| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,883 | 0 | C | A | 28.0% | 192.0 / 24.9 | 167 | V655V (GTC→GTA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (86/22); new base A (39/3); total (139/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.45e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
CTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT > NC_000913/1708741‑1709033 | cTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCACGCAAGCACGAACAGCAACAGGATAATGCCGAGCCAGAACAACAAGTAGATCCGCCCAAAGCCCCAGTAGCAGCCGc > 1:765831/1‑151 (MQ=14) tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCAAGCAACCAGGAACAGCAACAGGCTAAAAACGAGCCAGAACAACAGGTAAAACAGCGCAAAGCCGCAGTAGaacagaa > 1:615206/1‑145 (MQ=255) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAACCAGGACCAGCAACAGGATAATGCGCGGCCAGAACCACAGCTGGATACGCGCAAAGACGCCGTAGCCGCCGCTAGTGCCCg > 5:489369/1‑151 (MQ=11) cccAGAAAACCATGCCGATCCCCGGAAAACGGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa < 5:1038215/150‑1 (MQ=11) agaagaACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCACGCAAGCGGGAACAGCCACAGGCTAATGCGGCTCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTCCCCgcgcg > 8:852604/1‑150 (MQ=11) aagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAACGCCCGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCACCGCCGCCGTCGACGCGGCTATTGCCCGCGCCac > 6:23256/1‑150 (MQ=14) agaaCAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCACGAAAGCTGGCACAGCAACAGGGTAATGCCGAGCCAGAACAACAGGTAGCTCCGCGCAAAGCTGCCGTAGAAGCCGCTATTGCCCGCGCCaa > 6:629960/1‑150 (MQ=14) gaaCAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTCGAACAGCACCAGGATAATGCCGAGACAGACGAACAGCTCGATACGCGCAAAGAGGCAGTAGACGCCGCTATTGCCCGCGCaaacg > 7:701912/1‑149 (MQ=11) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTTGACGCGGCTATTGCCCGCGCAAACgcc > 6:829521/1‑147 (MQ=14) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGCGcccacgcccgaaac > 5:864502/1‑139 (MQ=11) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGCTCCGCGCACAGCGGCCGTCGCCGCGGCGATTGCCcgcgcgcacgcgcgcaccg > 5:591425/1‑148 (MQ=11) gATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTTGCCGCGGCTATTGCCCGCGCAAACgccaaaaagc > 1:1445368/1‑143 (MQ=11) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTGGCCGCGGCTATTGCCCGCGCGCACGCCCGCaaagcg > 8:5181/1‑148 (MQ=14) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCCCGCGCAAACGCCAGAAAACgggc > 2:259980/1‑150 (MQ=11) cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGAAACAGGCTAATGCCGAACCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCACGAGCACAAgccaaaaaacacgaac > 4:1438659/1‑137 (MQ=11) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGCAGCCGCTATTGCCCGAGCAAAAgcccaaaaacccgaac > 2:184131/1‑136 (MQ=14) gccgTAGAAGCAGCTATTTCCCGGGACAACTCACGGAAGCTGGAACACCAACAGGATACTGCCGACCCAGAACAACAGGGGGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAcc < 8:759024/149‑1 (MQ=14) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCAACCGGCt > 3:1053930/1‑151 (MQ=255) gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGCAAGCCAACAAACCCGCACAGCagcaggat > 4:294488/1‑143 (MQ=11) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGAGCGAACGCCCCCAAACGCGAACAGCACCAGGCtc > 8:1058012/1‑149 (MQ=14) cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTGGAAGCGGCTATTGCCCGCGCGCACGCCCCCAAACCGGCACAGCACCAGGGTaa > 6:1171573/1‑150 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGAGCCCACGCCCGCAAACCGGCCCAGCAGCAGGCtcaacc > 5:395888/1‑146 (MQ=14) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGAAGCGGCTATTGCCCGCGCGAACGCGCGCAAACGCGAACAGCACCAGGCtctagcc > 7:1369805/1‑145 (MQ=14) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGAAGCGGCTATTGCCCGCGCGCACGCGAGCAAAGCGGAACAGCagcagggtcttgcg > 8:551152/1‑138 (MQ=14) aGCCGCTATTGCCCGAGCCAAAGCACGCAACCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCAGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACACGAACAGCacaaggataaag > 2:88888/1‑138 (MQ=11) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCCCAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCgg > 6:687855/1‑150 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTGGAAGCCGCTATTGCCCGAGCGAAAGCCCGCAAACGCGCCCAGCAAAAGGCTCAtcacg > 5:1164143/1‑146 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGCGAACAGCAGCAGGCTAATGAgg > 2:1376593/1‑150 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAACGCCCTAAAACCCGAACAGCAACAGGCTAAAGCGGAGcc > 3:718330/1‑150 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGCGCACAAGCGAGCAAACCCGCCCAGCAAAAGGCTCATACCGAGcc > 2:769832/1‑150 (MQ=14) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGCGCCAACGCCCCCAAAGGCGACCAGCACAAGGCTTATGCGGAGGCat > 8:1139821/1‑150 (MQ=14) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACGGGCACAGCACCCGGCTCATGCGGAGcc > 7:371834/1‑149 (MQ=255) cccGCGCCAAAGCTCGCAAGCTGGAACATCAACATGCTAATGCCGACCCAGAACAACAGTTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga < 4:75930/151‑1 (MQ=255) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCGAAAGCCAGCAAACCCGAACAGCACCAGGCTAATGACGAGCCCGAAAAAc > 3:1100269/1‑151 (MQ=14) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCCCGCAAACGGGCCCAGCACCAGGCTAATGCGGAGCCagaagacc > 5:762328/1‑149 (MQ=14) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGAAAACCCGAACAGCACAAGGCTAATCCCGAGCCagaac > 3:1290216/1‑147 (MQ=11) gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCCAGAAGAGCACGTAGCTCCGCGCCACGCAGCGGGCGACGCGGCTCGTGCGCGCGGCACAGCGCGCAAGCGGGAACAGAAACAGGCTCCTGCgggggcggccgcgcg > 6:1351188/1‑138 (MQ=2) tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGACAAAATTACACCCGCCAGATCGCGAAAACTGTAACAGAAACAGGATAATGCGGAGCGAGACGAAc > 1:1223500/1‑149 (MQ=11) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCCCAAAGGCGCACAGCACCCGCATATAGCGGAGCACgaagaagaagt > 8:277473/1‑146 (MQ=14) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCAAAAGCCAACAAACCCGACCAGCAACAGGATAAAAACGAGCAAGAAAAACAgtg > 1:100356/1‑149 (MQ=2) cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACCGGAACAGCAACAGGCTAATCCCGAGCAAGAACAACACGtt > 6:896526/1‑151 (MQ=14) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCAAAAACGCGACCAGCAACAGGCTAAACCGGAGCCAGAAAAACAgat > 4:1135050/1‑146 (MQ=14) cGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCACAAAACAACACCGTCGAAGACGCTAATCCACTAGCCAAAGCTCTAAAACTCGAACAGCAACCGGATAATTAAAAAAAAGAAGAAGAGGGTGATCcgg > 1:161527/1‑150 (MQ=9) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTGGAAGCCGCTATTGCCCGCGCTAAAGCCAGAAAACCGGACCAGCAGAAGGCTGATGCGGAGGCCGAAGAACACGtgcctaaccg > 5:1480670/1‑142 (MQ=2) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCaac > 8:1290227/1‑150 (MQ=255) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGAAAGCCAGCAAACGCGAACAGCAGAAGGATGATGACGAGCCATAAGACCAAGtaaatcatccaaac > 3:551288/1‑138 (MQ=2) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTGCCCGAGCAAAAGCCAGCAAACCGGAACAGCAACAGGCTAAAGACGAGCAAGAAGATCAGGttcgtcggcgtag > 2:954771/1‑138 (MQ=14) gAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGCGAACAGCACCAGGATAATGCGGAGCCAGAAGAACACGATCAGCCGCGCAAAGCTg > 1:220581/1‑151 (MQ=14) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAATAAGAGGTTGATACGCGCAAACCTGc > 5:295982/1‑151 (MQ=14) aGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAg < 5:1398781/98‑1 (MQ=255) gCAACACGCTAATGCCGATTAAGAACTACAGGTTTATCCTCGAATAGGCTCTTTCGATGTAGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 4:73420/151‑1 (MQ=18) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTCCCCGCGCCACAGCGCGCAACCGGGGACAGCAAGCGGCTAATGCGGTGCCAGAAGAACAGGTTGATACGCGCAAAGCTGCCGtgg > 6:1486868/1‑149 (MQ=14) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAAAGCGAGAAAACGCGAACAGCAACAGGCTAAAGCGGAACCAGAACAACAGGTTGATCCGCGCAAACCTgaagtagc > 3:1549820/1‑144 (MQ=11) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAACCGCCACAGCAACCAGCTAATGCGTAGCCAGAAGAACAGGGTGCTCCGCGCAAAGCTGCAGTCg > 8:1290442/1‑150 (MQ=17) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCAGTCGac > 4:412844/1‑150 (MQ=255) aggctacttaggAGTCAGAACACCTTGTGGATCCTCGTAAAGCTGCCGTAGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGATAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc < 4:1215960/140‑1 (MQ=17) aGGTTAATAACGAGGGAGAACAAGAGGTTGATCCTCGAAAATCTGCAGTTGATGAAGCTATTTCACGTGACAAAGGTCGGAAACTGGAACATCATCAGGCTAATGCGGAGCCAGAATAAGTGGTTGATCCTCGCAAAGCTGCCGTCGAAGc < 4:71215/151‑1 (MQ=255) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGAAAACCCGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGCTCCACCCAAAGCGGcagaagcacc > 4:998437/1‑142 (MQ=14) cattagcgccgCCAGACCACCCGGGCGCTCCGCCCATCGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGc < 5:947690/141‑1 (MQ=14) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGAGAAAACGCGAACAGCAGCAGGATAAAGCGGAGCAAGAATAACATGTAGATACGCCAAAAGCAGCCTTTGAAGCgca > 3:595399/1‑148 (MQ=9) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGCTAGATCCGCGCAAAGCTGCCGTAGAAGCGGCt > 4:616839/1‑151 (MQ=255) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCAGTCGCCGCGGCt > 8:370745/1‑150 (MQ=17) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGGTTGATCAGCGCAACGCTGCAGTGGCCGCGGCt > 1:1054396/1‑150 (MQ=14) tGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTAGAACAGAACACCGAAAATGAGGCAAAAGAAGAAGAGGATAATCAGCGAAAAGCTGcactcccagacaataa > 1:884392/1‑135 (MQ=0) ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGCGAACAGCAAAAGGATAATGAGGAGAAACAAGAACAGGATGATAAGCGCAAAGCTGCAGTAGAAGCTGCTATTGc > 2:689654/1‑151 (MQ=9) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACGGCAACAGGCTAATGCGGATCCAGAAGACGAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCAcc > 8:902852/1‑150 (MQ=14) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACgcgc > 1:527995/1‑151 (MQ=255) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCACgcgc > 7:420292/1‑151 (MQ=255) agaagaACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCCCGAAACCACGAACAGCAACAAGATAATCAGGACCCAGAAGAACAGGTGGATCAGCGCAAAGCGGAAGTAGACGCGGCTAttcccagcgc > 3:330939/1‑142 (MQ=2) gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGcc > 6:642021/1‑150 (MQ=255) aagaacaGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCAAGCAACCGGGAACAGCAACAAGCTAATTCGGGCCCCGAAGAACAGGTAGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACtcgcta > 1:1341761/4‑148 (MQ=2) aacaacAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCTTAGAAGCGGCTATTGCACGCGCCa > 6:306399/1‑150 (MQ=255) aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCAGCGGCTATTGCACGCGCCa > 7:710004/1‑150 (MQ=255) acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGCCAGCGGCTATTGCACgcgcaa > 3:979543/1‑147 (MQ=17) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGACGCGGCTATTGCCCGCGCaaacg > 6:1450616/1‑149 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCAAgcgctcacgc > 3:839780/1‑145 (MQ=14) caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAGGccc > 6:97179/1‑149 (MQ=255) gcgacccccccAAACCCCCCGGCGAAGCCGCTATTGCCCTAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCGACAAGAAGAGCTGTAGCCGCGAAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa < 8:1523343/141‑1 (MQ=14) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCAACGCACCCaac > 1:538731/1‑150 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAACGCACGCAAGc > 7:1470535/1‑151 (MQ=255) atcgccgcACATCCGCTCTCGAAGCAGCTATCGCCCGAGCCAAATCTCGCAACCGGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 2:1520504/146‑1 (MQ=14) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCCACGCaagcaagcg > 6:348665/1‑150 (MQ=17) tCCGCGCAACCCCGCCGGCGAAGCCGCTATTGCCAGTCCGCACGCGCGCAAACCGGTAGCCGATCCGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 8:887309/150‑1 (MQ=14) cccgcccaGCCGCCGTCGAAGCCGCTATGGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACACGGTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGa < 6:756197/144‑1 (MQ=14) ccgccaccccgccgGCGCAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGaa < 7:220417/143‑1 (MQ=17) cgcaccccccctccGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAATCTGGAACACCAACAGGCTAATGCGGATGCAGAAGAACAGGTGTTTCCGCGCATATCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa < 7:494855/138‑1 (MQ=11) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGACCAGc > 8:866638/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACATCAACAGCAACACGATAATGCGGAGCCAGAAGAAAATGTTGATCCGCGCAAAGCAGCCGTCGAAGAGGATATTGAACGAGCCAAAGCCCGCAAggagcggcagc > 1:1518462/1‑141 (MQ=14) cgccgccGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGAGGCTATTGCCCGCGCCAACGCCCGCAACCGGGCCCAGCa > 8:399405/2‑150 (MQ=14) ctgccgTTGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATg < 1:77795/61‑1 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGCACAGCAAc > 5:1164747/1‑150 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc > 2:1243191/1‑150 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg > 7:1380293/1‑151 (MQ=255) ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAACGCACGCAAGCTCGCCCAGCACCAGGc > 5:1322404/1‑151 (MQ=17) cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGATCAGCAACAGGCt > 6:24932/1‑151 (MQ=255) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCCAAGCACGCAAGCTGGAACAGCAACAGGCTat > 1:356320/1‑150 (MQ=255) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGACCAGCAGCAGGCtc > 2:322782/1‑149 (MQ=21) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAGCAGGCTa > 4:443781/1‑150 (MQ=255) cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCa < 1:1322772/45‑1 (MQ=255) cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCACCAGGCTAAt > 8:287914/1‑151 (MQ=255) | CTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT > NC_000913/1708741‑1709033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |