Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,4670AC26.3% 245.8 / 106.7 115intergenic (+4/‑30)metZ/metWtRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (6/78);  new base C (0/30);  total (7/108)
Fisher's exact test for biased strand distribution p-value = 3.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01

Only 100 of 160 total aligned reads displayed.

CAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAA  >  NC_000913/2947318‑2947592
                                                                                                                                                      |                                                                                                                              
cAAATCCGTGATCGGGGTAAAACAAAGGTTGCAGGAAAACGCGAGCGGAGTATAGAGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaa                                                                                                                               <  6:336175/151‑1 (MQ=255)
cAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                >  3:109425/1‑150 (MQ=255)
 aaaTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGTAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCaaa                                                                                                                              <  1:920729/151‑1 (MQ=255)
 aaaTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatt                                                                                                                              >  6:364797/1‑149 (MQ=255)
 aaaTCCGTGATCGGCGTAAAAACAAGGTGGAATGAAAACGCGAGCGGAGTATAGACCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatt                                                                                                                              <  7:939701/151‑3 (MQ=18)
  aatgggTGATCGGGGTAAAAATAAGGTTGCATGAAAACGCGATCGGAGTATAGTGCGAA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                             <  1:1094402/146‑4 (MQ=21)
  aaTGCGTGATGGGGTTAAAATTAAGGTTGAATGAAAAATCTATCTTAGTATAGTGCGCT‑TCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattg                                                                                                                             <  1:281495/151‑4 (MQ=14)
   aTCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTGCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                            <  7:678320/151‑1 (MQ=255)
   aTCCGTGATCGGGGTAAAAAAAAGGGTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGGCGGGCGCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAt                                                                                                                            <  1:1188819/151‑1 (MQ=255)
     ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaa                                                                                                                           >  3:946527/1‑145 (MQ=255)
     ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAttt                                                                                                                          <  5:542969/151‑1 (MQ=255)
     ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                           <  7:1528916/150‑1 (MQ=255)
     ccGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAAttt                                                                                                                          >  1:444141/1‑151 (MQ=255)
      gggtaTCGGGTTATAATAAAGGTTGCATGAAAAATCGTGCGGTGTATAGTGGGCC‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaaca                                                                                                                         <  7:180052/147‑8 (MQ=14)
      cGTGATCGGGGTAATAAAACGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtg                                                                                                                         <  2:1040310/151‑1 (MQ=255)
      cGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatagaac                                                                                                                          >  5:1508040/1‑144 (MQ=255)
      cGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatagaaa                                                                                                                          >  4:1153857/1‑144 (MQ=255)
       gttaTCGGGTTAAAAAAAAGGGTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                       <  1:1388222/148‑1 (MQ=18)
       gTGATCGGGGTAAAATAAAGGTTGAATGAAAACTAGATCGTAGTATATTTCGCA‑TCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTtgat                                                                                                                       <  1:1427101/151‑1 (MQ=17)
       gTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaatcataa                                                                                                                         >  5:249618/1‑144 (MQ=255)
          atggggtTAAAAAAAAGGTTGAATGAAAAATAGAGGGTTGTATATTGCGCA‑TACTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccct                                                                                                                     <  2:558423/148‑12 (MQ=11)
          aTCGTGTTAAAATAACGGTTGAATGAAAAAGCTAGAGTAGTATATTCCGAT‑TACACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGaa                                                                                                                    <  3:1435364/151‑1 (MQ=11)
          aTCGTGGTAAAAAAAAGGTTGCATGAAAACGCTAGCGGTGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccct                                                                                                                     <  1:661293/151‑12 (MQ=18)
          aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccct                                                                                                                     >  5:1046673/1‑140 (MQ=255)
            ggggtTAAAAAAAAGGGTGCATGAAAACGCGAGTGTAGTATA‑CACGCACTCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGt                                                                                                                  <  8:1325042/150‑1 (MQ=14)
            ggggaTAAAAACAAGGTTGCATGAAAAATAGAGAGGAGTATTGTGCGCA‑TCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGATGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGt                                                                                                                  <  7:1191480/150‑1 (MQ=14)
            cGGGGTAAAAATAAGGTTGCATGAAAACGCGATCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGt                                                                                                                  <  7:1356403/151‑1 (MQ=255)
            cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattcaaccccga                                                                                                                     >  5:1166805/1‑138 (MQ=255)
            cGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGaa                                                                                                                    <  1:1526569/150‑1 (MQ=255)
             ggggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccctacc                                                                                                                  >  6:540360/1‑137 (MQ=255)
             ggggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGt                                                                                                                  <  6:280416/151‑1 (MQ=255)
             ggggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAATaaaaagagattaatt                                                                                                                  >  1:519120/1‑140 (MQ=255)
              tggTAAAAAAAAGGTTGCATGAAAACTCTATCGTTGTATAGTGCGCA‑TCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaacaccct                                                                                                                     <  2:530763/146‑12 (MQ=17)
              gggTAAAAAAAAGGTTGCATGAAACCGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGGGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑a                                                                                                                <  6:889454/151‑1 (MQ=255)
              gggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaagaccct                                                                                                                     >  5:532303/1‑136 (MQ=255)
               ggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aa                                                                                                               <  8:1174816/151‑1 (MQ=255)
               ggTAAAAAAAAGGTTCCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aa                                                                                                               <  2:1130779/151‑1 (MQ=255)
                gTATAAAATAGGTTGCATGAAAACGCGAGCGGAGTATAGTGGGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCGCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                              <  2:1579398/151‑1 (MQ=255)
                gTAAAAAAACGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                              <  2:1127969/151‑1 (MQ=255)
                gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                              <  7:13782/151‑1 (MQ=255)
                 aaacataaaGGTTGCATGAATAAGCTATCGCAGTAGAGTGCGCC‑TCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaa                                                                                                             <  1:388759/144‑2 (MQ=11)
                  aaaaacaaCGGTGAAAGAAAAAGCGTTCGGAGTATTGTTCGCA‑TCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaag                                                                                                            <  7:1325350/150‑3 (MQ=11)
                  aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTATCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGc                                                                                                            <  3:882707/151‑1 (MQ=255)
                  aaaaaaaaGGTTGCAGGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                             <  2:765931/150‑1 (MQ=255)
                    aaaaaaGGGTCCATGAAAACCCGAGCGGAGTATAGTCCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagcag                                                                                                         <  6:942956/151‑6 (MQ=14)
                     ataaaGGTGGCATGAAAACTCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGt                                                                                                         <  8:706991/149‑1 (MQ=17)
                     aaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGt                                                                                                         <  1:349063/151‑1 (MQ=255)
                      acaaGGTTGCTTGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  1:1314121/149‑1 (MQ=255)
                      aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  2:1473439/151‑1 (MQ=255)
                      aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  7:852197/151‑1 (MQ=255)
                      aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  4:1198598/151‑1 (MQ=255)
                      aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  4:429581/151‑1 (MQ=255)
                      aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAAACCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  2:1333044/151‑1 (MQ=255)
                      aaaaGGTGGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGGAGCTCGTCGGGCTCATATCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                        <  6:877548/151‑1 (MQ=255)
                       aaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTAc                                                                                                       <  4:505078/151‑1 (MQ=255)
                        aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                             >  4:748431/1‑144 (MQ=255)
                        aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                             <  7:750875/144‑1 (MQ=255)
                        aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACg                                                                                                      <  5:793222/151‑1 (MQ=255)
                        aaGGTTGCAGGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTCGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTTATGAAGT‑AAAGCAGTACg                                                                                                      <  6:1056340/151‑1 (MQ=255)
                        aaGGTGGAATGAAAACTAGTGGGGAGTATAGTGGGAA‑TCCTCGGACGCGGGGTGGAGCTGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCGGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACg                                                                                                      <  2:1585287/151‑1 (MQ=11)
                        aaGGGTGAATGAAAACGAGATGGTAGTATACTGCGCC‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACg                                                                                                      <  7:1067603/151‑1 (MQ=11)
                        aaGCTTGAATGAAAACTCCAGCGCAGTATAGTCCGCC‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACg                                                                                                      <  5:1471783/151‑1 (MQ=11)
                         agggggCAGGAAAAAGCTAGCGGAGTATAGTGCGCA‑TCCCCTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACgg                                                                                                     <  8:850911/146‑1 (MQ=11)
                         aGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACgg                                                                                                     <  2:691524/151‑1 (MQ=255)
                          gggtGCATGAAACCGCGAGCGGAGTATACTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGt                                                                                                    <  4:687045/148‑1 (MQ=255)
                          ggTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGt                                                                                                    <  6:394317/151‑1 (MQ=255)
                           ggtGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTg                                                                                                   <  5:356654/149‑1 (MQ=255)
                           gTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTattgaac                                                                                                                          >  1:69694/1‑123 (MQ=255)
                           gTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTg                                                                                                   <  8:925126/151‑1 (MQ=255)
                           gTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGGCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTg                                                                                                   <  8:500044/151‑1 (MQ=255)
                            gtGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGa                                                                                                  <  4:984344/150‑1 (MQ=255)
                             tGCATGAATACGCGAGCGGAGTTTAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATATCCCGAAGGTCGTCGGTTCAAATCCGGCGCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGa                                                                                                  <  3:50041/150‑1 (MQ=255)
                              gCATGAAAACGCTAGCGGAGTATAGTGCGCA‑TCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcg                                                                                                <  2:582146/151‑1 (MQ=14)
                               aaTGAAAACGCGATCGGAGTATAGTGCGCA‑TCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgc                                                                                               <  8:848549/150‑1 (MQ=14)
                                aTGAAAACGCGAGCGGAGTATATTGCGCA‑TCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgcg                                                                                              <  8:445339/151‑1 (MQ=14)
                                 agaattcgctAGCGGAGTAGATTCGGCT‑TCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCgg                                                                                             <  3:893043/145‑1 (MQ=11)
                                  gAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGGCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCggg                                                                                            <  7:1004850/151‑1 (MQ=255)
                                   aaaaCGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCACCCAATGAAAATTTCAGGAGTT‑AAAGCAGTACGGTGCCTCggct                                                                                           >  6:1511674/1‑149 (MQ=18)
                                   aaaaCGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCgggg                                                                                           <  2:1264168/151‑1 (MQ=255)
                                     aaCGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTg                                                                                         <  7:1157600/151‑1 (MQ=255)
                                       cgcgAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGa                                                                                       <  2:907053/151‑1 (MQ=255)
                                       cgcgAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCACCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGa                                                                                       <  7:578944/151‑1 (MQ=255)
                                       cgcgAGCGGAGTATAGGGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGa                                                                                       <  6:1396716/151‑1 (MQ=255)
                                       atatagtggAGTATTGTGGGCA‑TCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑a                                                                                                                <  3:592880/118‑1 (MQ=11)
                                        gcgAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGGCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGag                                                                                      <  3:209383/151‑1 (MQ=255)
                                        ccgAGCGGAGTACAGTGCGCA‑TGCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGGCGGGCTCATAACCCGAAGGTCGTCGGTGCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTCCGGGGACGCGGGGTGGag                                                                                      <  3:1366166/150‑1 (MQ=17)
                                         cgAGCGGAGTATAGTGCGCA‑TCCACCGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagc                                                                                     <  8:691707/151‑1 (MQ=255)
                                          gAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagca                                                                                    <  2:1065082/151‑1 (MQ=255)
                                          gAGCGGAGTATACTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCTTAACGCGAAGGTCGTGGGTGCAACTCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagca                                                                                    <  8:1535795/151‑1 (MQ=18)
                                           aGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatagaacac                                                                                                                        >  4:529339/1‑107 (MQ=255)
                                            gCGGAGGATAGGCCTCA‑TCCACGGACGCGGGGTGGAGCAGGCTGGTCGCTCGGCGGTCTCTTAACCCGAAGGGCGGCGGGGCCAATCCGGCCCCCGCAACCAATTAAAATGTGCTGAAGT‑CAAGCAGTACCGGGACGCGGGGTGGagcagc                                                                                  <  4:1225761/151‑1 (MQ=17)
                                               gAGTATAGTGCGCA‑TCCCCGGACGCGGGGGGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCGCGCAACCAATTAAAATTCGATGAAGT‑AACCCAGTACGGGGACGCGGGGTGGAGCAGCCTg                                                                               <  7:49460/151‑1 (MQ=17)
                                               gAGGATAGTGCGCA‑TACCCGGACGCTGTGGGGAGCAGCCTGTTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTGAAATCCCTCCCCCGCAACCAATTAAACTTTGATGAATT‑ATAGCACTACGGTGACGCGGGGTGGAGCAGCCTg                                                                               <  1:626534/151‑1 (MQ=14)
                                                   ataGGGCGCA‑TCCACGGACGCGGGTGGGAGCAGCGTGGTCGGTCTGCGCTCTATTAAGCCGAAGGTCGTCGCGGCAAATCCGTCACCCTCAAACAATTAAACTTTGATGAAGT‑AACGCAGTACCGTGACGCGGGGTGGAGCAGCCTGGTAg                                                                           <  6:753991/151‑1 (MQ=12)
                                                      gtgaccA‑TCCACGGAATCGGTGGGGAGCAGCGTTGTTGCTCGGCGGCCTCATAACCCCAAGGGCGGCGCGTCAAAACCGCCCGCCGCAACCAAATAAAATTTGAAGAATT‑AAACCACTCCCGTGACGCGGGGTGGAGCAGCCTGGTAGCtc                                                                        <  5:298722/146‑1 (MQ=9)
                                                        gcgcA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatt                                                                                                                              >  6:1189565/1‑94 (MQ=255)
                                                        gcgaA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatt                                                                                                                              <  3:1185780/96‑3 (MQ=255)
                                                           gcctCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTatt                                                                                                                              <  8:56014/91‑3 (MQ=2)
                                                                              ggaggaGCCTGGTAGCTCGTCGGTCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAATTGTGATGAAGT‑ATAGCATTACTGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGgtc                                                 <  4:1154854/151‑1 (MQ=11)
                                                                                                                               aaaTCCGGCCCCCGCAACCAATTAAAAAATGATCAAGA‑AAATCAGTAATTTGACGCGGTGTGGAGAATACTCGGAGCTCGGAGGGCTGATAACGCGCAGGTCGTCGCTTCACATCAGCCCGCAGCAAACAATaaatgatcagcctgtct  >  8:791089/1‑135 (MQ=2)
                                                                                                                                                      |                                                                                                                              
CAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCA‑TCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAA  >  NC_000913/2947318‑2947592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑