Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,091,173 IS5 (–) +4 bp coding (1114‑1117/2424 nt) pgaA ← biofilm adhesin polysaccharide PGA secretin; OM porin; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)365 (0.870) 191/300 0.5 96.0% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 1091176 15 (0.040)coding (1114/2424 nt) pgaA biofilm adhesin polysaccharide PGA secretin; OM porin; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein
* ? NC_000913 = 275149NA (NA)358 (0.850) 196/300 0.3 95.9% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 1091173 = 15 (0.040)coding (1117/2424 nt) pgaA biofilm adhesin polysaccharide PGA secretin; OM porin; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein

Only 100 of 751 total aligned reads displayed.

CATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGAT  >  NC_000913/1091024‑1091322
                                                                                                                                                     |                                                                                                                                                     
cATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGtt                                                                                                                                                      <  5:682126/151‑1 (MQ=255)
   ttCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAg                                                                                                                                                    <  1:16296/150‑1 (MQ=255)
   ttCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAg                                                                                                                                                    <  8:51528/150‑1 (MQ=255)
     cAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGgg                                                                                                                                                  >  5:504439‑M2/1‑148 (MQ=255)
     acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgcgc                                                                                                                                                 <  3:724414‑M2/7‑1 (MQ=255)
     acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgcgc                                                                                                                                                 >  8:1366603‑M2/145‑151 (MQ=255)
          tGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtg                                                                                                                                            <  2:1042010‑M2/151‑9 (MQ=255)
             atctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGAt                                                                                                                                         >  1:1477028‑M2/137‑151 (MQ=255)
                    ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTc                                                                                                                                  >  7:1342138‑M2/130‑151 (MQ=255)
                    cATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcg                                                                                                                                  <  4:485271‑M2/151‑19 (MQ=255)
                       tACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcgggg                                                                                                                               <  5:383990‑M2/151‑22 (MQ=255)
                        ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCa                                                                                                                                 <  4:192314‑M2/23‑1 (MQ=255)
                        aCTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcgggg                                                                                                                               >  5:926565‑M2/1‑129 (MQ=255)
                         cTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcgggga                                                                                                                              <  4:1073716‑M2/150‑23 (MQ=255)
                            tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTcc                                                                                                                           >  2:1323435‑M2/122‑150 (MQ=255)
                            tatTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaatt                                                                                                                          <  5:272651‑M2/151‑27 (MQ=255)
                             atTTTGCTACGGTTGAGATAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagaggggaaattc                                                                                                                         <  7:319635‑M2/151‑28 (MQ=255)
                              ttttGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattct                                                                                                                        <  6:38262‑M2/151‑29 (MQ=255)
                              ttttGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattct                                                                                                                        <  4:618702‑M2/151‑29 (MQ=255)
                               cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGt                                                                                                                       >  7:1190113‑M2/119‑151 (MQ=255)
                                   gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCt                                                                                                                   >  8:369263‑M2/115‑151 (MQ=255)
                                   gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCt                                                                                                                   >  5:784052‑M2/115‑151 (MQ=255)
                                    gttactgctgaattcagtgtcggctaaggtaagttgatgactcatgatgaagcctgttctatgtatcaagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTg                                                                                                                  <  8:746856‑M2/38‑1 (MQ=255)
                                     ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGt                                                                                                                 >  1:1418454‑M2/113‑151 (MQ=255)
                                      tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGt                                                                                                                 <  2:1392303‑M2/39‑1 (MQ=255)
                                       actgctgaattgactgtcggcgaaggtaagtttatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCGGGATAATTTTCACTCTCCAGGTGGCTGTa                                                                                                                <  1:446197‑M2/40‑1 (MQ=255)
                                         tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTaaa                                                                                                              >  6:8654‑M2/109‑150 (MQ=255)
                                          gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTaaa                                                                                                              <  7:558204‑M2/42‑1 (MQ=255)
                                           gagagaAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                           >  3:514257‑M2/1‑110 (MQ=255)
                                            tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggatccagatgacaaacatgatctcatatcagggacttgttagcaccttacTTAGCGCGCCAGGATAATTTTCACTCTCCAGGTGGCTGTAAAaga                                                                                                           >  1:72514‑M2/106‑150 (MQ=255)
                                              aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGAt                                                                                                        <  7:1117813‑M2/48‑1 (MQ=255)
                                               gaAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                       <  6:959300‑M2/151‑46 (MQ=255)
                                               gaAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                       >  8:1492642‑M2/1‑106 (MQ=255)
                                                     tgtcggcgaaggtaagttgatgactcatgatgaaccctgtgctatggctccagatgacaaacatgatgtcatatcagggacttgtgcgcacgttccTTAGCGCGCCCGGATAATTTTAACTATCCGGGTGGCTGTAAAAGAGATCCGcaat                                                                                                 >  4:928303‑M2/97‑150 (MQ=255)
                                                          gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGAGAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGttctt                                                                                            >  1:1009944‑M2/92‑151 (MQ=255)
                                                            gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGttcttc                                                                                           >  5:1342294‑M2/90‑150 (MQ=255)
                                                             tGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                          <  6:459403‑M2/150‑59 (MQ=255)
                                                             aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCAt                                                                                         >  2:779611‑M2/89‑151 (MQ=255)
                                                               tAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                       <  7:1583245‑M2/151‑62 (MQ=255)
                                                                gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCgg                                                                                      <  2:971007‑M2/66‑1 (MQ=255)
                                                                  ccAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                    >  2:1560435‑M2/1‑87 (MQ=255)
                                                                   agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGAt                                                                                    >  1:537621‑M2/83‑150 (MQ=255)
                                                                     ggTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                 >  4:1542670‑M2/1‑84 (MQ=255)
                                                                     ggTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                 >  1:313242‑M2/1‑84 (MQ=255)
                                                                        aTCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc                                                                               >  3:1099147‑M2/1‑81 (MQ=255)
                                                                          gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCg                                                                             <  4:1444042‑M2/75‑1 (MQ=255)
                                                                          cATTCGGGATGCTCGTAGGCGTTCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                             >  1:1263499‑M2/1‑79 (MQ=255)
                                                                          cATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCg                                                                             <  4:1266322/150‑1 (MQ=255)
                                                                              catgatgaaccctgttgtatggctgcagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAAATTTCACTCTCCAGGTGCATGTAAAAGAGATCCGCAAGTACTTCAACGGATAAATCCGGGGc                                                                         >  4:1224611‑M2/72‑150 (MQ=255)
                                                                               gggATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGGGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                       >  6:206496‑M2/1‑74 (MQ=255)
                                                                                 gATGCTCGTAGGCGTGCGCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                     >  7:670552‑M2/1‑72 (MQ=255)
                                                                                 gATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                     >  3:912973‑M2/1‑72 (MQ=255)
                                                                                   tGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                   <  3:394505‑M2/151‑82 (MQ=255)
                                                                                    gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGt                                                                   <  3:181172‑M2/85‑1 (MQ=255)
                                                                                     aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGtct                                                                 <  6:1633507‑M2/87‑1 (MQ=255)
                                                                                        cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCt                                                              <  3:1228362‑M2/90‑1 (MQ=255)
                                                                                          tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGCCAATGGTCTCCTtg                                                            >  2:582950‑M2/60‑151 (MQ=255)
                                                                                           gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCtt                                                             <  3:1538149‑M2/91‑1 (MQ=255)
                                                                                            ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTtgtg                                                          >  4:787090‑M2/58‑151 (MQ=255)
                                                                                                gCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                       >  8:1215289‑M2/1‑57 (MQ=255)
                                                                                                atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGAt                                                        <  6:111352‑M2/96‑1 (MQ=255)
                                                                                                atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTATCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATaa                                                      <  5:1244799‑M2/98‑1 (MQ=255)
                                                                                                 cccATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                      <  7:8302‑M2/150‑95 (MQ=255)
                                                                                                  ccATTAACCGAAGGACAGTCTGCGATGTATTAATGGTATGGTCGGTGACAGTTATggaaggtgcgaataagctgggatattcttctcggctgactcagtcatttcatttcttcatgttttagccgattttttctcccgtaaatgccttgaa                                                    >  1:212713‑M2/1‑55 (MQ=255)
                                                                                                  ccATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                                    >  1:827419‑M2/1‑55 (MQ=255)
                                                                                                    ctccagatgacaaacatgatctcatatcaggcacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATaaa                                                     >  7:384850‑M2/50‑148 (MQ=255)
                                                                                                      tAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                 >  6:298484‑M2/1‑51 (MQ=255)
                                                                                                      ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAagag                                                 <  3:1407958‑M2/103‑1 (MQ=255)
                                                                                                       cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCt                                               <  1:660789‑M2/105‑1 (MQ=255)
                                                                                                        agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTc                                              <  2:1169816‑M2/106‑1 (MQ=255)
                                                                                                        aCCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                              >  2:1671563‑M2/1‑49 (MQ=255)
                                                                                                        aCCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagacgattttttctcccgtaaatgccttgaatcagcc                                              <  6:681300‑M2/151‑103 (MQ=255)
                                                                                                         gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAATAGCTCg                                             <  3:768756‑M2/107‑1 (MQ=255)
                                                                                                         ccGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                             >  6:1062250‑M2/1‑48 (MQ=255)
                                                                                                             acaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTc                                          >  8:857948‑M2/41‑150 (MQ=255)
                                                                                                              ggAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                        >  5:1517661‑M2/1‑43 (MQ=255)
                                                                                                              ggAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatggttgagccgattttttctcccgtaaatgccttgaatcagcatattt                                         <  4:295056‑M2/150‑108 (MQ=255)
                                                                                                                aacatgatctcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCatta                                      <  5:182216‑M2/114‑1 (MQ=255)
                                                                                                                   ggcggcGAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccg                                   >  7:471467‑M2/1‑38 (MQ=255)
                                                                                                                      ggcgAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                                <  6:598812‑M2/151‑117 (MQ=255)
                                                                                                                         tcatatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACtgtg                             >  8:198159‑M2/29‑151 (MQ=255)
                                                                                                                         gAAGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                             <  3:300651‑M2/151‑120 (MQ=255)
                                                                                                                          catatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACt                                <  5:1444460‑M2/120‑1 (MQ=255)
                                                                                                                          aaGTATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                            >  6:1197157‑M2/1‑31 (MQ=255)
                                                                                                                           atatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCt                           >  1:873799‑M2/27‑151 (MQ=255)
                                                                                                                            tatcagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCtt                          >  8:672238‑M2/26‑151 (MQ=255)
                                                                                                                             tATTAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                          >  6:761629‑M2/1‑28 (MQ=255)
                                                                                                                               ttAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                       <  5:1113167‑M2/151‑126 (MQ=255)
                                                                                                                               cagggacttgttcgcacgttccTCAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCttttt                       <  8:1450106‑M2/129‑1 (MQ=255)
                                                                                                                               cagggacttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCtttt                        <  8:1105406‑M2/128‑1 (MQ=255)
                                                                                                                                tAATGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                       >  4:696655‑M2/1‑25 (MQ=255)
                                                                                                                                   tGGTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                    <  2:348061‑M2/150‑129 (MQ=255)
                                                                                                                                     gTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaatttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                 >  7:1491800‑M2/1‑20 (MQ=255)
                                                                                                                                     gTATGTTGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                 >  6:1509509‑M2/1‑20 (MQ=255)
                                                                                                                                      ttgttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCtg                >  6:1416503‑M2/16‑151 (MQ=255)
                                                                                                                                        gttcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCtgat              <  5:1030371‑M2/138‑1 (MQ=255)
                                                                                                                                          ttGGGTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcattgaatcagcctatttagaccgtttcttcgccatttaaggcgtt             <  1:1049170‑M2/150‑136 (MQ=255)
                                                                                                                                          tcgcaccttccTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCtgatg             <  4:406345‑M2/139‑1 (MQ=255)
                                                                                                                                             ggTGACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc         >  8:1043155‑M2/1‑12 (MQ=255)
                                                                                                                                                gACAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca      >  8:432758‑M2/1‑9 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CATTTCAGCCTGAGGAAGATCATTACTATATTTTGCTACGGTTGAGAGAAACGAATGCCCCTGTAACCAGGTATCATTCGGGATGCTCGTAGGCGTGCCCATTAACCGAAGGAAAGGCGGCGAAGTATTAATGGTATGTTGGGTGACAGTTAGCGCGCCCGGATAATTTTCACTCTCCAGGTGGCTGTAAAAGAGATCCGCAAGTTCTTCATCGGATAAATCCGGGGCAATGGTCTCCTTGTGATAAAAGAGCTCGGTCATTATTGACTGTGCTTTTTTCGGCTGATGATCTTTGAGAT  >  NC_000913/1091024‑1091322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.