Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC34.6% 182.0 / 69.8 220R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (110/32);  new base C (64/11);  total (175/45)
Fisher's exact test for biased strand distribution p-value = 2.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 225 total aligned reads displayed.

CCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708752‑1709049
                                                                                                                                                      |                                                                                                                                                    
ccagcagcagatgttgATCCCCGAAAACCTGCCGTAGAAGCAGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAg                                                                                                                                                     <  2:35836/136‑1 (MQ=11)
  ataaaaactgctggATCCACGCAAACGAGCCGTAGAAGCCGCTATTGCCCGTGGCATAGCTCGCAAGCTGGAACATCAACAGCATAATTCCGAGCCAGAACAACAGGT‑GGATCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGc                                                                                                                                                    <  3:10931/137‑1 (MQ=9)
    aagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGGGCCAAAGCCCGCAAGCTCGAACAGCACCAGGCTAATGCCGAGGAAGAACACGAGGT‑CGCTCAGCGCAAAGCCGCCGAGGCCGCCGCGATTGCCCgcgcaac                                                                                                                                                 >  8:654354/1‑148 (MQ=14)
     agaaCAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGT‑GGATCCGCGCAAAGCAGCAGTAGAAGCGGCTATTGCACGAgaaaa                                                                                                                                                 >  6:469285/1‑146 (MQ=11)
       aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgc                                                                                                                                              <  8:1434086/151‑1 (MQ=40)
           ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTGGCAGCGGCTATTGCCCGCGCCAACgcgcgc                                                                                                                                          >  8:1121191/1‑151 (MQ=14)
               gATCCGCGGAAAGCGGCCGTGGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAc                                                                                                                                      <  3:984618/151‑1 (MQ=255)
               gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCAGATCGAAAAACACACGT‑CGATCCAAACAAAGGAGCCGAATAAGAAGATATTGCACGAGcccgagagctaaaa                                                                                                                                       >  5:1439952/1‑138 (MQ=2)
               gATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCACGAGCCCAAGCGCGCaagc                                                                                                                                      >  7:1514291/1‑149 (MQ=14)
                    gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGT‑CGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCCAATGCCCACaacccggcc                                                                                                                                 >  8:1029033/1‑144 (MQ=11)
                     cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCTAAAGCCAGCaaaggcgca                                                                                                                                 >  7:853541/1‑144 (MQ=11)
                      gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGAGCCAACGCGCGCAAACGCGacc                                                                                                                                >  1:1424979/1‑148 (MQ=14)
                        aacagcgccgTCCACGCAGCTAGTCCCCCGGACAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAAGATGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAg                                                                                                                              <  3:303940/145‑1 (MQ=14)
                           cccgcccgcccacccGCAATCGCCCGCCCCAAAGCTCGAAAGCTCGAACACCAAGACCCTACAGCCCACCCACACCAACAGGT‑CTACACTCGCAACGCCTCCGGAGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAAc                                                                                                                          <  8:454191/138‑1 (MQ=9)
                              gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGGGAACAGCaaaagg                                                                                                                       >  5:1749347/1‑147 (MQ=14)
                                cgTCGACGCCGCTAGCGCGCTGGCCGACGCACGCAAGCAGGAACACCTCCAGGCTACTCCCGACGCAGAACCCGAGGG‑CGATCCCCGCAAACCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCt                                                                                                                     <  3:1020945/151‑1 (MQ=9)
                                 gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCCCGCGCGAACGCCCGAAAACGGGAACAGCagaaggct                                                                                                                     >  7:1612375/1‑143 (MQ=14)
                                    gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTGGAAGCCGCTATTGCCCGAGCAAAGGCCCGAAAACGCGACCAGCacaaggcaaaa                                                                                                                  >  6:1578320/1‑140 (MQ=14)
                                     aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCAGATCCAAAAAAACACGT‑GGATCCGAACAAAGAAGCCGTATAAGAAGCTATTGCACGAGCCAAAGAACGAAAAATGGAACAGCAACCGGCTAATgg                                                                                                                >  7:708567/1‑150 (MQ=2)
                                      aGCCGCTAATGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGAGGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                                                                                                               <  3:453865/151‑1 (MQ=255)
                                            tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAA‑AGATACGAACAGCGAAAAGAAGCCATAGAATCGACTCTTGACAGAACCAAAGCGAGCAAGCCGTAACATAAAAAAAATAATGCGGAGcc                                                                                                          >  1:1014037/1‑150 (MQ=2)
                                                gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑GGATCCGCGCAAAGCCGCAGTGGAAGCGGCTATTGCCCGCGCGCACGCCAGAAAACGGGAACAGCAGCAGGCTGATCCGGAGGCagaa                                                                                                      >  8:77706/1‑150 (MQ=14)
                                                 cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCCAACAAACCCGACCAGCACCAGGATAAAGACGAGCAaga                                                                                                       >  5:924058/1‑148 (MQ=2)
                                                      gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGGGCCCAGCACCAGGCTCATCCGGAGCCAGAAGCCCAgg                                                                                               >  3:1162609/1‑151 (MQ=14)
                                                        cAAAGCTCTCAAGCTGTAAGAGCAACAGGCTAATGACGACCAAGAACAACAGTT‑CGAGCCGCGCATAGCCGCCGTCGATGCCGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGtt                                                                                             <  7:1539041/151‑1 (MQ=255)
                                                         caaGCCCGCAAGCTGCAACAGCAACAGTTTAATTCGCAACCAGAACAACTCCT‑CGATCCGCGCATACGCTCAGTGGATTCCTCTATTGCCCTATACACAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTg                                                                                            <  4:5877/150‑1 (MQ=255)
                                                              aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTGGCAGCGGCTATTACCCTCGGCAAAGCAAGCAATCTGGGCCAGCAACCGGCTAATGCGGAGCCAGCAGAACATGTAGATc                                                                                         >  7:596107/1‑149 (MQ=11)
                                                              aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGCGACCAGCAGCCGGCTCATACGGAGCCagaacaccacgtgacaca                                                                                        >  5:1393873/1‑136 (MQ=14)
                                                                gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAAACGGGCACAGCAACAGGCTAATGAGGAGCCAGAAGACCAGGTTCAACcgcg                                                                                     >  2:176655/1‑151 (MQ=14)
                                                                  aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCgcgc                                                                                    >  2:1082243/1‑150 (MQ=255)
                                                                     cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAAAGCCATCAAACCGGAACAGCAACAGGCTAATCCCGAGCAAGAAGAACAGGTAGATCAGCCCaaat                                                                                >  5:642814/1‑150 (MQ=11)
                                                                       ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCCCAAACCGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGCTAGAACCCCCCAACGCt                                                                              >  7:463819/1‑151 (MQ=11)
                                                                       ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCCAAAAAACCCGAACAGCAACAGGATAAAGACGAGCCATAAAACCAGATAGCTCCACGCTAAGCt                                                                              >  6:84079/1‑151 (MQ=2)
                                                                         aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑AGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAGAAAACCCGAACAGCAACCAACTAATTCGTATACAGAAGAACAGgatgataaactcaaagcagc                                                                            >  6:421052/1‑137 (MQ=255)
                                                                          aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGAGCAAACCCGACCAGCACCAGGGTAAACAGGAGCCAGAAGATCTCGTAGATCAGCGCAAAGCTGcc                                                                           >  4:615781/1‑151 (MQ=14)
                                                                           cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGCACAGCAGCCGGCTAATGCCGAGCCAGAAGAACAGGTTGCTCCGCGCAAACCTGCCg                                                                          >  2:47090/1‑151 (MQ=17)
                                                                            aGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCTGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATCCGGTCCCAGAAGCAGAGGTTGATCCGCGCAAAGCGGCAGt                                                                         >  3:1492030/1‑151 (MQ=11)
                                                                                aCAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGGGAACAGCAACAGGCTAAAGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGa                                                                      >  6:1117451/1‑150 (MQ=14)
                                                                                 cAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGAACAGCAACAGGCTAATCCGGTCCCAGAAGAAAAGGTTGATCCGCGCAAAGCTGCAGTAGa                                                                      >  7:1592379/1‑149 (MQ=14)
                                                                                  aGGCTAATGCGGAACCAGAACAACAGGT‑CGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCACGCAAACATCGGAAGAGACACGATAATGCAAAGCCTGAAGCAGAGATTGTTCCTCTCAAAGCTGCCCTCGacg                                                                    >  6:591268/1‑148 (MQ=0)
                                                                                   ggCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCg                                                                  >  8:328843/1‑151 (MQ=255)
                                                                                     cTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGc                                                                >  2:1640659/1‑151 (MQ=255)
                                                                                     cTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTCCAGTCGCAGCGGc                                                                >  3:732028/1‑151 (MQ=255)
                                                                                       aaTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCAAAAGGATAAAGCGGAGCCAGAAGAACAGGTTGATCCCCGCAAAGCTGCAGtacccgcggct                                                               >  5:1511624/1‑140 (MQ=14)
                                                                                       aaTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTTGATACCCGCACAGCAGCAGTCGAAGCgccg                                                               >  2:1216302/1‑147 (MQ=14)
                                                                                       aaTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGCGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGATCCGCGCAAACCTGCAGTCGAAGCGGCt                                                               >  2:980633/1‑150 (MQ=17)
                                                                                        aTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTAt                                                             >  3:702801/1‑151 (MQ=255)
                                                                                        aTGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGACGCGGCGAt                                                             >  8:1678649/1‑151 (MQ=255)
                                                                                          cccGACCCAGAACCCCATGG‑GGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATGGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTg                                                           <  3:1005951/150‑1 (MQ=14)
                                                                                           ccGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCCGCGGCTATTGc                                                          >  4:701986/1‑151 (MQ=14)
                                                                                           ccGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGc                                                          >  2:1315936/1‑151 (MQ=255)
                                                                                            cGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATACGCGCAAAGCTGCCGTCGCAGCGGCTATTGc                                                          >  8:1717231/1‑150 (MQ=255)
                                                                                             gAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATCCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCAc                                                        >  4:1651588/1‑151 (MQ=255)
                                                                                             gAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCAc                                                        >  4:109565/1‑151 (MQ=255)
                                                                                              aGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCAATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATACGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGcccc                                                       >  7:1685033/1‑148 (MQ=14)
                                                                                                 cAGAACAACACGG‑CGATCCGCGCAACGCCGCCGTCGAAGCCGGTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACgcgc                                                    <  8:270337/151‑1 (MQ=14)
                                                                                                    aagaacaGGT‑CGATCCGCGCAAAGCCGCAGTGGAAGCCGCTATTGCCCGAGCAAAAGCCAGCAAACACGAACAGCAACCGGCGAATGGCGAGGCAGAACAACAGGTAGATCCTCGCAAAGCGGCAGTGGCGGCGGCTATTGcgagagcga                                                  >  6:1644259/4‑142 (MQ=2)
                                                                                                    aacaacAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGCACAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCGCCCGTAGCCGCGGCGATTGCCCGCGCCa                                                  >  5:776845/1‑150 (MQ=14)
                                                                                                    aacaacAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCTCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAAGTAGATCCGCGCAAATCTGCCCTAGCAGCGGCTATTGCACgcgcaa                                                  >  1:429133/1‑148 (MQ=14)
                                                                                                     acaacaGCT‑CGATCCGCGCACAGCCGCCGGCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa                                                <  2:231829/151‑1 (MQ=255)
                                                                                                      caacaGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCaagg                                               >  6:279806/1‑149 (MQ=255)
                                                                                                      actcgttgctgATCCTCGGAAATCCGCCGTTGTAGCAGCTATTTCCCGTGCCTAATCTCGCAATCTGGAAGATCAACAGGCTATTTCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa                                                <  5:242297/141‑1 (MQ=12)
                                                                                                            gT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAacgcacgc                                          >  8:1179305/1‑150 (MQ=255)
                                                                                                            gT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCAGCAGTAGAAGAGGCTATTGCACGCGCCAAAGCAcaa                                          >  6:544598/1‑148 (MQ=14)
                                                                                                               cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCCAAGGCACGaaac                                       >  1:751846/1‑150 (MQ=255)
                                                                                                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCCGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCCGCGGCAATTGCCCGCGCCAACCCCCGCAAGc                                      >  8:1255779/1‑151 (MQ=14)
                                                                                                                 aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                                                                                                               <  6:204727/77‑1 (MQ=255)
                                                                                                                 aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCCAAGCACGCAAGcc                                     >  1:261068/1‑150 (MQ=255)
                                                                                                                   ccccgcAAATCCGCCTTTGAAGTATCTATAGCCCGAGCCAATGCTCGCAAACTTGAACATCAACAGTTTAATTCGTAGACTGTATTACTCTTTGATCCCCGCAAATCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                     <  5:1076542/146‑1 (MQ=255)
                                                                                                                      cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCCCGCAAGCTggccc                                >  2:605322/1‑148 (MQ=255)
                                                                                                                      cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                >  7:641421/1‑151 (MQ=255)
                                                                                                                       gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACTCCGAACGGCTACTGCGGAGGCAGAAGAAGAGGTAGATCAGATCAAATCGGCCGTCGAAGCAGCAATTAAAAGAGACAAAGCGCGCAAGCTggcgcg                               >  6:1652642/1‑147 (MQ=2)
                                                                                                                       gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                >  7:334849/1‑150 (MQ=255)
                                                                                                                        cccaGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCTCGCAATCTGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCTGCCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg                              <  8:234105/148‑1 (MQ=14)
                                                                                                                        cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGacc                                >  2:1003576/1‑147 (MQ=255)
                                                                                                                        cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAAc                                >  2:615133/1‑149 (MQ=255)
                                                                                                                         aaaTCCGCCGGAGAAGCCGCTATTGCCCGAGCCAAAACGGGCAAACGGGTACCGCAACCGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                             <  8:136818/151‑1 (MQ=17)
                                                                                                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                             >  4:314658/1‑151 (MQ=255)
                                                                                                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGACCAGc                             >  3:1601289/1‑151 (MQ=255)
                                                                                                                          ccgccgccGTCGCCGCCGCCCATCCCCGCGCCAAAGCGCGCAACCTGTAACATCAACAGGATAATGCGGACCCAGAACAACAGGGAGATCCGCGCAAAGCAGCCGTCGAAGCGTCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa                            <  3:1370766/149‑1 (MQ=2)
                                                                                                                                 cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATGCGGAGCCagaa                                                                                                      >  7:1283107/1‑70 (MQ=255)
                                                                                                                                 cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAACCTCGACCAGCAACAGGCt                     >  6:1434729/1‑151 (MQ=255)
                                                                                                                                 cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGACAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAACCACGAACAGCAAAAGGCt                     >  7:282363/1‑151 (MQ=17)
                                                                                                                                 cgTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGAAAACGCGAACAGCAACAGGCAAATACCCAGCCAGAAGAACAGCTAGATCCGCGCAAAGCTGCCGTCGACGCGCATAGTGCACGAGCAAAAGAAAGCAATCTAGAACAGCACCAGGCt                     >  1:1304589/1‑151 (MQ=9)
                                                                                                                                  gTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAAACGGCAACAGCAACCGGCTAATGCGGAGACAGAAGAACAGGTAGCTCCGCGCAAATCAGCCGTGGCAGCGCCTATTGCACGCGCACACGCACGAAAGCGGGAGCAGCAGCAGCCt                     >  5:1276166/1‑150 (MQ=17)
                                                                                                                                    cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCACGCAAGCTGGGACAGCAACAGGCTAAt                  >  6:916898/1‑151 (MQ=255)
                                                                                                                                      aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGCACGCACGCAAGCTGGACCAGCACCAGGCTAATGc                >  4:764699/1‑151 (MQ=255)
                                                                                                                                      aaGCCCCAATTGCCCCAGCCAAAGCTCTCAAACGCGAACACCAACAGCCTAATGCGGATCAAGAACAAGACGTTGATCCGCGCAAACCTGCCCTCTAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                <  3:710373/151‑1 (MQ=14)
                                                                                                                                           gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCAAAAGCACGCAAGCAGGAACAGCAACACGCTAATGCGGTAc           >  5:1241070/1‑151 (MQ=255)
                                                                                                                                           gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc           >  1:816133/1‑151 (MQ=255)
                                                                                                                                           gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc           >  3:507550/1‑151 (MQ=255)
                                                                                                                                             tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCACGCAAGCTCGCACAGCAACAGGCTCATGCGGTAcc          >  1:1029861/1‑150 (MQ=255)
                                                                                                                                             tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCCCGCAAGCTCGACCAGCACCAGGCTAATGCGGTAcc          >  4:1660167/1‑150 (MQ=255)
                                                                                                                                             tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc          >  3:195759/1‑150 (MQ=255)
                                                                                                                                              aTTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCCCGCAAGCTGGAACAGCAAAAGGATAATCAGGTACCac        >  7:1742054/1‑150 (MQ=25)
                                                                                                                                                cgCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCagaaga                                                                                                    <  4:924542/56‑1 (MQ=11)
                                                                                                                                                  cccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCCAAGCCCGCAAGCTGGACCAGCACAAGGCTAATGCGGTGCCata       >  5:287712/1‑146 (MQ=25)
                                                                                                                                                    cGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCAAGCAAGCTGGCACAGCAACAGGCTAATGCGGTACCAGCCGAAc  >  2:157302/1‑151 (MQ=255)
                                                                                                                                                      aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCAGAAGAAc  >  5:1531246/1‑149 (MQ=255)
                                                                                                                                                      aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTCCCAGAAGAAc  >  7:932162/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGT‑CGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708752‑1709049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑