| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,910 | 0 | G | C | 23.5% | 316.4 / 21.4 | 185 | A664A (GCG→GCC) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base G (102/28); new base C (39/1); total (149/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.38e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 191 total aligned reads displayed.
GATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCG > NC_000913/1708767‑1709060 | gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGCTCCGCGCACAGCGGCCGTCGCCGCGGCGATTGCCcgcgcgcacgcgcgcaccg > 5:591425/1‑148 (MQ=11) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTGGCCGCGGCTATTGCCCGCGCGCACGCCCGCaaagcg > 8:5181/1‑148 (MQ=14) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCCCGCGCAAACGCCAGAAAACgggc > 2:259980/1‑150 (MQ=11) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCCAACGCCAGCAAACcggc > 6:341977/1‑150 (MQ=14) gccgTAGAAGCAGCTATTTCCCGGGACAACTCACGGAAGCTGGAACACCAACAGGATACTGCCGACCCAGAACAACAGGGGGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAcc < 8:759024/149‑1 (MQ=14) cgTCGAAGCCGCTATTGCCCGACCCAAAGCACGCAAGCACGAACACCAACAGGCTAATGCCGACCCAGAACAACACCTCGCTCCGCGCAAAGCCGCCCTAGAACCCCCTAATCCCCGACCCAACGCCAACAAACACGAACAGAAAcacgc > 3:532432/1‑146 (MQ=9) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGAGCGAACGCCCCCAAACGCGAACAGCACCAGGCtc > 8:1058012/1‑149 (MQ=14) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCCACGCGCGCAAAGCGGCCCAGCCAGCGGCtgagg > 5:742411/1‑147 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGAGCCCACGCCCGCAAACCGGCCCAGCAGCAGGCtcaacc > 5:395888/1‑146 (MQ=14) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGAAGCGGCTATTGCCCGCGCGAACGCGCGCAAACGCGAACAGCACCAGGCtctagcc > 7:1369805/1‑145 (MQ=14) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGAAGCGGCTATTGCCCGCGCGCACGCGAGCAAAGCGGAACAGCagcagggtcttgcg > 8:551152/1‑138 (MQ=14) aGCCGCTATTGCCCGAGCCAAAGCACGCAACCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCAGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACACGAACAGCacaaggataaag > 2:88888/1‑138 (MQ=11) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCCCAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCgg > 6:687855/1‑150 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTGGAAGCCGCTATTGCCCGAGCGAAAGCCCGCAAACGCGCCCAGCAAAAGGCTCAtcacg > 5:1164143/1‑146 (MQ=14) tATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAAGATAGGAAGAGCTCGATCCTCGCCAAGCGGCCGTACACCCCCGGAGTGCACGCGCCAAAGCCCGCAAGCTCGAACAGCGCCCggggcaggcggggggg > 6:759043/1‑137 (MQ=2) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAACGCCCTAAAACCCGAACAGCAACAGGCTAAAGCGGAGcc > 3:718330/1‑150 (MQ=14) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACGGGCACAGCACCCGGCTCATGCGGAGcc > 7:371834/1‑149 (MQ=255) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGAAAACCCGAACAGCACAAGGCTAATCCCGAGCCagaac > 3:1290216/1‑147 (MQ=11) tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGACAAAATTACACCCGCCAGATCGCGAAAACTGTAACAGAAACAGGATAATGCGGAGCGAGACGAAc > 1:1223500/1‑149 (MQ=11) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCCCAAAGGCGCACAGCACCCGCATATAGCGGAGCACgaagaagaagt > 8:277473/1‑146 (MQ=14) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCAAAAGCCAACAAACCCGACCAGCAACAGGATAAAAACGAGCAAGAAAAACAgtg > 1:100356/1‑149 (MQ=2) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCCGCGGCTATTGCCCGCGCCCAAGCCCGCAAAGCCGAACAGCACCAGGCTAATGCGGAGCCAGAACACCTGGttcc > 8:397323/1‑149 (MQ=14) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTGGAAGCCGCTATTGCCCGCGCTAAAGCCAGAAAACCGGACCAGCAGAAGGCTGATGCGGAGGCCGAAGAACACGtgcctaaccg > 5:1480670/1‑142 (MQ=2) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAAAGCGAGCAAACGCGAACAGCAGCAGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGCaa > 1:1290633/1‑149 (MQ=14) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAAACGGGACCAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGAtaggcggaa > 3:1037306/1‑141 (MQ=17) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAATAAGAGGTTGATACGCGCAAACCTGc > 5:295982/1‑151 (MQ=14) gCAACACGCTAATGCCGATTAAGAACTACAGGTTTATCCTCGAATAGGCTCTTTCGATGTAGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 4:73420/151‑1 (MQ=18) gcaCATGCTAATGGCGAGCCACAAATCGATGGCGATCCCCGAAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 7:1425417/148‑1 (MQ=17) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCACAGCGGCCGTCg > 5:859621/1‑151 (MQ=255) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAACGCGAACAGCAACAGGCTAATCCGGAGCCAGAACAACACGTACAACCACGAAAAGCtccagaac > 1:232463/1‑144 (MQ=14) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCGCACCCAGCAGACCCGTGTGCTCCGCGCAAAGCTGCGGTCg > 4:706517/1‑151 (MQ=14) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTCCCCGCGCCACAGCGCGCAACCGGGGACAGCAAGCGGCTAATGCGGTGCCAGAAGAACAGGTTGATACGCGCAAAGCTGCCGtgg > 6:1486868/1‑149 (MQ=14) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAACCGCCACAGCAACCAGCTAATGCGTAGCCAGAAGAACAGGGTGCTCCGCGCAAAGCTGCAGTCg > 8:1290442/1‑150 (MQ=17) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCAAATGAACCAGCCAAAGCACGCAAACAGGAAAAGCAAAAGTCTAATGCGGAGCCAGAAGAACAGGTTGATAAGAGAAAAGCTGCAGtggc > 1:552758/1‑148 (MQ=14) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCACCAGGCTAAAGCGGAGCCAGAAGACCACGTTGATCCCCGCAAAGCTGCAGACGa > 6:1126723/1‑150 (MQ=14) cAGGCTAATGCCGAGCCAGAACAAAAGGTAGATCAGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAGCAAAATTGAAAATAAACAGGCTATAGCCGATGAAGAAGAAAAGGTTCATCATCGAAAATCTGcagaagaat > 4:833230/1‑143 (MQ=255) aaGGCTAATCCCCAGCCAGAACAACAGCGCCATACGCCCATCCCCGCCGTCGTCGCCGCTACGGCCCTAGCCAAAGCTCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAg < 8:1227283/150‑1 (MQ=14) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTAGATCAGCGCAAAGCtccagtagccgc > 4:286523/1‑140 (MQ=14) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGAAAACCCGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGCTCCACCCAAAGCGGcagaagcacc > 4:998437/1‑142 (MQ=14) gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAACGCCCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGGTAGATCAGCGCAAAGCTGCAGtggccgcgg > 7:1569739/1‑143 (MQ=14) gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGAAAAGCTGCCGTCGACGCgg > 3:1073418/1‑151 (MQ=14) cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGc > 5:270013/1‑151 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGAGAAAACGCGAACAGCAGCAGGATAAAGCGGAGCAAGAATAACATGTAGATACGCCAAAAGCAGCCTTTGAAGCgca > 3:595399/1‑148 (MQ=9) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGCTAGATCCGCGCAAAGCTGCCGTAGAAGCGGCt > 4:616839/1‑151 (MQ=255) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGAGGAGCCAGAAGAACAGGTTGATCAGCGCAACGCTGCAGTGGCCGCGGCt > 1:1054396/1‑150 (MQ=14) gCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATAGGCGAACAGCTGCCGTCGCAGCTGCTAtgg > 6:127374/1‑149 (MQ=14) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACGGCAACAGGCTAATGCGGATCCAGAAGACGAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCAcc > 8:902852/1‑150 (MQ=14) cAGAAGAACAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGACCGAGGCAAAGCGAGCAAGCTGGAACAGGAACCGGGTAATGAGGACGCAGAAGAACAGGTATATCATAGCAAAGCGGCAGTGGCGGCGGCTaggggcggcgg > 3:626062/1‑141 (MQ=2) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACgcgc > 1:527995/1‑151 (MQ=255) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCACgcgc > 7:420292/1‑151 (MQ=255) aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCACGCGcc > 8:304803/1‑151 (MQ=255) gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGcc > 6:642021/1‑150 (MQ=255) acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGCCAGCGGCTATTGCACgcgcaa > 3:979543/1‑147 (MQ=17) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCAGTTGCAGCGGCTATTGCCCGCGCCAACGc > 6:1353341/1‑151 (MQ=14) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTAGATCCGCGAAAAGCTGCCGTAGCAGCGGCGATTGCCCGCGCCAAGGcc > 2:109523/1‑150 (MQ=14) gcgacccccccAAACCCCCCGGCGAAGCCGCTATTGCCCTAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCGACAAGAAGAGCTGTAGCCGCGAAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa < 8:1523343/141‑1 (MQ=14) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc < 6:954019/77‑1 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGAAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCgcgcgcaggcgcgcgggc > 1:140071/1‑137 (MQ=17) atcgccgcACATCCGCTCTCGAAGCAGCTATCGCCCGAGCCAAATCTCGCAACCGGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 2:1520504/146‑1 (MQ=14) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCACGCAAGcg > 6:40462/1‑150 (MQ=255) tCCGCGCAACCCCGCCGGCGAAGCCGCTATTGCCAGTCCGCACGCGCGCAAACCGGTAGCCGATCCGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 8:887309/150‑1 (MQ=14) ccgccaccccgccgGCGCAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGaa < 7:220417/143‑1 (MQ=17) cgcaccccccctccGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAATCTGGAACACCAACAGGCTAATGCGGATGCAGAAGAACAGGTGTTTCCGCGCATATCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa < 7:494855/138‑1 (MQ=11) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGACCAGc > 8:866638/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACATCAACAGCAACACGATAATGCGGAGCCAGAAGAAAATGTTGATCCGCGCAAAGCAGCCGTCGAAGAGGATATTGAACGAGCCAAAGCCCGCAAggagcggcagc > 1:1518462/1‑141 (MQ=14) aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCAAAAGCACGCaaccgcgcacagc > 4:417785/1‑139 (MQ=17) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTCGACCAGCagc > 2:1309460/1‑148 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCACGACCAGCAACAgg > 3:144605/1‑151 (MQ=17) ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAACGCACGCAAGCTCGCCCAGCACCAGGc > 5:1322404/1‑151 (MQ=17) cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGATCAGCAACAGGCt > 6:24932/1‑151 (MQ=255) cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCACGAACAGCAACAGGCt > 3:79717/1‑151 (MQ=255) gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCCCTCAAGCTGGAACAGCATCAGGCt > 1:655762/1‑150 (MQ=17) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCCAAGCACGCAAGCTGGAACAGCAACAGGCTat > 1:356320/1‑150 (MQ=255) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTa > 1:182594/1‑150 (MQ=255) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTa > 2:595767/1‑150 (MQ=255) cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCAAGAAACCACGAACAGCAACAGGATaa > 4:1175802/1‑150 (MQ=21) gtttgcGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg > 3:156658/6‑151 (MQ=255) gAAGCGTCTAGTCCCCGCGGCACAGCGCGCAAACGGGCACCGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg < 7:708806/151‑1 (MQ=14) gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGCACAGCACCAGGCtca > 8:417062/1‑147 (MQ=255) ccccGCTACTGCCCGCGCCAAAGCGCGCATTTTTTATCACCAACACGCTACTTCCGAGCAAGACGATTAGTGAGATCAGCGCACAGGTGCGCTCGAACGCTCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCg < 7:1071774/149‑1 (MQ=2) agcagcTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTaa < 1:133452/51‑1 (MQ=255) cGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAGCAGGCTAATCCGGtc > 3:243164/1‑150 (MQ=255) cGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCATCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGCACAGCACCAGGCTAATGCGGt > 5:544158/1‑150 (MQ=255) cGCTATTGCCCGAGCCAAAGCGAGCAAACCGGAACAGCAACCCGCTAATGCGGACCCAGAAGAACAGCAAGATCCGCGCAAAGCTCCAGTCGACGCGGCTATTGAAAGCGCCAAAACACGCAACAACGAAAAGCAACAgacaaaaaagca > 2:769417/1‑139 (MQ=255) cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGAGGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGACCAGCACCAGGCTATTGCGGTccc > 7:96850/1‑151 (MQ=25) tATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc > 6:750903/1‑150 (MQ=255) tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGAAAGCTCGAACAGCAACAGGCTAATGCGGTAcc > 2:159321/1‑150 (MQ=255) ttGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATAGAACGGAACAGCGACCTCAAGCGAAAACAGCAACAGGATAATggagaaca > 3:1480236/1‑141 (MQ=0) gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCGAAAGCACGAAAGCACGCACAGCACCAGGATAAAGCGGTACAagaa > 3:859276/1‑150 (MQ=21) gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGCCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAACCTCGAACAGCACAAGGCTAATGCCGAACCagaa > 3:1015171/1‑150 (MQ=25) cccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTCCCaga > 5:530970/1‑148 (MQ=255) gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGAGCCAAAGCACGAAAGCTCGAACAGCAAAAGGATAATGCGGTACAataagacc > 3:1135129/1‑148 (MQ=25) gCCAAAGCTCTCAAACTTGAACAGCAACCGGATAATGCGGATACAGAAGAACATGTTGATCCTCGCAAAGCTGCCGTCTAATCGGCTATTGCACGAGCCAAAGCACGCAATCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAgg < 4:407054/151‑1 (MQ=17) cAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTGGCACAGCAGCAGGCTAATGCGGTGCCAGAAGACCAGttt > 1:878443/1‑151 (MQ=37) aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGTGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAAGCAAGCAGGAACAGCAACAGGGTCATGCGGTAGCAGAAGTACAGGttt > 4:1084196/1‑150 (MQ=25) aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAGTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTg > 6:321591/1‑151 (MQ=255) cgcgcAACCGGGAACAGCAACCGGCTATTTTGGAGCCAGAAGACGAGTTCGAACCGGGGAATGAGTCCGTCGATGTCTGTATTGGTCTCTTCATAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATcc < 8:161857/151‑1 (MQ=9) cgcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTCAtac > 5:96815/1‑149 (MQ=255) cgcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGGTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCACCCGGCTAATGCGGTACCAGAAGCACAGGTTGATcc > 7:71427/1‑151 (MQ=18) gcgcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCGGTACCAGAAGCACAGGTTGATccc > 4:348007/1‑150 (MQ=255) | GATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCG > NC_000913/1708767‑1709060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |