          <  3:297424/151‑1 (MQ=2)
                            gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGATATGGCAGGAGCAGAA‑GACGGGGGTGCTCAGAGCAGAGCCGACGTCGAAGCCGCTATTGCCCGTGCAAAAGCACGCAAGCGGGCACGGcgcgcgg                                                                                                                         >  4:1056289/1‑145 (MQ=9)
                              cgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGAGAGCAGAA‑GACCATCTAGATCCGCACAAAGCTGCCGTAGAAGCGGCTAATGCCCGGGCCAAAGAACCCAAACTGGAAAAGCAACAGGcg                                                                                                                       >  1:493663/1‑150 (MQ=11)
                                     gCCGCTATTGCGCGTGCCAAAGCGAGCAAGCTGGAACAGCAACAGGAAAATCAGGAACCAGAA‑CAACATGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCg                                                                                                                <  4:1170222/151‑1 (MQ=11)
                                        gCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAA‑GAACAGGTAGATCCGCGCAAAGCCGCCGTAGCAGCGGCTATTGCCCGCGCCCACGCCCCAAACCGGGAACAGCAGCAGGATAATACCGAgg                                                                                                             >  4:1569453/1‑150 (MQ=11)
                                        ccTATTGCCCGGGCCAAAGCGCGGAAGCTGGAACACCAACAGGCTAATGCGGAACCAGAA‑CCACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGc                                                                                                             <  3:961823/150‑1 (MQ=255)
                                         cTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAAAACGCTAAAGCGTAGACAGAA‑GAAAAGGTCTATCCGATAAAAGACGACGTCGAAGCCGCTATTGCAATAGAAAAAGCACGCAAGCTGGAACAGCAGCAGGCTAGTGcggcggg                                                                                                            >  7:953032/1‑145 (MQ=2)
                                            acgCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACACGCTACTGCCTAACCAGAC‑GACCTCCTACATCCGCGCAACCGAGCCGTCGAAGCAGCTATAGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGa                                                                                                         <  3:344300/149‑1 (MQ=11)
                                                   tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGCGCCAAGGCCCGAAACGGGGAACAGCACCAGGCTACTGCGGAGCCAGaacccc                                                                                                    >  3:54483/1‑146 (MQ=11)
                                                   ggacAAACCCCGCAAGCTGGAAGAGCATCAGCATACTCCGGAACCAGAA‑CACGAGGCTGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAg                                                                                                  <  7:105594/148‑1 (MQ=11)
                                                   cgCCAAATCGCGCTAGCTGGATTAGCAACAGGCTTCTCATGACCTAGAA‑AAAGTGGGTGATCCTCGTAAATCAGCCGTTGAAGCAGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAacaaca                                                                                                   <  7:1372769/149‑1 (MQ=2)
                                                    gcctacccccggaatcTGGAAGAGCTACAGGATACTCCGGAAGCAGAA‑AACGAGGGTGATCCGCGGAAATCAGCCGTGGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAgg                                                                                                 <  6:232329/136‑1 (MQ=9)
                                                     aaaaaactcgcAATCTGGAAGACCAACAGGATAATCAGGAACCAGAA‑CACCTGGGCGATCCCCGTAAACCCGCCGTCGAAGCAGCTATCGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                <  2:1615029/143‑1 (MQ=11)
                                                      aaaaGCGGGGAATCTGGAACAGCAACAGCAAACTCCGGAACCAGCA‑CCAGAGGCCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATCGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑c                                                                                              <  4:1554853/150‑1 (MQ=11)
                                                       aaacggcgcAAGCTGGAAGAACAACAGGATACTGCGGAACCAGAA‑CAAGTTGGCGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑Cg                                                                                             <  8:319429/146‑1 (MQ=11)
                                                       aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCAAACGCAAAAAAACACGCACAGCAGCAGGATAAAGACGAGCCAGAAAAGCAAGT‑c                                                                                              >  7:789838/1‑150 (MQ=2)
                                                            gctcAAGCTGGAAGATCAACAGCCTTATGAGGAACCAGAA‑CAAGATGGCGATCCTCGGAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCcg                                                                                        <  3:1532143/148‑1 (MQ=11)
                                                            gcggAAGCTGGAACAGCATCAGGATAATCCGGAACCAGAA‑CACCAGGTCGATCCGCGTAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCcg                                                                                        <  2:660204/151‑1 (MQ=11)
                                                            ccgcAAGCAGGAAGAGCACCAGGATACTCCCGACCCAGAA‑ACCGTTGGCGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCcg                                                                                        <  4:1562279/150‑1 (MQ=2)
                                                              gcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCcgcg                                                                                      <  3:971539/151‑1 (MQ=40)
                                                              gcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTAGATCCCGAGCGAGAGCACGAAAGCAAGAGCAGAAGCAAGATTATGCCTATCCAGAAGAACAGGttcataaaa                                                                                        >  1:830022/1‑142 (MQ=2)
                                                                 aGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg                                                                                                                                     >  6:145385/1‑102 (MQ=11)
                                                                   caggaagacctaCAGGATAATGCGGAAGCAGAA‑ACAGATGTTGATCCTCGCAAAACTGCCGTCGAAGCAGCTATAGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAg                                                                                 <  1:1565938/140‑1 (MQ=11)
                                                                     ggAAGAGCTACAGCATAATGCGGAAGCAGAA‑CAACTGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAg                                                                                 <  8:261618/149‑1 (MQ=11)
                                                                       aaCAGCAACAGGCTAATGCGGAACCAGAA‑CAACAGGTCGATCCGCGCAAAGCAGCCGTCGAATCCGATAATCCACGTGCAACCAAACGCAATAGGCAACAGAATACCGCTAATGCGGAGCCAGAACAACAGGA‑ATATCCGCGCAAAgcggc                                                                             >  1:1413229/1‑151 (MQ=2)
                                                                        aCAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCACAAAGGAAGACACACCAAGAGGCTAATACTGAACGAGAAAAACAAGT‑TCAACCGCGCagccctaa                                                                             >  7:1568262/1‑143 (MQ=2)
                                                                           gCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGAGCGAAAGCAAAAAAACAGGAACAGCAGCAGACATATGAAGAGCGTCCAGAACAGGA‑AGATCCGAGCAAAGACGCAGt                                                                          >  5:1234561/1‑150 (MQ=2)
                                                                             aaCAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCGGCAGTGGAAGCGGCTATTGCCCGCGCCAACGCCCACAACAAGGAACAGCACACGGCTGATCTCGAGACACATGAACAGGT‑CGAGCCGCCCGAAGCCGCCTTCg                                                                        >  8:823958/1‑150 (MQ=2)
                                                                             aaCAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCGGGCACAGCAACAGGCTAATGCCGAGCCCGAACAACAGGT‑CGATCAGCGCAACGCCGCCGtagc                                                                       >  7:1558037/1‑148 (MQ=14)
                                                                              aCAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCGGCCGTAGCAGAGGCTATTGCACGTGCCAAAGCACGCAAGCTGGAACAGCGACAGGCTAATGCGGCGCGAGAACAACAGGT‑CGATCCGCGCAAAgcggcggagcgg                                                                      >  8:343739/1‑144 (MQ=11)
                                                                                aGGCTAATGCGGAACCAGAA‑GAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGAGCCCAGGCACAAAAACAGGCACAGCAGAAGGCTGAACACGAGCAAGAACAACAAGT‑CGATAATCTCAAAGCCGCAGCCGACGc                                                                    >  3:1592679/1‑151 (MQ=9)
                                                                                    tAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACACAAACAGGAACAGCAACAGGCAAATCCGGAGCCAGAAGAACAGGT‑CGATCCGCTCAAAGCTGCAGTAGAAGCCGCt                                                                >  6:1407863/1‑151 (MQ=11)
                                                                                    tAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAGCAGGAACAGCAACAGGGTAATGACGAGCCAGAACAACAGGG‑GGATCCGCGAAAAGCAGCCGTAGACGcgtct                                                                >  6:207928/1‑147 (MQ=14)
                                                                                    tAATGCGGAACCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGACCAAGCATGAAGTCACCTTTGCACAGCACTCACGGGGGGAGAGCTCCAGTCTAATGCGCAGCCAGAACAACAGGT‑CGATCCGCGCCACGccgccgggggcggcggg                                                                >  8:236545/1‑140 (MQ=2)
                                                                                       tGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCACGTGCCAACGCACGCCCGCTGGAAGCGCGACAGGGTAATGGCGCGCCAGAACACCCGGG‑TGATCCGAGCAAAGCGGCCGTGGCCGCGGCTAtt                                                             >  3:400377/1‑151 (MQ=9)
                                                                                       tGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCAAGCAAGCTGGCACAGCAGCAGGCTAATGCCGAGCAAGAACAACAGGT‑CGCTCCGCGCAAAGCCGCAGTTGCCGCGGCTAtt                                                             >  1:1027597/1‑151 (MQ=14)
                                                                                        gCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCCAGAAGAACAGGT‑GGCTGCGGGCCAGGCCGCGGGGGAAGgcgcgtgtg                                                            >  8:219304/1‑146 (MQ=11)
                                                                                         cGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCAAGAAACCTCGAACAGCAAAAGGATAAAGCCGAGCCAGAAAAACAATT‑CGATACGCCAAAAGCCGCAGtagccccgtctattcc                                                           >  1:1094473/1‑136 (MQ=9)
                                                                                             aCCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGCCCACAGAACAGCATCT‑AGATCCGAAAAAAGCCGCCGTAGAAGCCGCTATTcccggg                                                       >  7:452939/1‑148 (MQ=11)
                                                                                              ccAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCGGCTATTGCCCGCGCAAAAGCACGCAAGCAGGACCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTGGCCGCCGCGATTGCCCgcc                                                      >  4:836323/1‑149 (MQ=14)
                                                                                              ccAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAACCACGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGA‑GGATCCTCGAAAAGAAGCCGTTGCCGCAGATATTGCCCGac                                                      >  6:220954/1‑150 (MQ=2)
                                                                                               ccagcagcagatgttgATCCCCGAAAACCTGCCGTAGAAGCAGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAg                                                      <  2:35836/136‑1 (MQ=11)
                                                                                               ccagcaccagaggcggATCCCCGGAAACCGGCCGTGGAAGCAGCTATGGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAg                                                      <  3:192073/136‑1 (MQ=11)
                                                                                               ccagaacccccgggcGATCCACGCAAAACCGCCGGCGAAGCAGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAg                                                      <  2:754276/137‑1 (MQ=11)
                                                                                                cagaatcagtggctgATCCACGCAAATCCGACGTTGAAGAAGCTATTTCCCGTGCCAAATCTCGGAAGCTGGAACATCAACAGGATAATTCCGACCCAGAACAACATGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGc                                                     <  6:867283/137‑1 (MQ=2)
                                                                                                agaa‑gaACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGCCCGAGCGAACGCCCGAAAGCGCGACCAGCAGCAGGGTAGTTCGGAAGCTGACCCGGAGGT‑ACATCCGCGCACAGCCGCAGTCGCCGCGGCGCTTGCCCgcggg                                                    >  3:1383606/1‑147 (MQ=255)
                                                                                                agaa‑gaACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGAGCAAAAGCAAGCAAACAGGAAAAGCAACAGCCTAATGAAGAGCAAGAAGAAAAGGT‑AGATACTAGCAAAGCGGCCGTTGCCGCGGCTATTgaaagagc                                                     >  7:1626282/1‑143 (MQ=255)
                                                                                                agaa‑caCCAGGCCGATCCACTTAAATCAGCCGTCGAAGCCGCTATAGCCCTAGACAAACCCCTCAAGCTTGAACAGCAACAGGCTTATGCCGATCCAGAACAAGATGC‑CGATCCTCGCAAATCCGCCGTCGAAGCCGCTAtt                                                             <  5:1081612/142‑1 (MQ=2)
                                                                                                 ataaaaactgctggATCCACGCAAACGAGCCGTAGAAGCCGCTATTGCCCGTGGCATAGCTCGCAAGCTGGAACATCAACAGCATAATTCCGAGCCAGAACAACAGGT‑GGATCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGc                                                     <  3:10931/137‑1 (MQ=9)
                                                                                                  aa‑gaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGGGCCAAAGCCCGCAAGCTCGAACAGCACCAGGCTAATGCCGAGGAAGAACACGAGGT‑CGCTCAGCGCAAAGCCGCCGAGGCCGCCGCGATTGCCCgcgcaac                                                  >  8:654354/1‑148 (MQ=14)
                                                                                                   a‑gaaCAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCACACAACCTAGAACCGGAAAATGCTAATGCCGTGGAAGAAAAACAGGT‑GGATACGCGCAACGCCGAAGTAGAAGAAGCAATTGCCCgcgcgc                                                   >  1:982905/1‑147 (MQ=2)
                                                                                                   a‑gaaCAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGT‑GGATCCGCGCAAAGCAGCAGTAGAAGCGGCTATTGCACGAgaaaa                                                  >  6:469285/1‑146 (MQ=11)
                                                                                                      aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgc                                               <  8:1434086/151‑1 (MQ=40)
                                                                                                          ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACGCACGCAAGCAGCAACAGCCACAGGCTAAAGCGGCGCCAGAAGAACAGGT‑AGATACGCGCAAAGCCGCAGTCGCAGCCCCTATAGCCCGAGcacacgcgct                                            >  2:1638527/1‑141 (MQ=11)
                                                                                                          ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTGGCAGCGGCTATTGCCCGCGCCAACgcgcgc                                           >  8:1121191/1‑151 (MQ=14)
                                                                                                              gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCCGCGCCAACGCCCGCAAAc                                       >  3:221871/1‑151 (MQ=14)
                                                                                                                   gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑TGATCCGCGCAAAGCGGCAGTTGCAGCCGCTATTGCCCGAGCCAACGCGAGCAACCGCGac                                  >  8:328263/1‑150 (MQ=14)
                                                                                                                   gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGT‑CGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCCAATGCCCACaacccggcc                                  >  8:1029033/1‑144 (MQ=11)
                                                                                                                    cctaaaaCCGCCGTTGAAGCCGCTATAGGCCGCGCCAAAGCTCGGAATCTGGAACATCATCAGGCTAATTCCGACCCAGAAAAAGTGGT‑CGATCCTCGGAAAGCCGCCGTGGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc                                 <  7:1645943/148‑1 (MQ=255)
                                                                                                                     gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGAGCCAACGCGCGCAAACGCGacc                                 >  1:1424979/1‑148 (MQ=14)
                                                                                                                       aacagcgccgTCCACGCAGCTAGTCCCCCGGACAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAAGATGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAg                               <  3:303940/145‑1 (MQ=14)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCCAACGCCCGAAAAcccgagatcc                              >  6:521220/1‑142 (MQ=11)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTCGCCGCCGCTATTGCACGAGCAAAAGCAAGCAAACGCGACCaa                               >  7:1527852/1‑149 (MQ=14)
                                                                                                                            cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCAGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAAACCCGAACAGCAAcac                         >  6:1476736/1‑149 (MQ=14)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGGGAACAGCaaaagg                        >  5:1749347/1‑147 (MQ=14)
                                                                                                                                gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCGCGCAACCCGGCACAGCACCAGGCt                      >  8:1251230/1‑150 (MQ=14)
                                                                                                                                gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAACGCCAAAAAACCCGAACAGCAACAggat                      >  7:1625381/1‑148 (MQ=14)
                                                                                                                                  cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAAt                   >  8:1132021/1‑151 (MQ=255)
                                                                                                                                  cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCGGAACAGCAACCGGCTaa                    >  7:85109/1‑150 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGACCAGCACCAGGCTAAtc                  >  8:777168/1‑150 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAACAAACTCGAACAGCAACAGGATAATg                  >  7:63976/1‑151 (MQ=11)
                                                                                                                                    aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAGGCGCGCACACGGGAACAGCAACCGGCTAATGc                 >  2:1019788/1‑151 (MQ=255)
                                                                                                                                    aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCAGATCCAAAAAAACACGT‑GGATCCGAACAAAGAAGCCGTATAAGAAGCTATTGCACGAGCCAAAGAACGAAAAATGGAACAGCAACCGGCTAATgg                 >  7:708567/1‑150 (MQ=2)
                                                                                                                                     aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTGGACGCGGCTATTGCCCGAGCGAACGCGCGCAAACGGGCACAGCACCAGGCTCATGCg                >  2:477742/1‑151 (MQ=14)
                                                                                                                                     aGCCGCTAATGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGAGGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                <  3:453865/151‑1 (MQ=255)
                                                                                                                                      gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTAGACGCGGCTATTGCCCGCGCACAAGCGAGCAAACCCGAACAGCACAAGGCTAAtcacg               >  1:827437/1‑147 (MQ=14)
                                                                                                                                        cGCTATTCCGCGCGCCACAGCCCGCAAGCTGGTTTAGTATCAGGCTAATGCGCACCCTGATCAAGAGCG‑AGATCCGCCCAATGTGGCCGTCGAAGACGCTATTGCGATATCCAAAGCGCGCAATCTGGAACAGCAACCGGCTAATGCGGAg             <  7:144342/151‑1 (MQ=255)
                                                                                                                                         gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTGGAAGCCGCTCTAGCGCGCGCCTCAGCGCGCCAGCGCGCTCAGCAACCGGCTAATGCggtcg            >  2:224518/1‑148 (MQ=14)
                                                                                                                                           tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAA‑AGATACGAACAGCGAAAAGAAGCCATAGAATCGACTCTTGACAGAACCAAAGCGAGCAAGCCGTAACATAAAAAAAATAATGCGGAGcc           >  1:1014037/1‑150 (MQ=2)
                                                                                                                                              tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGACGAACAGGT‑CGCTCCGCGCAAAGCCGCCGTCGCCGCGGCGAGTGCCCGCGCCCAAGCCCTCACCCCCGCCCAGCAACAGGCTAAGGCGGAGCCaga        >  5:772810/1‑150 (MQ=2)
                                                                                                                                                cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGT‑CGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCCCGCGCGAAGGCGCGCAAACGGGACCAGCACCAGGGTCTTGCGGAGCCaga        >  4:843019/1‑148 (MQ=14)
                                                                                                                                                cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCCAACAAACCCGACCAGCACCAGGATAAAGACGAGCAaga        >  5:924058/1‑148 (MQ=2)
                                                                                                                                                cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGCAAGCGCGCAAACGCGAACAGCACCCGGCTAATGCGGAGCCaga        >  7:44353/1‑148 (MQ=17)
                                                                                                                                                cccGCGCCACAGCCCGCAAGCTGGAACACCAACAGGCTAATGCCGACCCAGAACAACATCG‑CGATCCGCCCAAAGCCCCAGTCGAAGCCTCTCTTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga     <  6:578549/151‑1 (MQ=25)
                                                                                                                                                   gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑GGATCCGCGCAAAGCCGCAGAAGCCGCCGCTATTGCCCGCGCCAACGCCCAAAAACGCGCACAGCAGCAGGCTAAACCCGAGCCcgaagacc   >  5:1426743/1‑148 (MQ=2)
                                                                                                                                                   gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑GGATCCGCGCAAAGCGGCAGTCGCCGCCGCTATTGCCCGCGCGAAGGCCAGAAAAGCGGCCCAGCAGCAGGCTTTTGCGGAGGCagaagtggt  >  8:1050293/1‑147 (MQ=2)
                                                                                                                                                   gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTGGAAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACCGGACCAGCAAAAGGGTAAAGACGAGCAAGAAAAAc   >  7:1181184/1‑150 (MQ=11)
                                                                                                                                                    |                                                                                                                                                      
AGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAA‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACA  >  NC_000913/1708658‑1708954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑