Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,8830CA24.9% 292.0 / 25.3 205V655V (GTC→GTA) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (105/31);  new base A (42/3);  total (165/40)
Fisher's exact test for biased strand distribution p-value = 1.55e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 207 total aligned reads displayed.

AACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT  >  NC_000913/1708735‑1709033
                                                                                                                                                     |                                                                                                                                                      
      cTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAATCTGGAACAGCAACAGGCTAATGCCGAGCCAGATCGCCAGGT‑CGCTCCGCGGAACGCCGCGGTCGACGcggg                                                                                                                                                >  2:553098/1‑148 (MQ=14)
          tGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCACGTGCCAACGCACGCCCGCTGGAAGCGCGACAGGGTAATGGCGCGCCAGAACACCCGGG‑TGATCCGAGCAAAGCGGCCGTGGCCGCGGCTAtt                                                                                                                                            >  3:400377/1‑151 (MQ=9)
           gCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCCAGAAGAACAGGT‑GGCTGCGGGCCAGGCCGCGGGGGAAGgcgcgtgtg                                                                                                                                           >  8:219304/1‑146 (MQ=11)
                aCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGCCCACAGAACAGCATCT‑AGATCCGAAAAAAGCCGCCGTAGAAGCCGCTATTcccggg                                                                                                                                      >  7:452939/1‑148 (MQ=11)
                 ccagcagcagatgttgATCCCCGAAAACCTGCCGTAGAAGCAGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAg                                                                                                                                     <  2:35836/136‑1 (MQ=11)
                   ataaaaactgctggATCCACGCAAACGAGCCGTAGAAGCCGCTATTGCCCGTGGCATAGCTCGCAAGCTGGAACATCAACAGCATAATTCCGAGCCAGAACAACAGGT‑GGATCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGc                                                                                                                                    <  3:10931/137‑1 (MQ=9)
                   agaagaACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGCCCGAGCGAACGCCCGAAAGCGCGACCAGCAGCAGGGTAGTTCGGAAGCTGACCCGGAGGT‑ACATCCGCGCACAGCCGCAGTCGCCGCGGCGCTTGCCCgcggg                                                                                                                                   >  3:1383606/1‑147 (MQ=255)
                   agaacaCCAGGCCGATCCACTTAAATCAGCCGTCGAAGCCGCTATAGCCCTAGACAAACCCCTCAAGCTTGAACAGCAACAGGCTTATGCCGATCCAGAACAAGATGC‑CGATCCTCGCAAATCCGCCGTCGAAGCCGCTAtt                                                                                                                                            <  5:1081612/142‑1 (MQ=2)
                      agaaCAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCACACAACCTAGAACCGGAAAATGCTAATGCCGTGGAAGAAAAACAGGT‑GGATACGCGCAACGCCGAAGTAGAAGAAGCAATTGCCCgcgcgc                                                                                                                                  >  1:982905/1‑147 (MQ=2)
                       gaaCAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCCGCGCGaagg                                                                                                                               >  5:957437/1‑149 (MQ=14)
                        aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgc                                                                                                                              <  8:1434086/151‑1 (MQ=40)
                            ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACGCACGCAAGCAGCAACAGCCACAGGCTAAAGCGGCGCCAGAAGAACAGGT‑AGATACGCGCAAAGCCGCAGTCGCAGCCCCTATAGCCCGAGcacacgcgct                                                                                                                           >  2:1638527/1‑141 (MQ=11)
                                gATCCGCGGAAAGCGGCCGTGGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAc                                                                                                                      <  3:984618/151‑1 (MQ=255)
                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCCGCGCCAACGCCCGCAAAc                                                                                                                      >  3:221871/1‑151 (MQ=14)
                                gATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCACGAGCCCAAGCGCGCaagc                                                                                                                      >  7:1514291/1‑149 (MQ=14)
                                 agccGCGCAAAACTGCCGCCGCCGCCGCGCTTCCCCGGGCCCCACCCCGCAACCTGGAACACCAACAGGCTACTGCCGACCCAGAACCACAGGC‑CGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACg                                                                                                                     <  3:619912/149‑1 (MQ=9)
                                  cccccccAAACCCGCCGTCGAAGCAGCTATTGCCCTTGACAAAGCACGCAAGATGGAACAGCAACAGGCTACTGCGGAGCCACAACAACAGGT‑CTATCCCCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACgg                                                                                                                    <  8:1700082/145‑1 (MQ=14)
                                     gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑TGATCCGCGCAAAGCGGCAGTTGCAGCCGCTATTGCCCGAGCCAACGCGAGCAACCGCGac                                                                                                                 >  8:328263/1‑150 (MQ=14)
                                     gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGCGCGAAAGCCCGAAACCGGGac                                                                                                                 >  1:419797/1‑150 (MQ=14)
                                     gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGT‑CGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCCAATGCCCACaacccggcc                                                                                                                 >  8:1029033/1‑144 (MQ=11)
                                      cctaaaaCCGCCGTTGAAGCCGCTATAGGCCGCGCCAAAGCTCGGAATCTGGAACATCATCAGGCTAATTCCGACCCAGAAAAAGTGGT‑CGATCCTCGGAAAGCCGCCGTGGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc                                                                                                                <  7:1645943/148‑1 (MQ=255)
                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCCAACGCCCGAAAAcccgagatcc                                                                                                             >  6:521220/1‑142 (MQ=11)
                                          aaaatgccgTAGAAGCAGCTATTTCCCGGGAAAAATCACGGAATCAGGAACACCAACAGGCAAATCACGACCCAGAACAACATGG‑CGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGct                                                                                                            <  2:1714153/146‑2 (MQ=9)
                                            cccgcccgcccacccGCAATCGCCCGCCCCAAAGCTCGAAAGCTCGAACACCAAGACCCTACAGCCCACCCACACCAACAGGT‑CTACACTCGCAACGCCTCCGGAGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAAc                                                                                                          <  8:454191/138‑1 (MQ=9)
                                               gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGGGAACAGCaaaagg                                                                                                       >  5:1749347/1‑147 (MQ=14)
                                                 cgTCGACGCCGCTAGCGCGCTGGCCGACGCACGCAAGCAGGAACACCTCCAGGCTACTCCCGACGCAGAACCCGAGGG‑CGATCCCCGCAAACCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCt                                                                                                     <  3:1020945/151‑1 (MQ=9)
                                                  gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAACGCCAAAAAACCCGAACAGCAACAggat                                                                                                     >  7:1625381/1‑148 (MQ=14)
                                                    cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAAt                                                                                                  >  8:1132021/1‑151 (MQ=255)
                                                    cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCGGAACAGCAACCGGCTaa                                                                                                   >  7:85109/1‑150 (MQ=255)
                                                     gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTGGAAGCCGCTATTGCCCGAGCAAAGGCCCGAAAACGCGACCAGCacaaggcaaaa                                                                                                  >  6:1578320/1‑140 (MQ=14)
                                                     gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGACCAGCACCAGGCTAAtc                                                                                                 >  8:777168/1‑150 (MQ=255)
                                                      aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAGGCGCGCACACGGGAACAGCAACCGGCTAATGc                                                                                                >  2:1019788/1‑151 (MQ=255)
                                                      aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCAGATCCAAAAAAACACGT‑GGATCCGAACAAAGAAGCCGTATAAGAAGCTATTGCACGAGCCAAAGAACGAAAAATGGAACAGCAACCGGCTAATgg                                                                                                >  7:708567/1‑150 (MQ=2)
                                                       aGCCGCTAATGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGAGGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                                                                                               <  3:453865/151‑1 (MQ=255)
                                                          cGCTATTCCGCGCGCCACAGCCCGCAAGCTGGTTTAGTATCAGGCTAATGCGCACCCTGATCAAGAGCG‑AGATCCGCCCAATGTGGCCGTCGAAGACGCTATTGCGATATCCAAAGCGCGCAATCTGGAACAGCAACCGGCTAATGCGGAg                                                                                            <  7:144342/151‑1 (MQ=255)
                                                           gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTGGAAGCCGCTCTAGCGCGCGCCTCAGCGCGCCAGCGCGCTCAGCAACCGGCTAATGCggtcg                                                                                           >  2:224518/1‑148 (MQ=14)
                                                             tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAA‑AGATACGAACAGCGAAAAGAAGCCATAGAATCGACTCTTGACAGAACCAAAGCGAGCAAGCCGTAACATAAAAAAAATAATGCGGAGcc                                                                                          >  1:1014037/1‑150 (MQ=2)
                                                                tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGACGAACAGGT‑CGCTCCGCGCAAAGCCGCCGTCGCCGCGGCGAGTGCCCGCGCCCAAGCCCTCACCCCCGCCCAGCAACAGGCTAAGGCGGAGCCaga                                                                                       >  5:772810/1‑150 (MQ=2)
                                                                  cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTTGAAGCCGCTATTGCCCGCGCGAAGGCGCACAAAGCCGACCAGCAGCAGGGTGATGCGGAGCCcga                                                                                       >  1:1302840/1‑148 (MQ=14)
                                                                  cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGCAAGCGCGCAAACGCGAACAGCACCCGGCTAATGCGGAGCCaga                                                                                       >  7:44353/1‑148 (MQ=17)
                                                                  cccGCGCCACAGCCCGCAAGCTGGAACACCAACAGGCTAATGCCGACCCAGAACAACATCG‑CGATCCGCCCAAAGCCCCAGTCGAAGCCTCTCTTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                                                                    <  6:578549/151‑1 (MQ=25)
                                                                     gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑GGATCCGCGCAAAGCCGCAGAAGCCGCCGCTATTGCCCGCGCCAACGCCCAAAAACGCGCACAGCAGCAGGCTAAACCCGAGCCcgaagacc                                                                                  >  5:1426743/1‑148 (MQ=2)
                                                                     gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTGGAAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACCGGACCAGCAAAAGGGTAAAGACGAGCAAGAAAAAc                                                                                  >  7:1181184/1‑150 (MQ=11)
                                                                       gCCAATGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCCCGCAAACGGGCACAGCACCCGGGTCTAGCGGAGCCAGAAGAACAgg                                                                               >  4:72351/1‑151 (MQ=14)
                                                                       gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGGGCCCAGCACCAGGCTCATCCGGAGCCAGAAGCCCAgg                                                                               >  3:1162609/1‑151 (MQ=14)
                                                                         cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGCGCGAAAGCCAGAAAAGCCGAACAGCACCAGGCTCATCCCGAGCACGAAGACCTGGtt                                                                             >  2:1101331/1‑151 (MQ=2)
                                                                          caaGCCCGCAAGCTGCAACAGCAACAGTTTAATTCGCAACCAGAACAACTCCT‑CGATCCGCGCATACGCTCAGTGGATTCCTCTATTGCCCTATACACAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTg                                                                            <  4:5877/150‑1 (MQ=255)
                                                                              cagggaaccaggAAGAACAACAGGCAAATCCCGACCCAGAACACCTTGC‑GGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATcc                                                                        <  2:1299999/141‑1 (MQ=17)
                                                                               aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTGGCAGCGGCTATTACCCTCGGCAAAGCAAGCAATCTGGGCCAGCAACCGGCTAATGCGGAGCCAGCAGAACATGTAGATc                                                                         >  7:596107/1‑149 (MQ=11)
                                                                                     gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCAAAAGCCAAAAAACCGGACCAGCAACCGAATAAAGAGGTGCAAGAAGAACAGGTTGATcagagaaa                                                                  >  6:1647903/1‑143 (MQ=9)
                                                                                      cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAAAGCCATCAAACCGGAACAGCAACAGGCTAATCCCGAGCAAGAAGAACAGGTAGATCAGCCCaaat                                                                >  5:642814/1‑150 (MQ=11)
                                                                                        ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCCAAAAAACCCGAACAGCAACAGGATAAAGACGAGCCATAAAACCAGATAGCTCCACGCTAAGCt                                                              >  6:84079/1‑151 (MQ=2)
                                                                                          aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAGAAAACCCGAACAGCAACCAACTAATTCGTATACAGAAGAACAGgatgataaactcaaagcagc                                                            >  6:421052/1‑137 (MQ=255)
                                                                                           aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGAGCAAACCCGACCAGCACCAGGGTAAACAGGAGCCAGAAGATCTCGTAGATCAGCGCAAAGCTGcc                                                           >  4:615781/1‑151 (MQ=14)
                                                                                           aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGcc                                                           >  4:1638794/1‑151 (MQ=255)
                                                                                           aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGcc                                                           >  2:1393299/1‑151 (MQ=255)
                                                                                            cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGCACAGCAGCCGGCTAATGCCGAGCCAGAAGAACAGGTTGCTCCGCGCAAACCTGCCg                                                          >  2:47090/1‑151 (MQ=17)
                                                                                             aGCAACAGGCTAATGCGGAACCAGAAGAACAGGT‑CGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCTCGCAAGCGCGACCAGAAGCCGAATAATGGAGCGGAAGAAGAACATCTAGCTCCGCGCaatgaagatg                                                          >  1:685822/1‑142 (MQ=2)
                                                                                             aGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTGGATCCGCGCAAAGCTGCCGt                                                         >  3:1545558/1‑151 (MQ=255)
                                                                                                  cAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCCATAAAACCCGAACAGCACCAGGGTAATACCGAGGCATAAGACCTGGTGGAACAACGCACAGcgccatttgacc                                                    >  1:1525353/1‑140 (MQ=2)
                                                                                                   aGGCTAATGCGGAACCAGAACAACAGGT‑CGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCACGCAAACATCGGAAGAGACACGATAATGCAAAGCCTGAAGCAGAGATTGTTCCTCTCAAAGCTGCCCTCGacg                                                    >  6:591268/1‑148 (MQ=0)
                                                                                                    ggCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGAAACCGCGAACAGCAACAGGCTAATGCGGAGCAAGAAGAACAGGTTGATCAGCGCAAAGcgccagtagcagcg                                                  >  6:219006/1‑138 (MQ=14)
                                                                                                        aaTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGCGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGATCCGCGCAAACCTGCAGTCGAAGCGGCt                                               >  2:980633/1‑150 (MQ=17)
                                                                                                         aTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCAGCAGTAGAAGCGGCTAt                                             >  5:910723/1‑151 (MQ=14)
                                                                                                         aTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACCGGAACAGCAACAGGCTAATGCGGAGCAAGAAGAACAGGTAGATCATCGCAAAGCGGCAGAGTCAGCGGCTAt                                             >  7:229282/1‑151 (MQ=11)
                                                                                                         aTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTAt                                             >  3:702801/1‑151 (MQ=255)
                                                                                                           cccGACCCAGAACCCCATGG‑GGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATGGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTg                                           <  3:1005951/150‑1 (MQ=14)
                                                                                                            ccGCGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCTCAAACGGGAACAGCAACCCGCTAATGACGAGCCAGAAGAACACGTAGATCCGCGCAAAGCAGCAGTAGAAGAGCCTAATGc                                          >  5:265996/1‑151 (MQ=14)
                                                                                                                 ccAGAACAACAGGT‑CGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCGCGCAAACTGGAACAGCAGCACGCAAAAGCGTAGACAAAAGAAAAAGTTGATCCGATAAAAGATGACGTCGAAGAGGCTCTTGCActa                                      >  1:137101/1‑148 (MQ=9)
                                                                                                                  cAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCCgcgc                                    >  8:1579044/1‑151 (MQ=255)
                                                                                                                  cAGAACAACACGG‑CGATCCGCGCAACGCCGCCGTCGAAGCCGGTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACgcgc                                    <  8:270337/151‑1 (MQ=14)
                                                                                                                     aacaacAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTCATCCGAGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCa                                  >  3:725806/1‑150 (MQ=255)
                                                                                                                       caacaGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCaagg                               >  6:279806/1‑149 (MQ=255)
                                                                                                                        aacaGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAACGc                              >  6:1136997/1‑151 (MQ=14)
                                                                                                                         acaGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAACGCTGCAGTTGAAGCGGCTATTGCACGCGCCAAGGcc                             >  5:1466641/1‑150 (MQ=255)
                                                                                                                          caGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCCACGCAc                            >  4:90287/1‑151 (MQ=255)
                                                                                                                          caGCT‑CGATCCGCGCAAAGCCGCCGTACAAGCAGCTATTGCACGACCCAAAGCGCGCAAACCGGAACAGCAAACGTCTAATGCGGATCCAGAATAACACGTTTATCCGAGCAAAGCTGCCGAAGAAGCGGCTATTGCACGAGACAACGCAc                            >  7:31664/1‑151 (MQ=14)
                                                                                                                           aGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAAAGcccc                           >  2:613785/1‑148 (MQ=255)
                                                                                                                            ggT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGc                          >  5:1378480/1‑151 (MQ=255)
                                                                                                                             gT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAacgcacgc                          >  8:1179305/1‑150 (MQ=255)
                                                                                                                                cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa                         >  8:683802/1‑149 (MQ=255)
                                                                                                                                cGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCGAAAGCACGAAAGCACGAACAGCAACAGGATAATGACGAGCCAGAACAACAGTTCGCTACGCGCAAAGCGGCAGTTGAAGCGGATATTGCAAGCGCAAAGGcgagaaa                        >  5:1701231/1‑144 (MQ=255)
                                                                                                                                 gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCCGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCCGCGGCAATTGCCCGCGCCAACCCCCGCAAGc                      >  8:1255779/1‑151 (MQ=14)
                                                                                                                                 gATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAAAGCACGCAACCAGGAACAGCAACAGGATAATGCCGAGCCAGAACAACAGGTCGATCCCCGAAAAGCCGCAGTAGCCGAGCCTATTCCCCGCGCAAAGGccataaaac                      >  7:1602280/1‑143 (MQ=9)
                                                                                                                                  aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                                                                                               <  6:204727/77‑1 (MQ=255)
                                                                                                                                    ccccccacccccgccgccgAAGCCGGTATTGCACCAGCCAAACCCCGCAATCGGCAACAGCAACAGGCTAATGCCGAGCCACACGCAGAGCTTGATACGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg                   <  4:1654454/141‑1 (MQ=9)
                                                                                                                                       cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAAc                >  7:157754/1‑151 (MQ=255)
                                                                                                                                       cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                >  7:641421/1‑151 (MQ=255)
                                                                                                                                        gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGAAAGCTCGacc                >  7:865066/1‑148 (MQ=255)
                                                                                                                                         cccaGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCTCGCAATCTGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCTGCCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg              <  8:234105/148‑1 (MQ=14)
                                                                                                                                         cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGa                                                                           <  2:674673/90‑1 (MQ=255)
                                                                                                                                         cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAACCAACCTGGAAc                >  1:788940/1‑149 (MQ=255)
                                                                                                                                          aaaTCCGCCGGAGAAGCCGCTATTGCCCGAGCCAAAACGGGCAAACGGGTACCGCAACCGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc             <  8:136818/151‑1 (MQ=17)
                                                                                                                                          aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc             >  4:314658/1‑151 (MQ=255)
                                                                                                                                          aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGACCAGc             >  3:1601289/1‑151 (MQ=255)
                                                                                                                                           ccgccgccGTCGCCGCCGCCCATCCCCGCGCCAAAGCGCGCAACCTGTAACATCAACAGGATAATGCGGACCCAGAACAACAGGGAGATCCGCGCAAAGCAGCCGTCGAAGCGTCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa            <  3:1370766/149‑1 (MQ=2)
                                                                                                                                              ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCacc          >  4:1085552/1‑148 (MQ=255)
                                                                                                                                                  cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAACCTCGACCAGCAACAGGCt     >  6:1434729/1‑151 (MQ=255)
                                                                                                                                                   gTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAAACGGCAACAGCAACCGGCTAATGCGGAGACAGAAGAACAGGTAGCTCCGCGCAAATCAGCCGTGGCAGCGCCTATTGCACGCGCACACGCACGAAAGCGGGAGCAGCAGCAGCCt     >  5:1276166/1‑150 (MQ=17)
                                                                                                                                                     cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCACGCAAGCTGGGACAGCAACAGGCTAAt  >  6:916898/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
AACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT  >  NC_000913/1708735‑1709033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑