Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC28.6% 221.4 / 56.0 219R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (120/32);  new base C (57/4);  total (180/39)
Fisher's exact test for biased strand distribution p-value = 8.98e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 222 total aligned reads displayed.

AGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708754‑1709049
                                                                                                                                                   |                                                                                                                                                    
  aagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCCCGCACACCCGCCGGCGCACCCGCGATTGCCCGAGCCa                                                                                                                                                  >  7:520731/1‑150 (MQ=11)
   acaagaggcggATCCACGTAAACCGGCCGTAGTAGCCGCTATAGCCCGGGCCAAAGCACGCAACCTGGAACACCAACAGGCTAATCCCGACCCAGAACAACAGGGCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa                                                                                                                                                <  3:404218/141‑1 (MQ=11)
    ccccccgccGATCCCCGCAAACCCGCCGTAGAAGCAGCTATTTCCCGGGACAAATCGCGAAAGCTGCAACAGCATCTGGATAATTCCTAACAAGAACAAGATTTCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAg                                                                                                                                               <  8:601478/143‑1 (MQ=2)
      aCAGGTCGATCCGCGCAAAGCCGCCGTCGATGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGACGCCGCTATTGCCCGCGCCAAAgcc                                                                                                                                             >  7:838550/1‑150 (MQ=255)
        aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGAGCAAAAgcccg                                                                                                                                           >  6:782401/1‑151 (MQ=11)
            cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCAAGCAAGCACGAACAGCAACAGGCTAATGCAGATCCAGAACAACAGGTGGATCCGCTCAAAGCGGCAGTAGCAGAGGCTATTGCCCGAGcccaggccaaaaa                                                                                                                                        >  6:969409/1‑139 (MQ=11)
             gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCGAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAcgcgagaaacg                                                                                                                                      >  8:84048/1‑144 (MQ=14)
             gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGACGCCGCTATTGCCCGAGCGAAAGCGCTCAAAc                                                                                                                                      >  4:809191/1‑151 (MQ=255)
              aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGCTAGATCCGCGCAAAGCGGCCGTCGCCGCGGCTATTGCCCGCGCAAAAGCGAGCAAGCg                                                                                                                                     >  8:560268/1‑151 (MQ=11)
                ccccgccccgccgccCCCCAAGCCGCTAGCGCCCGCGCCAAAGCTCTCATGCTGGACCAGCAAGATGATAATGGGGAAGCTGTAGAACCGCGCGATGACGGGTCAGCCTCCGTCGAAGCCGCTATAGCCCGAGCCAAAGCGCGCAAACggg                                                                                                                                   <  7:604325/142‑1 (MQ=255)
                      aaaccggccctggAAGCCGCTATGGCACGTCCGCAAGCGAGCAACCTCGAAGCCCAACAGGCTAATCACGACCCAGAACAAGATGGCGATCCCCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGc                                                                                                                             <  7:248175/139‑1 (MQ=9)
                       aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGCGAACGCCCCAAAACCCGAACAGc                                                                                                                             >  2:1351285/1‑150 (MQ=14)
                           cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGAGCAAAAGCCAGAAACCGGGACCAGCAGCCg                                                                                                                        >  1:1161586/1‑151 (MQ=14)
                             ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGGAGAGCAACAGCCGAATTCGGAGCGACAGAAACAGGTAGATCCGCGCAAAGCCGCCGTCTAAGCGGATATTGCACGCGCCAAAGCGCGCAAGCggggagcggaagcggg                                                                                                                      >  3:743801/1‑138 (MQ=2)
                               ggcGAACCCGCTTTTACCCGGGGCAATGCAGTCAAGCGGGCACAGCAACCGTCTAATGCCGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa                                                                                                                    <  7:659223/149‑1 (MQ=14)
                               gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGGAGCGGCTCATGCCCGCGCCGAAGCGCCCTCACGCGAAGCGCAAGCGGCtc                                                                                                                    >  8:1115990/1‑150 (MQ=14)
                               gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCCAGGCCCGCAAACGGGACCAGCAGCAGGCtc                                                                                                                    >  3:322143/1‑150 (MQ=14)
                                tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa                                                                                                                    >  1:1505699/1‑150 (MQ=255)
                                 cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAGGCCCGCAAAGGGGAACAGCAGCAGGATAAt                                                                                                                  >  8:344408/1‑151 (MQ=11)
                                  gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTCGACGCGGCTATTGCCCGCGCGAACGCCCGCAAACGCGAACAGCACAAGGCTAATg                                                                                                                 >  3:940204/1‑151 (MQ=14)
                                      ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGCAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGCGAACAGCAGAAGGCTAAtcagg                                                                                                              >  5:1001208/1‑146 (MQ=14)
                                       cGCAATTGCACGGGACATACCACGCAAGCTGTAACCGCAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg                                                                                                            <  8:229357/151‑1 (MQ=14)
                                             tGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCAGAACGCCACACCGCCATGGACCGACACAAAGAGCCCAAAAGTGAACAGCACCCGGCTAAGCCGGAGCCaca                                                                                                       >  1:1571455/1‑148 (MQ=2)
                                             tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGCGCCAAAGCCCTCAAACGCGAACAGCAAAAGGCTAATCCCGAGCAaga                                                                                                       >  8:1692296/1‑150 (MQ=11)
                                             tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATACGCGCAAAGCGGCAGTGGACGCCGCTATTGCCCGCGCGAACGCCAGCAAACCGGCCCAGCACCAGGATATAGAGGAGCCaga                                                                                                       >  8:290661/1‑150 (MQ=9)
                                             tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCAAAGGCCCCAAAAGGCGACCAGCAGCCGGGTCAACCGGAGCCaga                                                                                                       >  7:1036191/1‑150 (MQ=14)
                                             tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCGAACGCCAGCAAACGGGAACAGCAACCGGATAATGCCGAGCCcga                                                                                                       >  1:1146936/1‑150 (MQ=14)
                                                     ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGAAGGCAACCCGGAACAGCTACAGTCTAATGAGGACCGAGAAGAAGAGGt                                                                                              >  5:919105/1‑151 (MQ=11)
                                                        aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGAAGCGGCTATTGCCCGAGCGAACGCGCTCAAACCGGCACAGCAGCAGGCTCAACCGGAGGCAGAAGACCATGttc                                                                                            >  3:1449612/1‑149 (MQ=11)
                                                        aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCCAAGCCCGCAAACGGGCACAGCACCAGGCTATTGAGGTCCCAGAAGCACACGtagg                                                                                           >  8:1642127/1‑148 (MQ=14)
                                                            aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGAGAAAAGAAGACGTCGAATCGGCAATACACACAGCAAAATCCCGCAAGCTGGAACAGCAAGCGTCTAATGAGGAGCCAGAAGAACAGGGTGATGcg                                                                                       >  3:191190/1‑151 (MQ=9)
                                                            aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACCCGCACAGCACCAGGCTCATGAGGAGCCAGAAGAACACGtggctc                                                                                         >  7:224916/1‑144 (MQ=11)
                                                                 aGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTTATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCac                                                                                  >  8:782354/1‑150 (MQ=255)
                                                                 aGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACCGGACCAGCAACAGGCTCATGCGGAGCAAGAAGAACAGGTAGATACCCGCa                                                                                   >  1:700606/1‑150 (MQ=11)
                                                                     ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGAGAAAACGGGACCAGCACCAGGCTAATGCGGAGCCAGAAGAACAGTTAGATCAGCGCAAAGCt                                                                              >  8:634464/1‑151 (MQ=14)
                                                                       aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCCCAAACGCGAACAGCAACCGGCTCATCCGGAGCAAGAAGACCAGGTTCATACGCCCAAagcagc                                                                            >  8:1373510/1‑151 (MQ=17)
                                                                          aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGATAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCGACGCTGCGGt                                                                         >  1:234424/1‑151 (MQ=14)
                                                                            cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAAACGGCTAATGAGGTTCCAGATGCAAAGATTGATCCTCGAAAAGCTGCAGTCg                                                                       >  2:61421/1‑151 (MQ=14)
                                                                             aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAAAGCGGAGCCAGAAGAACAGGTTCATCCGCGCAAAGCGGCCGtgg                                                                       >  6:734184/1‑148 (MQ=14)
                                                                             aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCGAGAAAACGGGAACAGCAGCAGGCTAATGCGGAGCCAGAAGAACAGGATCAGCCGAGAAAAGATGCCGtgg                                                                       >  3:1610306/1‑148 (MQ=14)
                                                                              aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCAAAAGCCAAAAAACCCGAACAGCAACAGGATAAAAACGAGCAATAAAAACAATATCATCCGAGCAAATCTGCAGTGGa                                                                      >  6:1462432/1‑150 (MQ=2)
                                                                                  gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGGGAACAGCAAACGGCTAAACCGGAGCAAGAAGAACAGGTTGATCAGCGCAAATCTGCCGTAGAAGCgc                                                                 >  6:378468/1‑150 (MQ=17)
                                                                                   cTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCTAGAAAACCGGAACAGCAACAGGCTAATGCGGAGCAAGAAGTACATGTTGAAACGCGCAAAGCTGcagaagcagatgc                                                                >  5:1551440/1‑139 (MQ=14)
                                                                                    tAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCa                                                                                                                            <  3:1251288/90‑1 (MQ=16)
                                                                                    tAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCa                                                                                                                            >  2:1257970/1‑90 (MQ=16)
                                                                                    tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCt                                                               >  1:723852/1‑151 (MQ=255)
                                                                                       acccGACCCAGCACCCCAGGGTGATCCTCGCAAACCCGCCGTGGAAGCCGCTATGGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt                                                            <  7:1055692/149‑1 (MQ=14)
                                                                                         ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCAGCAAACGCGAACAGCAAAAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCGCAAAGCTCCAGTAGAAGAGCCTATTGc                                                          >  4:1596107/1‑151 (MQ=14)
                                                                                          cGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGcc                                                         >  8:1347541/1‑150 (MQ=255)
                                                                                          cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCAGCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGc                                                          >  3:435012/1‑150 (MQ=14)
                                                                                          cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGGCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGCAGCGGCTATTGcc                                                         >  6:317863/1‑150 (MQ=255)
                                                                                          cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGcc                                                         >  6:1201542/1‑150 (MQ=11)
                                                                                             accAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAACCAGGAACAGCAACAGGCTAATCCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCCGTTGCCGAGGCGATTGccccc                                                      >  8:885034/2‑147 (MQ=14)
                                                                                                agcaaccgttgctgATCCACGTAAAACTGCCGTTGAAGCAGCTATAGCCCGCGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTAATGACGAGCCAGAAGAACAGGTTGATCCTCGCAAAGCGGCCGTCCAAGAAGCAAATGCACGAGcc                                                   >  6:1032863/14‑151 (MQ=14)
                                                                                                aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGACGCGGCTATTGCCCGCGcc                                                   >  3:912457/1‑151 (MQ=255)
                                                                                                aGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTAATCCCCGGGCCAAAGCTCGCAACCGCGCTCACCAGCAGCCTAATGCGGAGCCAGCTGAACAGTGAGAAACGCGCACAGCGGCGGTCGCAGCGGcggcggggcggggc                                                   >  8:952805/1‑138 (MQ=2)
                                                                                                  aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAc                                                                                                                                      <  5:1540256/66‑1 (MQ=38)
                                                                                                   acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGCTCCGCGCACAGCGCCCGTGGCAGCGGCTATTGCCCgcgcgca                                                 >  7:485003/1‑147 (MQ=14)
                                                                                                   acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCACAGCTGCAGTGGCAGCGGCTATTGCACgcgcacac                                                >  2:404091/1‑147 (MQ=14)
                                                                                                   acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTTGAAGCGGCTATTGCCCGCGCCacc                                                >  6:105225/1‑149 (MQ=255)
                                                                                                    caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCCGAGCCAGAAGAACAGGTTGCTCCGCGGAAAGCTGCAGTGGACGCGGCTATTGCCCGCGCCaacg                                               >  3:629304/1‑149 (MQ=17)
                                                                                                     aacaGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCGAAGGc                                              >  4:126195/1‑151 (MQ=14)
                                                                                                      acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAACGCTGCCGTCGACGCGGCTATTGCACGCGCCAACGcc                                             >  1:65505/1‑150 (MQ=255)
                                                                                                      acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGcc                                             >  7:559245/1‑150 (MQ=255)
                                                                                                      acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGAAAACGGGAACAGCAACCGGCTAATGCGGAGCAAGAAGAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCGGCTATTGCACGCGCGaacgac                                             >  2:76741/1‑147 (MQ=17)
                                                                                                       caGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCACGAGCCAAAGCCCGCAAACTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGCTTGATCAGCTCAAAGCTGCAGTCGAAGAGGCTATTGCACGGGCGaacac                                              >  2:993061/1‑146 (MQ=11)
                                                                                                             gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCGAAGGccagaaaac                                      >  6:1610198/1‑143 (MQ=14)
                                                                                                             gATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCGGCAGTAGCCGCGGCTATTGCACGCGCGCAAGCACGCaaac                                      >  6:1290113/1‑149 (MQ=14)
                                                                                                              aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCt                                     >  7:254079/1‑151 (MQ=255)
                                                                                                              aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAACGCCCGCAAGcg                                     >  3:470319/1‑150 (MQ=255)
                                                                                                              aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGCCGCGGCTATTGCCCGCGCGCAGGCACGCAAGcg                                     >  4:204958/1‑150 (MQ=14)
                                                                                                               tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCaagaaaactc                                    >  1:1114523/1‑142 (MQ=17)
                                                                                                               cccgcgcccccccgccgTCGAAGCCGCTATTGCTCTTTCAAAAGATCGCAATCGGGAACAGCAATAGTCTAATTCGGAGACAGAATAACAGGTCGATCCGCTTAACTCTTCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTg                                    <  2:746856/140‑1 (MQ=2)
                                                                                                                 cgcgCAACCCCGCCGGCGAAGCCGCTATTGCCCGAGCCAAATCTCCCAAACCCGAACAGCAACCCGCTAATCCGGAGCGAGACGACCAGGGAGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGa                                  <  5:774872/151‑1 (MQ=17)
                                                                                                                  gcgaAAACCCGCCCTCGAAGCCGCTATTGCCCGAGCCAACTCTCGCAATCAGCAACCGCATCTGGCTAATGCGGACCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGaa                                 <  5:533716/151‑1 (MQ=11)
                                                                                                                    gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                >  7:827602/1‑150 (MQ=255)
                                                                                                                      aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaa                                                                                                      <  2:1030220/78‑1 (MQ=255)
                                                                                                                       cccccgccgTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGACCAGCACCCCTCTAATGCGGAGACAGAAGATCAGCCGGCTCCTCTCAACCCCTCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa                            <  5:1101086/148‑1 (MQ=14)
                                                                                                                       aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGACGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACatc                             >  6:527515/1‑148 (MQ=255)
                                                                                                                        aGCCGCCGTCGAAGCCTCTATTTCTCTTGCCAAAGCGCTCAAGCTGGAACATCAACATGCTAATGCGGATCCAGAAGAACATGTTGATCCGCTGAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCa                                             <  1:756843/133‑1 (MQ=255)
                                                                                                                             ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCa                                                                                   <  7:1183590/90‑1 (MQ=255)
                                                                                                                             ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc                      >  5:51403/1‑151 (MQ=255)
                                                                                                                              cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt                     >  7:1359933/1‑151 (MQ=255)
                                                                                                                               gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCAAAAGCACGCAAGCGGGAACAGCAACAGGCt                     >  1:1049905/1‑150 (MQ=255)
                                                                                                                                ccgccgcccctccgccccGCGCCAAAGCCCGCAACCGGGAACAGCATCCGGCCACTGCCGAGCCATACCAACAGCTTGTGGGGAGGATAGCTGCGCTCTATGCGGCTATTCCAGGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTaa                   <  8:548213/136‑1 (MQ=9)
                                                                                                                                  gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg                 >  1:1040865/1‑151 (MQ=255)
                                                                                                                                   aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                >  2:277757/1‑151 (MQ=255)
                                                                                                                                   aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAACGCACGCAAGCTCGAACAGCAACAGGCTAATGc                >  4:341024/1‑151 (MQ=255)
                                                                                                                                   aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGTAACAGCAACAGGCTAATGc                >  1:894368/1‑151 (MQ=255)
                                                                                                                                     gCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAACGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCgg              >  1:1617347/1‑151 (MQ=255)
                                                                                                                                       cGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAGGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGt             >  4:1111238/1‑150 (MQ=255)
                                                                                                                                        gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGAGGTAc           >  1:1466248/1‑151 (MQ=255)
                                                                                                                                         cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTAcc          >  5:899742/1‑151 (MQ=255)
                                                                                                                                         cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCCCGCAAGCTCGCCCAGCAACAGCCTAAAGAGGTAc           >  2:111522/1‑150 (MQ=21)
                                                                                                                                          tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc          >  7:1101759/1‑150 (MQ=255)
                                                                                                                                            ttGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGACGCGGCTATTGCACGCGCGAACGCCCGCAAGCTGGACCAGCAGCAGGCTGATGCGGtggc          >  2:1421489/1‑145 (MQ=21)
                                                                                                                                             tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTGGAACAGCACAAGGCTAATgacgaacaaga       >  2:1567432/1‑140 (MQ=17)
                                                                                                                                                ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCGGTAGCagaagac   >  1:484982/1‑150 (MQ=255)
                                                                                                                                                 cGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGGTAATGAGGAAGCAGAAGAAc  >  6:240441/1‑151 (MQ=255)
                                                                                                                                                  gAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc  >  5:985886/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708754‑1709049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑