Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,4650T.26.1% 385.7 / 152.1 158intergenic (+2/‑32)metZ/metWtRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base T (29/87);  new base . (3/38);  total (32/126)
Fisher's exact test for biased strand distribution p-value = 1.40e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.09e-02

Only 100 of 173 total aligned reads displayed.

TGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGG  >  NC_000913/2947315‑2947612
                                                                                                                                                      |                                                                                                                                                    
tGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAt                                                                                                                                                      >  2:806106/1‑151 (MQ=255)
tGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAt                                                                                                                                                      >  2:930922/1‑151 (MQ=255)
 gCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                     <  7:1738514/151‑1 (MQ=255)
 cccAAATGCGTGATCGGGGTAAAAAAAAGGTTGAATGAAAACTCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                     <  5:1107572/150‑1 (MQ=255)
 cccAAATCCCTGATCGGCGTAAAAACAAGGCTCAAGGAAAACGCGAGCGCAGTATATAGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtc                                                                                                                                                     <  4:76560/150‑2 (MQ=18)
  ccAATTCGGTGAGCGGGTTAAAAAAAAGGTTGCATTAAAAGGCGAGGGGAGAATAGTGCGCTTCCACGGAGGCGGGGTGGAGCAGCCGGGTAGCTGGTCGGGGTCAT‑ACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaa                                                                                                                                                   <  8:1583447/151‑1 (MQ=18)
  ccAAATCCGTGATCGGGGTAACAAAAAGGTGGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                    <  4:87874/151‑1 (MQ=255)
  ccAAATCCGTGATCGGGGTAAAACAAAGGTGGCATGAAAACGAGAGCGGAGTATACTCCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtca                                                                                                                                                    <  8:46696/151‑3 (MQ=21)
  ccAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                    <  2:63742/151‑1 (MQ=255)
   cAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTat                                                                                                                                                   >  8:1357220/1‑150 (MQ=255)
     aaTGCGTTATCGTGGTAAAAAAAAGGTTGCATGAAAAATATATCGCAGTATATTGCGCATACCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaat                                                                                                                                                 <  1:1170793/151‑2 (MQ=17)
     aaTCGGTGATCGGCTTAAAACCAAGCTTGAATGAAAACCAGAGCGGAGTATACTCCGCATCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaat                                                                                                                                                 <  3:1515395/151‑2 (MQ=17)
     aaTCCGTTCTCGGGGTAAAAAAAAGGTTGCATGAAAACTATATCGGAGTATAGTGCGCATACACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                                                 <  5:928633/151‑4 (MQ=18)
     aaTCCGTTATCGGGTTAAAAAAAAGGTTGCATGAAAACTCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaat                                                                                                                                                 <  6:1708642/151‑2 (MQ=255)
     aaTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaaaa                                                                                                                                                 <  8:1395360/151‑1 (MQ=255)
      aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                                                <  3:525917/151‑1 (MQ=255)
      aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCAGGCCCCCGCAACCAATTAAAAt                                                                                                                                                <  7:349323/151‑1 (MQ=255)
        gggTGATGGTGCTAACAAAAAGGTTGAATGAAAACTCGAGTGGAGTAGACTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAtttg                                                                                                                                              <  7:1650049/149‑2 (MQ=17)
        gcGTGATCGGGGTAAAAAAAAGGTTCAATGAAAAAGCGAGGGGAGTATAGTGCGCATCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAtttg                                                                                                                                              <  4:212893/150‑2 (MQ=18)
        ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGTTAGCGCTGCGGGCTCATAACCCGAAGGGCGGCGGTGCAAATCCGCCCCCCCCAACCAATTattcaa                                                                                                                                               >  2:1018957/1‑145 (MQ=255)
         ggTGATCGGGGTAAAAAAAAGGGTGCAGGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtga                                                                                                                                            <  2:257132/150‑1 (MQ=255)
          gTGATCGGGGTAACAACACGGTTGAATGAAAACTCTAGTGGAGTATAGTGCGCCTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                                           <  8:630844/151‑1 (MQ=17)
           tGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacacc                                                                                                                                           >  1:1311420/1‑142 (MQ=255)
            gatggtgttAAAAGAAAGGGTGCATGAAATATCTAGCGCAGTATAGACCGCCTCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgatg                                                                                                                                          <  3:1350336/142‑1 (MQ=11)
            gATCGTGGTAAAAAAAAGGTTGAATGAAAAATCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccc                                                                                                                                          <  7:1227513/151‑11 (MQ=18)
            gATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatg                                                                                                                                          <  2:1477155/151‑1 (MQ=255)
            gATCGGGGAAAAAAAACCGCTGCATGAAAACGCGAGCGGAGTAGACTCCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                                           <  3:527303/149‑1 (MQ=17)
             aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatga                                                                                                                                         <  8:208280/151‑1 (MQ=255)
             aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatga                                                                                                                                         <  6:1177512/151‑1 (MQ=255)
             aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtgatga                                                                                                                                         <  5:407015/151‑1 (MQ=255)
              gcGGGCTAAAAAAAACGTTGCATCAAAACGCCAGCGGAGTATAGTCCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAg                                                                                                                                       <  3:730785/150‑1 (MQ=17)
               ggggtTAAAATAAAGGTTGCATGAAAACGCGAGCGTAGTATAGTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccctaa                                                                                                                                       <  5:853152/150‑14 (MQ=17)
               ggggtTAAAAATAAGGATGCATGAAAACTCGAGCGGAGAATATTGCGCATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGt                                                                                                                                      <  2:203689/150‑1 (MQ=17)
               cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgatcaccctac                                                                                                                                       >  8:1431684/1‑138 (MQ=255)
               cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaaccta                                                                                                                                        >  5:1225890/1‑138 (MQ=255)
               cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGaa                                                                                                                                        <  1:391607/150‑1 (MQ=255)
               cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGaa                                                                                                                                        <  7:858031/150‑1 (MQ=255)
               cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAg                                                                                                                                       <  8:560050/151‑1 (MQ=255)
                ggggTAAAAAAACGGCTGCATGAAAACCCCAGCGGAGTATACTCCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑a                                                                                                                                    <  3:1072169/151‑1 (MQ=17)
                gggcTAAAAAAAACGGTGCATCAAAAACCGAGAGGAGTATAGTGCGCATCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑a                                                                                                                                    <  8:1240812/151‑1 (MQ=14)
                 ggtaaaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑a                                                                                                                                    <  2:915320/147‑1 (MQ=255)
                 gggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccctaaac                                                                                                                                     >  5:485793/1‑136 (MQ=255)
                  gctAAAATACAGCTTGCATGAATAAGCGAGCGCAGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaa                                                                                                                                  <  8:110579/149‑1 (MQ=14)
                   gTAAAAAAACGCTGGCATGAAAAAGCGAGAGATGAATACTCCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaa                                                                                                                                 <  8:1038746/151‑2 (MQ=11)
                   gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                                  <  4:252587/151‑1 (MQ=255)
                   gTAAAAAAAAGGGTGCATGAATACCCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaa                                                                                                                                 <  6:1003628/151‑2 (MQ=17)
                    tAAAAAAAAGGTTGCATGAAAACGCTAGCGGAGTATAGTCCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaa                                                                                                                                 <  8:25693/150‑2 (MQ=255)
                    aaaaacaaaGGCTGAATGAATACCAGATAGTAGTATATTGCGCATACCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaag                                                                                                                                <  5:382297/150‑3 (MQ=1)
                     aaaaaaaaGGTTGCATGAAAACGCGAGCGTAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagc                                                                                                                               <  6:1374503/151‑4 (MQ=255)
                     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                                 <  5:28962/150‑1 (MQ=255)
                       aaaaaaGGGTGAATGAAAAACCCAGGGTAGTATAGTCCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagcag                                                                                                                             <  1:1567372/151‑6 (MQ=11)
                        aacaaGGGTGAATGAAATAGCCATCGGAGTAGAGTCCGACTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGt                                                                                                                             <  8:391640/148‑1 (MQ=11)
                         aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                                            <  4:565105/151‑1 (MQ=255)
                          aacgggtGCATGAAATATCGATCGGTGTAGTGAGCGATTCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGGCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTAc                                                                                                                           <  4:183795/145‑1 (MQ=11)
                          aaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTAc                                                                                                                           <  1:1696085/151‑1 (MQ=255)
                          aaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTAc                                                                                                                           <  7:314795/151‑1 (MQ=255)
                          aaaGGTTGCATGAAAAAGAGAGCGGTGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTAc                                                                                                                           <  1:1028983/151‑1 (MQ=14)
                             ggTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGt                                                                                                                        <  6:1639750/151‑1 (MQ=255)
                              ggtGCACGAAATCGCGATCGTAGTATAGTGGGCTTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTg                                                                                                                       <  2:1517835/149‑1 (MQ=11)
                                tGCATGAAAACTCTAGTGTTGTATTTTGCGCATCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGa                                                                                                                      <  6:575058/150‑1 (MQ=11)
                                tGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGa                                                                                                                      <  2:1179951/150‑1 (MQ=255)
                                tGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTAGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TAAAATTTTATTAAGt                                                                                                                                      >  5:817232/1‑134 (MQ=255)
                                ggCAGGAAAACGCGTGGGGAGTATTGTTCGCCTCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAc                                                                                                                     <  2:1584724/150‑1 (MQ=11)
                                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAATTTACATCAACA‑AGCGCAGTACTGTGAcg                                                                                                                    >  3:103107/1‑151 (MQ=18)
                                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcg                                                                                                                    <  7:1020801/151‑1 (MQ=255)
                                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcg                                                                                                                    <  8:1291116/151‑1 (MQ=255)
                                  cATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcgc                                                                                                                   <  2:1740116/151‑1 (MQ=255)
                                   atgaaaaatcttgCGGAGTATAGTCCGACTCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgcg                                                                                                                  <  2:1743734/139‑1 (MQ=11)
                                   aTGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcgcg                                                                                                                  <  8:1501173/151‑1 (MQ=255)
                                     gAAAACCCGTGGGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCgg                                                                                                                 <  6:256442/150‑1 (MQ=11)
                                     caatactagtgtggAGTATAGTGCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCggg                                                                                                                <  1:436864/139‑1 (MQ=11)
                                      aaaaCTCGAGCGGAGTATAGTGGGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCgggg                                                                                                               <  4:751870/151‑1 (MQ=14)
                                       aatggcgATCGGAGTATTGTTCGCATGCAGGGTCGCGGTGTTTAGGAGGCTGGTAGCTGGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCGGGCCCGCGCATGCAATTTAAATTTGATGAAGT‑ATAGCTGTAGGGTGAGGGGGGGt                                                                                                              <  5:1667558/147‑1 (MQ=9)
                                       aaaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGt                                                                                                              <  4:1405813/151‑1 (MQ=255)
                                        taCGCTAGCGGAGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                    <  4:1406145/112‑1 (MQ=255)
                                        aaCGGGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTGGTCGGTTCAAATCCGGCCCCCTCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTg                                                                                                             <  3:700546/151‑1 (MQ=255)
                                         aCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacacccta                                                                                                                                        <  1:1470071/124‑13 (MQ=255)
                                          ctcgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaa                                                                                                                                                  <  1:90771/111‑1 (MQ=255)
                                          cgcgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaa                                                                                                                                                  >  8:90675/1‑113 (MQ=255)
                                           tcctgCGGAGTATAGTGCGCATCCAGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcg                                                                                                                    <  3:1704502/137‑1 (MQ=11)
                                            cgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacac                                                                                                                                            <  6:142340/117‑9 (MQ=255)
                                            cgAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacac                                                                                                                                            >  4:142604/1‑109 (MQ=255)
                                              aGCGGAGTATAGTTCGCATCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCTGTCTCATAACCCGAAGGTCGTCGGTTCAAATACGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagcag                                                                                                       <  6:202412/151‑1 (MQ=255)
                                              aGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTGGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagcag                                                                                                       <  3:968020/151‑1 (MQ=255)
                                                cGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAtt                                                                                                                                                     >  1:1233954/1‑104 (MQ=255)
                                                   aGTATAGTGCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtga                                                                                                                                            <  5:1515982/109‑1 (MQ=255)
                                                   aGTATAGTGATAATCCACTGAAGAGTGGTGGAGCAGCCTGGTCGCTCTTCGGTCTAATAAGCCTAAGGTGGTCGGTTCAAATACGTACCCCGCAAACAATTAAACTTTGATGAAGT‑AAAGCAGTACTGTGACGCGGGGTGGAGCAGCCTgg                                                                                                  <  5:619657/151‑1 (MQ=9)
                                                   aGTAGAGTGCTCATCCACTGAATCTGTTTGGTTTAGCGTGTTAGCTTGTGGCTCTCATAACCCGAATCTCGGCGGTTGATATCCTGCCCCCGGAACCAATTAACCTTTGATGAAGT‑CAACCACTACCCTGACGCGGGGTGGAGCAGCCTg                                                                                                   <  1:695891/150‑1 (MQ=9)
                                                    ttttaggtcgcATCCTCCGACGAGGTGTGGATCAGGGTGGTAGCTCGTCGGTATCATAACCCGAATGTCGTCGGTTGAAATCATGCCCGGGCAACCAAATAAAATTTGATGAAGT‑AAAGCACTACGGTGACGCGGGGTGGAGCAGCCTgg                                                                                                  <  4:314521/142‑1 (MQ=9)
                                                      attgTGCTCATCCACGGAAGCTGGGTGGAGCAGCCTGGTAGCTCGTCGGGATCATAAGCCGAATTGCGTCGGGTCAAATCAGTCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCACTACGGTGACGCGGGGTGGAGCAGCCTGGTa                                                                                                <  4:1156151/147‑1 (MQ=17)
                                                             gcATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                    >  3:1224797/1‑92 (MQ=40)
                                                                  cACGGACGAGGGGTGGAGCAGGCTGGTATCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCTAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTc                                                                                   <  3:975763/151‑1 (MQ=255)
                                                                                                             aaCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaatt                                                                                                                                                 >  7:821388/1‑45 (MQ=14)
                                                                                                                            ggTTCAAATCCGGCCCCCGCAACCAATTAAATTTTGATCAAGT‑AACGCAGTACGGTGACGCGGGGTGTAGCAGCCTGGTAGCTCGTCGGGCTCATGACCCGAAGGTCGTCGGTGGAAATCCGGCCCCCGCAACCAAtgatagtagaccctc                         >  8:573373/1‑137 (MQ=11)
                                                                                                                                 aaaTACTGCCGCCGGAATCAATTAAAATTTGATGAATT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTaaaa                    <  7:686573/151‑1 (MQ=17)
                                                                                                                                   aTCCGGCCCCCGCAACCAATTAAAATTTTTTTAATT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCgg                                                     <  5:703211/116‑1 (MQ=255)
                                                                                                                                   aTCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCgg                                                     >  2:705000/1‑116 (MQ=255)
                                                                                                                                                aaCGAATTATATTTTGTTGAAGT‑TTCGCATTACGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgc     <  1:283879/151‑1 (MQ=14)
                                                                                                                                                   cAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGCTCGTCGCTTCAAATCCGGCCCCCGCAACCAATCAAATAAGAAGAACAAAAAGCAGTAATGTGACGAggg  >  7:390548/1‑151 (MQ=17)
                                                                                                                                                     aTTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGccccc                                                >  2:1619163/1‑103 (MQ=39)
                                                                                                                                                      |                                                                                                                                                    
TGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGG  >  NC_000913/2947315‑2947612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑