Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,287,2170GT23.7% 658.3 / 136.9 356intergenic (‑41/+27)tpr/tyrVprotamine‑like protein/tRNA‑Tyr
Reads supporting (aligned to +/- strand):  ref base G (126/141);  new base T (50/33);  total (178/178)
Fisher's exact test for biased strand distribution p-value = 4.43e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 361 total aligned reads displayed.

GGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTG  >  NC_000913/1287067‑1287367
                                                                                                                                                      |                                                                                                                                                       
ggtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCGCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTg                                                                                                                                                         <  1:427943/151‑1 (MQ=37)
     ggggggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAg                                                                                                                                                    <  4:695622/150‑1 (MQ=40)
        gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAATGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGttg                                                                                                                                                 >  5:1333547/1‑150 (MQ=255)
             ggATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGa                                                                                                                                            <  5:513847/151‑1 (MQ=255)
              gATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGGTTCGGTGGGAAGTTGAgggcc                                                                                                                                           >  5:859271/1‑149 (MQ=255)
                    tCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCCACGCGCTCTCGCTGGCGCTCGCGGCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCCTGGGCAGAAGATTTAATTGCCGCTTCGTTGGGAAGTTCAGGGTCTTTTgg                                                                                                                                     >  6:1091813/1‑150 (MQ=14)
                      aGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGaaa                                                                                                                                   <  8:447286/151‑1 (MQ=255)
                        cgcgGCGCCCATCGCCCCTCGGGGCGTTGCCTGCGGCAAATCTCTCTCGCTCGCGCTCGAGCCGACCCGTGCTTGATTGTTGTGATCTTTGCCGGGTTGTCTAGAATTTTTTATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGt                                                                                                                                 <  6:454285/151‑1 (MQ=9)
                                gcTTCGCCCTTCGGGTCGTTGGCTGGGGCGACCCTCTGTAGGGGGCGCGGGCGGGGGAACTTGGTCGAAGCTTATAATAATTACCCCCAAGGGGAGAAAATTTTATTTGGGCTTTGTTTGGAAGTTGAGGGGCTTTTGTAAGTGTtggtgg                                                                                                                         >  5:566398/1‑151 (MQ=9)
                                  ttCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGAtggtggtg                                                                                                                       >  2:169064/1‑151 (MQ=255)
                                   tCGCCCTTCGGGTCGTTGCCTGCGGCTAGGCTCTCTCGCTGTCGGTCGAGTCGAACCTTGGTCGAAGCTTCTCATGCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGTAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                        <  8:800364/149‑1 (MQ=14)
                                   tCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAATTTCAGGGACTTTTGAAAGTGAtggtggtg                                                                                                                       <  1:1492992/150‑1 (MQ=255)
                                     gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCAGAATATTTAATTGCGGATTGGTTGGGAAGGTAAGGGGCTTTTGAAAGTGATGGTGgggggg                                                                                                                    >  8:1196391/1‑151 (MQ=14)
                                       ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGTCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGa                                                                                                                  <  2:794790/151‑1 (MQ=255)
                                        cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAgg                                                                                                                                              <  2:691173/122‑1 (MQ=255)
                                               tCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCg                                                                                                          >  2:393460/1‑151 (MQ=255)
                                                cGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTAGTAGAAAATTCACAACATTACCCGAATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTAAGGTAATTTTAAAAGTGATGGTGGTGGGGGAAGGATTCgt                                                                                                         >  3:979576/1‑150 (MQ=14)
                                                         cGGCAACGCTCTCTCGCTGGCGCTCTAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGTTTGTAATTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaa                                                                                                <  3:727365/151‑1 (MQ=14)
                                                         cGGCAACGCTCTCTCGCTGGCGCTCCAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAg                                                                                                                                  <  2:1499617/117‑1 (MQ=255)
                                                           gCAACGCTCTCGCGCTGGCGCTCCAGTCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaatt                                                                                              <  5:610379/151‑3 (MQ=255)
                                                                gCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGAtggtg                                                                                                                          >  2:1203546/1‑118 (MQ=255)
                                                                 ctctctCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCTAAGTCGATgc                                                                                        >  6:1475002/1‑150 (MQ=11)
                                                                 ctctctCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACCAGCGCAGTCGATgc                                                                                        >  8:843813/1‑150 (MQ=14)
                                                                  tctctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGTAAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                        <  1:1437095/118‑1 (MQ=255)
                                                                     ctcGCTGTCGCTCGAGGCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGTATGGGCAGAATATTTAATTGCGGATTCGTTGGGCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACg                                                                                      <  5:1529735/149‑1 (MQ=255)
                                                                      tcGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATCGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGCGGGAAGGATTCAAAAATTCGAAGAAGATCACgca                                                                                    >  4:944543/1‑148 (MQ=17)
                                                                        gCTGCCGCTCGAGGCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGa                                                                                 <  8:1269662/151‑1 (MQ=255)
                                                                        gCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGACCCTTCGAAGTCGATCACGGCAgc                                                                                 >  2:273912/1‑150 (MQ=11)
                                                                          tgacgcTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGACCCTTCGAAGTCGAtcccgcgagagt                                                                               >  7:942435/4‑140 (MQ=11)
                                                                          tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGAtt                                                                               >  7:471585/1‑151 (MQ=255)
                                                                           ggCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGAttt                                                                              >  6:1195207/1‑151 (MQ=255)
                                                                            ccgcTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTTGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTa                                                                             <  4:1383905/150‑1 (MQ=255)
                                                                            acgcTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACCATCTAAGACGATCACCGCACAttt                                                                              >  2:954519/2‑150 (MQ=14)
                                                                             cgcTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATAACAATCGAAGTAGATCACGCAAGAttaa                                                                             >  3:343732/1‑148 (MQ=17)
                                                                                tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAAACTTCGAAGACCATGACGGAACATTTACatt                                                                         >  2:1312168/1‑149 (MQ=11)
                                                                                 cGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACCCTTCGAAGTCCATGACGGCAGATTTACAGTc                                                                        >  4:48697/1‑151 (MQ=255)
                                                                                 cGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATCCCGGCAGATTTACAGTc                                                                        >  4:1443593/1‑151 (MQ=14)
                                                                                  gAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACATTCGAAGTCGATGACGGCAGATTTACAGTCt                                                                       >  6:384726/1‑151 (MQ=255)
                                                                                  gAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGTTGGCCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCt                                                                       <  3:598902/151‑1 (MQ=255)
                                                                                    gccGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGTTTGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGc                                                                     <  3:1470290/149‑1 (MQ=255)
                                                                                     tCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGTGATGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACAGTCTACGTCGATGACGGGAGCTTTAGATTCTggt                                                                    >  5:464455/1‑149 (MQ=17)
                                                                                     tCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATAACTATCTAAGTACATGACGCCTGATTAAAAGTCTGc                                                                     >  4:1543898/1‑150 (MQ=17)
                                                                                       gAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTTCGGATTCGTTGTGAAGTTAAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACCTTCGAAGTCGATGACGGAAGATTAAAATTCTTCTcc                                                                  >  1:811048/1‑151 (MQ=18)
                                                                                       gAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTACCAATCGAAGAAGATGACCCAAGATTAACATTCATCTcc                                                                  >  1:1005689/1‑151 (MQ=14)
                                                                                        aaCCTTGGTCGAAGCTTCTCATCCTTCCCCGAATGGTCAGAAAATTTAATTTCTGATAACTTGGGAAGTTCAGGGACTTTTTAAAGTTATGGTGGTGGGGGAATGATTCTAAGCTTCGAATTAGATAAAGAAAGATTTAGAGTCTGCTgcc                                                                 >  4:1309513/1‑151 (MQ=12)
                                                                                             ttgTCGAATATTCTCTTTCTTTCCCGGATGGTCTTAATATTTGATTGCGGATTCGTTTGTTATTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCttt                                                              <  4:56783/147‑1 (MQ=18)
                                                                                             tGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGGTTGGCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCttt                                                              <  8:56698/149‑1 (MQ=255)
                                                                                              ggTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGc                                                           <  4:116984/151‑1 (MQ=255)
                                                                                              agTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCCAAACATCGAAGTCCATCACCGAACATTTACAGTcaagatcgaaagac                                                           >  4:773293/2‑138 (MQ=11)
                                                                                               gTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGc                                                           <  6:781048/150‑1 (MQ=255)
                                                                                                tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACCGGTCTCCGGCGTTGCCGGGAGGTTTACTTTCTGGTGCCTTTGGGCg                                                         >  5:1519387/1‑151 (MQ=11)
                                                                                                 cGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGTAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCg                                                         <  5:957241/150‑1 (MQ=255)
                                                                                                   aaGCTTCTCATCCTTCCCGGCATGGGCAGAATATTTTATTGCGGATTCGTTTGTTAGTTGAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTc                                                      <  3:1056608/151‑1 (MQ=21)
                                                                                                   aaGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGTTGGTAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCt                                                                <  3:931063/141‑1 (MQ=255)
                                                                                                   aaGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTCATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTc                                                      <  2:1020510/151‑1 (MQ=255)
                                                                                                    aGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGCAGTTCCGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaa                                                                                                <  6:1010595/108‑1 (MQ=255)
                                                                                                    aGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACCCTTCGAAGTGGATGACGGCAGCTTTACAGTCTGCTGCCTTTGGCCGCTCg                                                     >  5:1182957/1‑151 (MQ=255)
                                                                                                    aGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCg                                                     >  1:1232594/1‑151 (MQ=255)
                                                                                                    aGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTCGGAAGTTCAGGGACTTTTGAAAGAGATGGTGGTGGGGGAAGGATTCTACCGTTCGAAGTGGATGACTGCAGATTAACAGTCTTCTGACTTTGTCAGCt                                                       >  6:1300546/1‑149 (MQ=17)
                                                                                                      cTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACCCTGCGAAGTCGATGGCGGGTGCTTTACAGTCTGGTCGCTTTGGCCGCTCggt                                                   >  5:734522/1‑150 (MQ=14)
                                                                                                        tctcATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCa                                                                                                                                                <  8:200964/56‑1 (MQ=255)
                                                                                                           cATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACGTATCGAAGTGGATGGCGGCCGTGTTACCTTCTGAGCCGTTTGGGCGCGGGGGAAccc                                              >  7:73597/1‑151 (MQ=17)
                                                                                                           cATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGACGGGTCGAAGTGGCTGACGGGAGCTTTACTGTCTTCTGCCTTTGGCCGCTCGGGAAccc                                              >  5:398150/1‑151 (MQ=18)
                                                                                                            aTCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTAACATTCGAAGTAGATCACGGCACATTTACAGTCTGCTCGCTTAGGACGCACGGGAAcccc                                             >  3:469412/1‑151 (MQ=21)
                                                                                                             accgtCCCCGCCTCGGCAGAAAAGTTCATTCGGGATTCGATTGCAAGGGCCTGCACTTATGAAATTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCcca                                            <  6:582018/147‑1 (MQ=14)
                                                                                                                ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACACAGAGCGAAGGCGATGACGCCAGCTTTACATTCTGCTCGCTTTGGCCTCTCGGGAACCccagcc                                         >  7:1530049/1‑148 (MQ=11)
                                                                                                                 tCCCCGCATGGGCAGAATATTTCATTGCGGATTCGTTGGTTAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacca                                         <  1:57522/150‑1 (MQ=255)
                                                                                                                  cgagctaTGGGCAGAATATTTAATTGCGGATTCGTTTGTCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAg                                       <  1:71957/144‑1 (MQ=255)
                                                                                                                   cccGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAggg                                     <  5:126420/151‑1 (MQ=255)
                                                                                                                     cGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGt                                   <  1:284120/151‑1 (MQ=255)
                                                                                                                      gCATGGGCAGAATATTTTATTGCGGATTCGTTTGTAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTa                                  <  1:590714/151‑1 (MQ=255)
                                                                                                                      gCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTTAAAGTGATGGTGGTGGGGGAAGGATTACAAACTTCTCAGTCCTTCGCGGGACTTTTACATTCTGCGGCCGATGGACTCTCGGGAGCCCCACCAGCGGt                                   >  8:592588/1‑150 (MQ=2)
                                                                                                                       cATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTaa                                 <  6:956907/151‑1 (MQ=255)
                                                                                                                        aTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAAAGTTCGCAGGCCATCCCGCGAGCGTTACAGTCGGCACCCATAGCGCGCTCGGGAACCCCACCAGGGGAAAt                                >  7:1040505/1‑151 (MQ=2)
                                                                                                                           gtcAGAATATTTTATTGCGGATTCGCTTGTCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTc                              <  1:882049/148‑1 (MQ=18)
                                                                                                                           ggCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACGATCGGAGGCGATGCCGCGTCCTTTACTGTCGTCTCGCTTGGCGCTCTCGGGACCCCCCCCCGCGGTACTTcg                             >  7:1294034/1‑150 (MQ=2)
                                                                                                                             cAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCaa                            >  8:1455856/1‑150 (MQ=255)
                                                                                                                              aGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGTCCGTTCGAAGTCGTTGACGGGTGGTTTCCTTTCTGCCCGCTATGCCCGCTCGGGAACCCCACCAGGGGTACTTCGAAt                          >  8:1124074/1‑151 (MQ=9)
                                                                                                                              aGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACCATCGAAGACCATCACGGAAGATTTACATTCTGCTCGCTAAGGCCTCTCGGGAACCCCACCAGCGCTAATTGAAAt                          >  3:1227556/1‑151 (MQ=14)
                                                                                                                              aGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAAGATTCTAAGTGGCTGACGGGAGCTTTAGATTCTGCTCGCTTTGGGCTCTCGGTAACCCCACCAGCGGAAATTCAAAt                          >  5:1019742/1‑151 (MQ=21)
                                                                                                                              aGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAt                          >  4:263967/1‑151 (MQ=255)
                                                                                                                               gAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAtt                         >  8:1135080/1‑151 (MQ=255)
                                                                                                                                  tatTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATACGATTCGAAGTCGATGACGGCAGATTTAGATTCTGCTCGCTATGTTCTCTCGGGATCCCAACCATGGGTACTTAATATATTg                      >  7:325983/1‑151 (MQ=18)
                                                                                                                                     ttAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGATAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTc                                                                                             <  1:898804/78‑1 (MQ=255)
                                                                                                                                     ttAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTc                                                                                             >  8:901733/1‑78 (MQ=255)
                                                                                                                                     ttAATTGCGGATTCGGTGGGCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAg                    <  5:274724/150‑1 (MQ=255)
                                                                                                                                      tgaTTGCGGATTCGTTGGGCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAgg                   <  8:1476033/148‑1 (MQ=255)
                                                                                                                                      tAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAgg                   <  7:874901/150‑1 (MQ=255)
                                                                                                                                       tcctcctcatacGTTGGCCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGt                  <  6:613009/139‑1 (MQ=18)
                                                                                                                                       aaTTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTa                 <  7:1448270/151‑1 (MQ=255)
                                                                                                                                        aTTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGa                                                  <  7:669201/118‑1 (MQ=255)
                                                                                                                                        aTTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATTACAATCTTAGTGCATCACCCAACATTTAGTTTCTGCTCCCAAAGTACTCTCGGGATCCCAACCAGCGCTAAATCAAATATTGAGGTa                 >  4:341433/1‑150 (MQ=9)
                                                                                                                                               aTTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTga         <  3:101958/151‑1 (MQ=255)
                                                                                                                                                  cGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt      <  1:168335/151‑1 (MQ=255)
                                                                                                                                                   gTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTc                                                      >  8:375401/1‑103 (MQ=255)
                                                                                                                                                   gTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTc                                                      <  1:374419/103‑1 (MQ=255)
                                                                                                                                                   gTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAAtgcttttt                         >  2:143238/1‑125 (MQ=255)
                                                                                                                                                   gTTGGGAAGGTCAGGGACTTTTGAAACTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAAtgcttttt                         <  5:143654/132‑8 (MQ=11)
                                                                                                                                                    ttGGGAAGTTCAGGGACTTTTTAAAGTGATGGTGGTGGGGGAAGGATTCGAAACTTCTAAGACCATGACGGAACATTTACAGTCTTCTGCCTTTGGACTCTCGGGAACCCAACAATGGGTAATTCAAATTTTGATGTAATGCTTCAAAtgt    >  3:873790/1‑150 (MQ=21)
                                                                                                                                                      gggAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtg  <  6:179117/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                       
GGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTG  >  NC_000913/1287067‑1287367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: