| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,880 | 0 | C | A | 28.7% | 157.1 / 32.8 | 146 | A654A (GCC→GCA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (82/20); new base A (40/1); total (123/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.86e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
AGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT > NC_000913/1708732‑1709030 | aGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCACGAAAGCAGGAACAGCACCAGGCTAATGCCGAGCCCTAACACCAGGTCCCACCGCGAACAGCCGCAGtggccgc > 7:274974/1‑145 (MQ=14) cTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCACGCAAGCACGAACAGCAACAGGATAATGCCGAGCCAGAACAACAAGTAGATCCGCCCAAAGCCCCAGTAGCAGCCGc > 1:765831/1‑151 (MQ=14) tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCAAGCAAGCGGGACCAGCACCAGGGTAATGACGAGCACGAAGAACCGCTGGCGCCGCGCAACGCCGCCGTTGACGACGCt > 5:1170067/1‑151 (MQ=2) tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCAAGCAACCAGGAACAGCAACAGGCTAAAAACGAGCCAGAACAACAGGTAAAACAGCGCAAAGCCGCAGTAGaacagaa > 1:615206/1‑145 (MQ=255) acttaggAAGCAGAAAAACAGGCAGATCCGCGCAAAACTGCCGTCGAAGCAGCTATTGCCCGGGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTa < 6:165524/146‑1 (MQ=11) cccAGAAAACCATGCCGATCCCCGGAAAACGGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa < 5:1038215/150‑1 (MQ=11) cAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCAAGAAAACACGAACAGCACCAGGATAATACCGAGCCAGAACAACAGATAGATACGCCCAAATCGGCAGTAGCAGACGCTATTgaacgct > 1:840836/1‑144 (MQ=2) agaagaACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCACGCAAGCGGGAACAGCCACAGGCTAATGCGGCTCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTCCCCgcgcg > 8:852604/1‑150 (MQ=11) aagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCACGAGCCAAAGCCCGCAAGCTGGAACAGCACCCGGCTAATTCCGAGGCAGAACACCAGGTCTATCCGCGCACCGCCGCCGACCCCGCGGCTATTGCCCGCGccc > 6:23257/1‑149 (MQ=14) aacaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATACATAGCAAGAACGTCATGTAGATAAACGCAAAACGGAATACGAAACCTCTATTGCCCGCGCCa > 4:732805/4‑150 (MQ=2) agaaCAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCACGAAAGCTGGCACAGCAACAGGGTAATGCCGAGCCAGAACAACAGGTAGCTCCGCGCAAAGCTGCCGTAGAAGCCGCTATTGCCCGCGCCaa > 6:629960/1‑150 (MQ=14) acccgatgccGATCCGCGCATAAGTGCCGGGGAAGCAGCTATGGCCGGTGCCAATGTACGGAAGCTGGAACACCAACAGGATAATCACGACCCAGAACCCCAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa < 8:1103748/142‑1 (MQ=2) gaaCAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTCGAACAGCACCAGGATAATGCCGAGACAGACGAACAGCTCGATACGCGCAAAGAGGCAGTAGACGCCGCTATTGCCCGCGCaaacg > 7:701912/1‑149 (MQ=11) atagtctacGATCCCCGGAAATCCGCCGTGGTACGAGCTATCTCCCGTGCATAAGCTAGCTATTTGGAACATCTACAGGATACTTCCGACCCAGAACAACTGGGGGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa < 5:1035645/142‑1 (MQ=2) cAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAAAGCACGAAAACAGGACCAGCAACAGGCTAATGACGAGCCAGAAAAACAAGTGGATCCGAGAACATCGGCAGTGGAAGCCGCTATTGCCCGAGCGAACgcc > 2:884821/1‑149 (MQ=9) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTTGACGCGGCTATTGCCCGCGCAAACgcc > 6:829521/1‑147 (MQ=14) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGCTCCGCGCACAGCGGCCGTCGCCGCGGCGATTGCCcgcgcgcacgcgcgcaccg > 5:591425/1‑148 (MQ=11) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTGGCCGCGGCTATTGCCCGCGCGCACGCCCGCaaagcg > 8:5181/1‑148 (MQ=14) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCCCGCGCAAACGCCAGAAAACgggc > 2:259980/1‑150 (MQ=11) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCCAACGCCAGCAAACcggc > 6:341977/1‑150 (MQ=14) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGCAGCCGCTATTGCCCGAGCAAAAgcccaaaaacccgaac > 2:184131/1‑136 (MQ=14) gccgTAGAAGCAGCTATTTCCCGGGACAACTCACGGAAGCTGGAACACCAACAGGATACTGCCGACCCAGAACAACAGGGGGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAcc < 8:759024/149‑1 (MQ=14) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCAACCGGCt > 3:1053930/1‑151 (MQ=255) cgTCGAAGCCGCTATTGCCCGACCCAAAGCACGCAAGCACGAACACCAACAGGCTAATGCCGACCCAGAACAACACCTCGCTCCGCGCAAAGCCGCCCTAGAACCCCCTAATCCCCGACCCAACGCCAACAAACACGAACAGAAAcacgc > 3:532432/1‑146 (MQ=9) ggagaagaagCTATTCCCCGGGCAAAACCACGCAAGCTGGAACAGCAACAGGCTAATCCCGACCCAGAACAACAGGGCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa < 7:1120592/142‑1 (MQ=14) gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGCAAGCCAACAAACCCGCACAGCagcaggat > 4:294488/1‑143 (MQ=11) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGAGCCCACGCCCGCAAACCGGCCCAGCAGCAGGCtcaacc > 5:395888/1‑146 (MQ=14) aGCCGCTATTGCCCGAGCCAAAGCACGCAACCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCAGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACACGAACAGCacaaggataaag > 2:88888/1‑138 (MQ=11) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCCCAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCgg > 6:687855/1‑150 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTGGAAGCCGCTATTGCCCGAGCGAAAGCCCGCAAACGCGCCCAGCAAAAGGCTCAtcacg > 5:1164143/1‑146 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGCGAACAGCAGCAGGCTAATGAgg > 2:1376593/1‑150 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAACGCCCTAAAACCCGAACAGCAACAGGCTAAAGCGGAGcc > 3:718330/1‑150 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGCGCACAAGCGAGCAAACCCGCCCAGCAAAAGGCTCATACCGAGcc > 2:769832/1‑150 (MQ=14) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGCGCCAACGCCCCCAAAGGCGACCAGCACAAGGCTTATGCGGAGGCat > 8:1139821/1‑150 (MQ=14) cccGCGCCAAAGCTCGCAAGCTGGAACATCAACATGCTAATGCCGACCCAGAACAACAGTTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga < 4:75930/151‑1 (MQ=255) ccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGAAGCGGCTATTGCCCGAGCGAACGCGCGCAAAGGCGCCCAGCACCAGGGTCATGCGGAGCCagaag > 8:587029/1‑149 (MQ=14) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCGAAAGCCAGCAAACCCGAACAGCACCAGGCTAATGACGAGCCCGAAAAAc > 3:1100269/1‑151 (MQ=14) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCCCGCAAACGGGCCCAGCACCAGGCTAATGCGGAGCCagaagacc > 5:762328/1‑149 (MQ=14) tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGACAAAATTACACCCGCCAGATCGCGAAAACTGTAACAGAAACAGGATAATGCGGAGCGAGACGAAc > 1:1223500/1‑149 (MQ=11) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCCCAAAGGCGCACAGCACCCGCATATAGCGGAGCACgaagaagaagt > 8:277473/1‑146 (MQ=14) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCAAAAGCCAACAAACCCGACCAGCAACAGGATAAAAACGAGCAAGAAAAACAgtg > 1:100356/1‑149 (MQ=2) cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACCGGAACAGCAACAGGCTAATCCCGAGCAAGAACAACACGtt > 6:896526/1‑151 (MQ=14) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCCGCGGCTATTGCCCGCGCCCAAGCCCGCAAAGCCGAACAGCACCAGGCTAATGCGGAGCCAGAACACCTGGttcc > 8:397323/1‑149 (MQ=14) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCAAAAACGCGACCAGCAACAGGCTAAACCGGAGCCAGAAAAACAgat > 4:1135050/1‑146 (MQ=14) cGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCACAAAACAACACCGTCGAAGACGCTAATCCACTAGCCAAAGCTCTAAAACTCGAACAGCAACCGGATAATTAAAAAAAAGAAGAAGAGGGTGATCcgg > 1:161527/1‑150 (MQ=9) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCaac > 8:1290227/1‑150 (MQ=255) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAAAGCGAGCAAACGCGAACAGCAGCAGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGCaa > 1:1290633/1‑149 (MQ=14) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAAACGGGACCAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGAtaggcggaa > 3:1037306/1‑141 (MQ=17) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAATAAGAGGTTGATACGCGCAAACCTGc > 5:295982/1‑151 (MQ=14) aGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAg < 5:1398781/98‑1 (MQ=255) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCACAGCGGCCGTCg > 5:859621/1‑151 (MQ=255) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAACGCGAACAGCAACAGGCTAATCCGGAGCCAGAACAACACGTACAACCACGAAAAGCtccagaac > 1:232463/1‑144 (MQ=14) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCGCACCCAGCAGACCCGTGTGCTCCGCGCAAAGCTGCGGTCg > 4:706517/1‑151 (MQ=14) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGAGAAAACGGGAACAGCTACCGGCTAATGCGGAGACAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGttgc > 7:741625/1‑148 (MQ=17) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAAAGCGAGAAAACGCGAACAGCAACAGGCTAAAGCGGAACCAGAACAACAGGTTGATCCGCGCAAACCTgaagtagc > 3:1549820/1‑144 (MQ=11) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAACCGCCACAGCAACCAGCTAATGCGTAGCCAGAAGAACAGGGTGCTCCGCGCAAAGCTGCAGTCg > 8:1290442/1‑150 (MQ=17) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCACCAGGCTAAAGCGGAGCCAGAAGACCACGTTGATCCCCGCAAAGCTGCAGACGa > 6:1126723/1‑150 (MQ=14) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCAGTCGac > 4:412844/1‑150 (MQ=255) cAGGCTAATGCCGAGCCAGAACAAAAGGTAGATCAGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAGCAAAATTGAAAATAAACAGGCTATAGCCGATGAAGAAGAAAAGGTTCATCATCGAAAATCTGcagaagaat > 4:833230/1‑143 (MQ=255) aggctacttaggAGTCAGAACACCTTGTGGATCCTCGTAAAGCTGCCGTAGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGATAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc < 4:1215960/140‑1 (MQ=17) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTAGATCAGCGCAAAGCtccagtagccgc > 4:286523/1‑140 (MQ=14) cgctcctgacGAGCCAGCAGAACAGCGCGCTCCGCTCCAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCg < 5:447805/142‑1 (MQ=14) gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAACGCCCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGGTAGATCAGCGCAAAGCTGCAGtggccgcgg > 7:1569739/1‑143 (MQ=14) cattagcgccgCCAGACCACCCGGGCGCTCCGCCCATCGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGc < 5:947690/141‑1 (MQ=14) cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGc > 5:270013/1‑151 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGAGAAAACGCGAACAGCAGCAGGATAAAGCGGAGCAAGAATAACATGTAGATACGCCAAAAGCAGCCTTTGAAGCgca > 3:595399/1‑148 (MQ=9) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGCTAGATCCGCGCAAAGCTGCCGTAGAAGCGGCt > 4:616839/1‑151 (MQ=255) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGGTTGATCAGCGCAACGCTGCAGTGGCCGCGGCt > 1:1054396/1‑150 (MQ=14) gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATAGGCGAACAGCTGCCGTCGCAGCTGCTAtgg > 6:127374/1‑149 (MQ=14) ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGCGAACAGCAAAAGGATAATGAGGAGAAACAAGAACAGGATGATAAGCGCAAAGCTGCAGTAGAAGCTGCTATTGc > 2:689654/1‑151 (MQ=9) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACGGCAACAGGCTAATGCGGATCCAGAAGACGAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCAcc > 8:902852/1‑150 (MQ=14) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGCTCGGCAGCGGTCGCGGCGGCtctggcgcgagc > 7:560547/1‑140 (MQ=14) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCACgcgc > 7:420292/1‑151 (MQ=255) agaagaACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCCCGAAACCACGAACAGCAACAAGATAATCAGGACCCAGAAGAACAGGTGGATCAGCGCAAAGCGGAAGTAGACGCGGCTAttcccagcgc > 3:330939/1‑142 (MQ=2) aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCACGCGcc > 8:304803/1‑151 (MQ=255) accacaGGCCGATCCCCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAACAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa < 7:367644/148‑1 (MQ=255) acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGCCAGCGGCTATTGCACgcgcaa > 3:979543/1‑147 (MQ=17) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGACGCGGCTATTGCCCGCGCaaacg > 6:1450616/1‑149 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCAGTTGCAGCGGCTATTGCCCGCGCCAACGc > 6:1353341/1‑151 (MQ=14) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGAAAAGCTGCCGTAGCAGCGGCGATTGCCCGCGCCAAGGcc > 2:109523/1‑150 (MQ=14) caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAGGccc > 6:97179/1‑149 (MQ=255) gcgacccccccAAACCCCCCGGCGAAGCCGCTATTGCCCTAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCGACAAGAAGAGCTGTAGCCGCGAAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa < 8:1523343/141‑1 (MQ=14) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCAACGCACCCaac > 1:538731/1‑150 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAACGCACGCAAGc > 7:1470535/1‑151 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGAAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCgcgcgcaggcgcgcgggc > 1:140071/1‑137 (MQ=17) atcgccgcACATCCGCTCTCGAAGCAGCTATCGCCCGAGCCAAATCTCGCAACCGGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 2:1520504/146‑1 (MQ=14) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCCACGCaagcaagcg > 6:348665/1‑150 (MQ=17) tCCGCGCAACCCCGCCGGCGAAGCCGCTATTGCCAGTCCGCACGCGCGCAAACCGGTAGCCGATCCGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 8:887309/150‑1 (MQ=14) cccgcccaGCCGCCGTCGAAGCCGCTATGGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACACGGTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGa < 6:756197/144‑1 (MQ=14) gtatatctgccgTCGAAGCCGCTATTGCCCGAGGCTAAGGCGGGAATCGCGAACAGCATCCTGCTAATGCGCACTCAGAACAAGAGGGTGATCCCCGGAAACCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa < 8:454517/143‑1 (MQ=9) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACATCAACAGCAACACGATAATGCGGAGCCAGAAGAAAATGTTGATCCGCGCAAAGCAGCCGTCGAAGAGGATATTGAACGAGCCAAAGCCCGCAAggagcggcagc > 1:1518462/1‑141 (MQ=14) aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAGCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCGATTGCACGCGCCAAAGCCAGCAACCTGGAACAGct > 8:874284/1‑149 (MQ=17) ccgccgTCGACGACGCTATTCCCCCAGCCAAAGCACGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATACGCGCAAAGCTCCAGTAGAAACGGCTATTGCACGCGCAAAAGCAATAAACCTCGAACAGAAAc > 1:417779/1‑150 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc > 2:1243191/1‑150 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACCCAAGCTGGAACAGCacc > 6:677722/1‑148 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg > 7:1380293/1‑151 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCACGACCAGCAACAgg > 3:144605/1‑151 (MQ=17) ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAACGCACGCAAGCTCGCCCAGCACCAGGc > 5:1322404/1‑151 (MQ=17) cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGATCAGCAACAGGCt > 6:24932/1‑151 (MQ=255) cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCACGAACAGCAACAGGCt > 3:79717/1‑151 (MQ=255) | AGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT > NC_000913/1708732‑1709030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |