New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 781446242 (0.570)49 (0.130) 33/260 31.8 15.5% intergenic (+2/‑131) lysZ/lysQ tRNA‑Lys/tRNA‑Lys
?NC_000913 781811 = 326 (0.890)intergenic (+159/‑274) lysQ/nadA tRNA‑Lys/quinolinate synthase, subunit A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 258 total aligned reads displayed.

CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGT  >  NC_000913/781297‑781596
                                                                                                                                                     |                                                                                                                                                      
cgaGTCATCCTGCACGACCCACCAATCTAAAAGATGGCCCCCGAGTAAAAATCTTTCAGGTACCACCCGTATGGGTCGGTAGGTCAGTTGGTAGAGCAGGTGACTTTTAATCAATAGGTCGCAGGTGCGAATCATGAACGACCCACCAAtt                                                                                                                                                       >  4:419886/1‑151 (MQ=25)
 gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAttt                                                                                                                                                      <  1:417211/151‑1 (MQ=255)
         cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGACGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaaaaagc                                                                                                                                              >  4:1417059/1‑146 (MQ=255)
          tGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAGTTTTAATCAAGTGGTCGCAGGGTCTAATCCTCCACGACCCACCATTTTAAAggtggg                                                                                                                                             >  8:417322/1‑150 (MQ=37)
           gCACGACCCACCAATGTTAAAGATTGGCCGCGAGTAAAAAACTTTCAGCTAACACCAGTATGAGACGTTAGCTCAGTTGGTAGAGCAGTTGAGTTTTAATCAATTGTTAGAAAATTAGAATCCTGCACGACCCAGCAATGTaaaaatgctg                                                                                                                                            >  6:109847/1‑144 (MQ=18)
            cACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaagagggcc                                                                                                                                           >  8:1142599/1‑143 (MQ=255)
            cACGACCAACCAATCTTAACCAATGGACCCTCGTAAATTTCTTTCAGGCCACACCCGTAGCGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                                                                                                           <  5:344491/151‑1 (MQ=17)
               gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTg                                                                                                                                        >  8:1284995/1‑151 (MQ=255)
               gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTg                                                                                                                                        >  5:741603/1‑151 (MQ=255)
                aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaaaaagcgaacta                                                                                                                                        >  1:1097074/1‑139 (MQ=255)
                  ccaccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                                                                                                                     <  4:1037286/151‑1 (MQ=255)
                   caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTCTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                                                                                                    <  7:1123768/151‑1 (MQ=255)
                   caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTat                                                                                                                                    >  5:1268146/1‑150 (MQ=255)
                    accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                                                                                                      >  3:1053489/1‑148 (MQ=255)
                      caATCTTAAAGATTGGCCCCTATTAAAAATATTTCAGCTAACACCGGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTa                                                                                                                                                     <  7:991309/131‑1 (MQ=18)
                         tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                                                                                                              >  2:1096442/1‑151 (MQ=255)
                            tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc                                                                                                                               <  4:1630542/147‑1 (MQ=255)
                            tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                                                                                                             <  1:1440749/149‑1 (MQ=255)
                             aatgATGGGCCCCGCGTAAAAATCTCTCACGCACCACCCCCAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                                                                                                          <  8:477475/148‑1 (MQ=18)
                               aGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAgg                                                                                                                        <  1:665072/151‑1 (MQ=255)
                                         cGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGc                                                                                                              >  6:532291/1‑151 (MQ=255)
                                            gTAAAAATCTTTAATTTAAAACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCTCAGGTTCTAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGtt                                                                                                           <  4:817750/151‑1 (MQ=21)
                                              aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAGATCGTAACAGGGTCGTATACTGAAAGACACTGCAAATAAATGGTGGTGACGGGTGGAGACCGTGAATTATAAAAATGCGtt                                                                                                           >  1:770624/1‑149 (MQ=12)
                                                      ttcatttAACACCCGTATGGGTCGTTAGCTCAGTTGTTAGATCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACg                                                                                                    <  4:964228/142‑1 (MQ=255)
                                                      ttCCGGGAACCCCCGTTTGGGTCGTTTGCTGAGTTGGTAGAGCAGGTGACTGTTAATAAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAAGTTGCGTTAGCAACGGc                                                                                                  <  3:1413534/150‑1 (MQ=21)
                                                      ttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTTGTAGAGCAGTTGACTTTTAATCAATTTGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTTGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGc                                                                                                  <  1:1554311/150‑1 (MQ=255)
                                                      ttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                                                                                                     <  7:272094/147‑1 (MQ=255)
                                                       taaGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTACACCAGTTCACTTTAACTCAATTGTTCGCAGGTTCTAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGACAACGTGAAGGATAACGTTGCGTTAGCAACGGcc                                                                                                 <  1:1193525/148‑1 (MQ=21)
                                                        cAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGGCCg                                                                                               <  7:627257/151‑1 (MQ=255)
                                                          ggTAACCCCCGTATGGGGCGTTAGCTCAGTTGGTAGCGCAGTTGACTTTTAATCATTTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGaa                                                                                             <  5:17539/151‑1 (MQ=255)
                                                                 cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTTGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAACAGCTTACTGCAAGAGAACGTGAAGTATAACGTTGAGTTAAAAAATGCCCCAAGGGCg                                                                                        >  5:1499170/1‑149 (MQ=17)
                                                                   attattcatgtttAGCTCAGTTGGTATAGAAGTTTACTTTTATTCATTTGGTCGCAGGTTCTAATCCTGCACGACCCACCTTTTTAAAGGTTGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc                                                                                    <  2:81520/140‑1 (MQ=18)
                                                                    gtacgcgtctttatatCATTTGGTCGACAATTTTACATTTAATCAATTGGTTGCTTGTTGTAATCCTGCACGACCAACAAATTTAAATTTGTTTACTGGTAGATAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACg                                                                                   <  2:241535/136‑1 (MQ=16)
                                                                     ctcgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                                                                                                            >  3:676189/4‑109 (MQ=255)
                                                                         ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTc                                                                              <  6:1299858/151‑1 (MQ=255)
                                                                          gTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTCGTAACTGGTAGAGaa                                                                                                                                >  4:1220082/1‑100 (MQ=255)
                                                                           gcGTTAGCTCATGTGTAATAGCTGTTGACTTTTAATCAATTGGTCGAAGGTGCTAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGa                                                                            <  3:548960/150‑1 (MQ=18)
                                                                                acatCAGTTGCTAGAGTTGGTCACATTTAATCAATTGGTCGCTGGTTCGAATCCTGCACGACCCACCAATTTAAATGTTGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCAt                                                                       <  2:1318257/148‑1 (MQ=18)
                                                                                aGCTCAGTTGGTAGCGCCGTGGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCACGCCCCACCAATTTAAAGGTGGTTACTGGTAGAGACCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCa                                                                        <  8:639922/150‑1 (MQ=18)
                                                                                   acactggttttcgCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCt                                                                    <  1:1671608/139‑1 (MQ=255)
                                                                                    cAGTTGGTACAGCCGTGGACTTTTAATCAATTGGGCGCAGGTGCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTg                                                                   <  5:72391/151‑1 (MQ=255)
                                                                                       tttttAGAGCAGTTGACTTTTAATCAATTGTGCGCAGGTTGGAATCCTGCACTACCCACCAATTTAAAGGTGGTTACTGGTATAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCa                                                                 <  8:238879/146‑1 (MQ=18)
                                                                                        tGGTAGAGCAGGTGACGTTTACTCAATTGGTCGCATGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGGTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                <  5:1036362/150‑1 (MQ=255)
                                                                                             cagCAGTTTACTTTTAATCATTTGGTCGCTGGTTCCAATCCTCCACGACCCACCAATTTAAAGTTGGTTACTGTTAGATAACGTGAAGTATAACTTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACcca                                                          <  1:96357/150‑1 (MQ=18)
                                                                                                caggccaCTTTTAATCAATTGGTCGCAGGTTCTAATCCTTAACTACCCACCAATTTAAAGTTGGATACTGGTAGATAACGTGAAGGATAACGTTGCGTTAGCAACTGCCCTAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccacca                                                       <  2:156773/145‑1 (MQ=17)
                                                                                                cAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGATAACGTGAAGGa                                                                                                                       >  7:1527216/1‑87 (MQ=255)
                                                                                                 cgTTGACTTTTATTCAATTGGTCGCAGGTTCGATTCCTGCAGGACCCACCAATTTAAAGGTGGTTACTGGTTGAGAAGGTGAAGTTTAACGTTGCGTTAGGAACGGCCCGAAGGGCGAGAGGAAGTCGAGTCATCCTGCACGACCCACCAt                                                      <  3:423915/150‑1 (MQ=18)
                                                                                                    tGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCt                                                   >  1:159790/1‑151 (MQ=255)
                                                                                                    tGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGAGGTAACTGGTAGAGAAGTTGAAGGATAACGTTGCGTGAGAAAGTGGCCGAAGGGCGAGACGAAGTAGACTCATACTGCAAGAaccacccacc                                                    >  6:211894/1‑146 (MQ=17)
                                                                                                     caatactAATCCATTGCTAGCATGTCCGAACCCTGCTCTACCCAGCTATTTAAACGTTCTTACTGTTATTTAACGTGAAGGATAACGTTGCGTTAGCAACTGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCt                                                   <  1:884656/144‑1 (MQ=12)
                                                                                                       cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaa                                                                                                                                                    >  1:1127103/1‑51 (MQ=35)
                                                                                                       cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCCGCCTGCACGACccaccaatataa                                                 >  7:1630631/1‑144 (MQ=255)
                                                                                                         ttacaTCAATTGGGGTCAGGTTCGAATACTGCACGTCCCACCAAATTAAACGGTGAAACTGCTAGACAACGTGAAGGATAACGTTGCGGTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAAt                                               <  3:1217551/146‑1 (MQ=17)
                                                                                                         gctAATCACTTGGTCTGATGTGCGAATCCAGCACGAACCACCAATTTAAAGGCGTTTAGTGCTAGACCACGTGATCGATACCGATGCGCTAGCAACGGCCCGACGGGCGAGACGCAGTCGAGTCATCCTGCACGACCCACCATCCTGAATg                                              <  8:177919/149‑1 (MQ=16)
                                                                                                            aaTCAATTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGCTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAt                                            <  8:1500669/150‑1 (MQ=255)
                                                                                                               cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGCAGCTTACTGATAGAGAACGTGAAGGATAACGTAGCGTTAGAAAAGGCCCGAAGGGCGAGCCGAACTCGACTCCTCCTGCACCACCCACCAGACTAAATGagaacc                                        >  4:348228/1‑146 (MQ=18)
                                                                                                                 tttGGTCTAAGTTTCGAATCCTGCAGTACCCACAAATTTAATTTTGGTTACTGTTTTAGATCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAATTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAg                                        <  6:1183154/148‑1 (MQ=18)
                                                                                                                  ttGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGCTGCTTACTGGTTGAGAACGTGAAGGATAACGTTGCGGTAGCACCGGCCCGAAGGGCGAGACGAAGGCGAGTCCTCCTGCACGCCCCACCATGCGGAATCATTAAGgcc                                     >  8:1634197/1‑150 (MQ=21)
                                                                                                                   tGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgca                                     <  8:854567/150‑1 (MQ=255)
                                                                                                                    ggTCGTTGGTTGGATTCGTGCACGACCCACAATTTTAAATTTGGTTACTGTTAGTTATCGTGAATTATATCGTTTCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgcagc                                   <  1:737599/151‑1 (MQ=18)
                                                                                                                      tCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGAGCTGACTAGTAGAGAACTTGAAGTATAACCTAGCGTAAGAAAAGCCACGAAGGGCTCGCAGAAGACGAGTCATCCTGAACGACCCACCATCCTGAATGATTAAGGCAGCAt                                 >  2:806163/1‑151 (MQ=255)
                                                                                                                      tCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGAAGCTTACTGGAAGAGAAATTGAAGTATAACCTTGCGTTAGCAACGGCCAGAAGTGCGAGAAGAAGTAGAGTCATCCTGCACGACCCACCATCATGAATGAATAAGGAAGCAt                                 >  1:35830/1‑151 (MQ=21)
                                                                                                                       cgccccggccaaTCCTGCACGACCCATGAATTTAATGGTGGTTAGTGCTAGTCTACGGTATGTATTCAGTTGCGTTAGGAAGGGGCCGATTGGGTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATa                                <  3:198100/141‑1 (MQ=255)
                                                                                                                       cccAGGTGCGAAGCCTGCACGACCCACCAATTTAAAGGGGGTTACTGTTACCGAACGTGATGGATAACGTGGCGTTACCAAGGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATa                                <  5:900142/149‑1 (MQ=25)
                                                                                                                        gcagtttgtaaTCCTGAACGAGCGACAAATTACTAGGTGGTTCGTGATTGAAATCGTGAAGTTTAAGGTTGCGATATCTACGGCGCGCAGCGCGAGAGGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATaa                               <  5:1426840/142‑1 (MQ=16)
                                                                                                                          aGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTTACTGGAAGAGAAGGTGAAGGATAACGTTTAGTTAGAAACTGCCCGAAGGGCGAGACGAAGTCGCGTCATCCTGCACGACCCCAAATCCTGAATCATTAAGGCAGCATAATc                             >  3:35828/1‑151 (MQ=25)
                                                                                                                           ggTTGGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATcc                            <  3:1476329/151‑1 (MQ=255)
                                                                                                                              tCGAATCCTGCACGACCCACCAATTTAAAGGTGTTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCg                          <  8:357070/150‑1 (MQ=255)
                                                                                                                               ttaaTCCAGCACGAGCTTACAATTTAAAAGTTTATACTGTTATTTAACGTGAATTATAAAGTTGCGTTAGCAACTGGCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGc                         <  2:370065/148‑1 (MQ=18)
                                                                                                                                gAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGAACGACCCCCCATCCTGAATGATTAAGGCAGCATAATCCCGCa                        >  8:577128/1‑150 (MQ=255)
                                                                                                                                gAATCCTGCACGACACACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCa                        >  2:4737/1‑150 (MQ=255)
                                                                                                                                  aTCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCGTGCAAGACCCACCATCCTGAATGATTAATGCAGCATAATCCCGCAAgg                     >  2:895583/1‑151 (MQ=255)
                                                                                                                                  aTCCTGCACGACCAACCAATTTAAAAGATGTAACTGGTATTGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAgg                     <  5:1143532/151‑1 (MQ=21)
                                                                                                                                    cctcgaCGACCCACCCTTTTAAATGATCTTAGTGTTCGCGAACGTGAAGGTTAACTTTGCGTTTGCAACGCGCCGATGGGCGAGACGAACTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAggg                    <  7:755356/145‑1 (MQ=21)
                                                                                                                                    ccTGCAGGACCAACAAATTTAAAGGTGTTTATTGTTTTCTAACGTGATGGATAACGTTGCTTTAGAAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAggg                    <  8:1224333/150‑1 (MQ=21)
                                                                                                                                       gcactagcgacaaaTTTAAAGCTGGTTCCTGTTAGACAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTc                 <  8:794226/138‑1 (MQ=25)
                                                                                                                                       gCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTTAAGGATAACGTTGCGGTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTc                 <  3:23504/150‑1 (MQ=255)
                                                                                                                                        cACGACCCACCAATTTAAAGGAGGTTACTGGTCGAGACCGGGAAGGATAACGGTGCGGTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGt               <  3:641334/151‑1 (MQ=37)
                                                                                                                                         aCGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt              >  3:469147/1‑151 (MQ=255)
                                                                                                                                         aCGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTAGAGTCATCCAGCACGACCCACCAAACTAAAACATCAAAGCAGCAGAAACACGAAAagggaa                 >  2:57883/1‑146 (MQ=18)
                                                                                                                                          aaaCCCACCAATTTATCGTGTGTTCCTGGTCGCGATGGTGAAGGATAACGTTGGGTTACCAACGGCCCGACGTGCGAGACCAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTa             <  5:586030/149‑1 (MQ=21)
                                                                                                                                           gACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt              >  2:991618/1‑149 (MQ=255)
                                                                                                                                            aCCCACCAATTTATAGTTGTTTACTTCTAGAGAAAGTGAAGGATAACGTTTCGCTATTAACGTCCCGATTGGCGAGAGGAATTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTa             <  6:413009/149‑1 (MQ=25)
                                                                                                                                            aCCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGc           >  3:927108/1‑151 (MQ=255)
                                                                                                                                              ccaccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAGCGACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGGCGTTAGcgc         >  7:302742/1‑149 (MQ=255)
                                                                                                                                              ccaccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCt          >  6:986947/1‑150 (MQ=255)
                                                                                                                                              ccaccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTc         >  5:1120308/1‑151 (MQ=255)
                                                                                                                                               aaccaATTTAAAGGTGGTTACTGGTAGAGACCGTCAAGGATAAGGTTGCGTTAGCAAGGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCa        <  5:429166/150‑1 (MQ=255)
                                                                                                                                                tctattttAATGGTGTTTACTTGTAGAGTATGTGATGGTTATTGTTGCGTTAGCAACGGGGCGATGTGCGAGAGGTAGTCGAGTCATCCTGCACGAGCGTGCTTCGTGAATGATTAAGGCAGCATAATCCGGCAAGGGGTCGTTAGCTCa        <  1:1448969/145‑1 (MQ=255)
                                                                                                                                                accaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATGCTCAATGAGGAAGGAAGCATAATCCCGCAAGCGGTCGTGTGCTCac       >  5:1184501/1‑150 (MQ=21)
                                                                                                                                                accaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTc         >  1:1350526/1‑149 (MQ=255)
                                                                                                                                                 ccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGt      >  6:711656/1‑151 (MQ=255)
                                                                                                                                                 ccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTCAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGt      <  6:803629/151‑1 (MQ=255)
                                                                                                                                                 ccaATTTAAAGCTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCTTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGt      <  7:488018/151‑1 (MQ=255)
                                                                                                                                                  caATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGtt     >  4:505898/1‑151 (MQ=255)
                                                                                                                                                   aaTTTAAATGTTTTTTCTGGTCGTGAACGTGATTGATAACGTTGGGTTAGCAACGGCCCGAAGGGCGAGACGAATTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTg    <  4:1003438/151‑1 (MQ=25)
                                                                                                                                                   aaTTTAAAGGGGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTg    <  7:947825/151‑1 (MQ=255)
                                                                                                                                                    aTTTAAAGTTGGTTACTGGTAGAGAACCTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGGCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTgg   <  3:89252/151‑1 (MQ=255)
                                                                                                                                                    aTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATACTGAAAGAGTACGGCAGCAGAATCCCGGATGGGGTCGTTAGCTCAGTTgg   >  3:114500/1‑151 (MQ=25)
                                                                                                                                                     tttAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATACTCCCGCAAGGGGTCGGTAGCTCAGTTGGt  >  8:760960/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGT  >  NC_000913/781297‑781596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.