Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,451,280 C→T P75S (CCG→TCG)  ytfR → putative sugar ABC transporter ATPase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,451,2800CT96.4% 1275.1 / 23.1 385P75S (CCG→TCG) ytfRputative sugar ABC transporter ATPase
Reads supporting (aligned to +/- strand):  ref base C (9/5);  new base T (169/201);  total (179/206)
Fisher's exact test for biased strand distribution p-value = 1.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 386 total aligned reads displayed.

TAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGAA  >  NC_000913/4451131‑4451426
                                                                                                                                                     |                                                                                                                                                  
 aGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCg                                                                                                                                                  <  1:103570/151‑1 (MQ=255)
  gACAACGTTGATTTCAGCCTGCGCCGGGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATAAAAGCATTTACTGGTGTATAACACTACGATCGCGGCACCATCTGGCTCGAAGGCCACGCTAACTCATCg                                                                                                                                                  >  5:506204/1‑150 (MQ=255)
   aCAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGaa                                                                                                                                                <  1:415818/151‑1 (MQ=255)
    cAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGaa                                                                                                                                                >  4:1333529/1‑150 (MQ=255)
     aaCGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGaaa                                                                                                                                               >  7:748448/1‑150 (MQ=255)
        gTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGaataat                                                                                                                                            >  3:1008866/1‑150 (MQ=255)
           gATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCg                                                                                                                                        <  6:1368509/151‑1 (MQ=255)
              ttCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGccc                                                                                                                                     >  7:1314015/1‑151 (MQ=255)
                   ccTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACACCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCAcgcg                                                                                                                                <  8:573401/151‑1 (MQ=255)
                        gcCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGcaac                                                                                                                            >  8:1325761/1‑150 (MQ=255)
                          cGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCaacaac                                                                                                                         >  5:1274412/1‑151 (MQ=255)
                           gTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACt                                                                                                                        <  4:81048/151‑1 (MQ=255)
                             ggCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTc                                                                                                                       <  8:152867/150‑1 (MQ=255)
                             ggCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCg                                                                                                                      >  6:1663141/1‑151 (MQ=255)
                              gCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCgg                                                                                                                     <  8:499650/151‑1 (MQ=255)
                                   aTCATGGCGCTGCTCGTTGAAAACGGGGCTGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTg                                                                                                                <  1:1667933/151‑1 (MQ=255)
                                   aTCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTg                                                                                                                >  7:1131619/1‑151 (MQ=255)
                                     cATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGc                                                                                                              <  5:1342221/151‑1 (MQ=255)
                                       tGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCAc                                                                                                            >  7:158620/1‑151 (MQ=255)
                                        ggCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCAcc                                                                                                           >  7:1257008/1‑151 (MQ=255)
                                        ggCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCAc                                                                                                            <  8:283652/150‑1 (MQ=255)
                                           gctgctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTc                                                                                                        >  8:903139/1‑151 (MQ=255)
                                           gctgctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTc                                                                                                        >  1:759977/1‑151 (MQ=255)
                                            ctgctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCt                                                                                                       >  3:157479/1‑151 (MQ=255)
                                              gctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTTGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTTGCACCGTCt                                                                                                       <  1:572367/149‑1 (MQ=255)
                                              gctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTAt                                                                                                     >  6:1256875/1‑151 (MQ=255)
                                                tCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCCATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATc                                                                                                    >  4:1014483/1‑150 (MQ=255)
                                                  ggTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAgg                                                                                                 <  2:39937/151‑1 (MQ=255)
                                                    tGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGa                                                                                                >  2:778477/1‑150 (MQ=255)
                                                      aaaaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGt                                                                                             <  3:446706/151‑1 (MQ=255)
                                                      aaaaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGt                                                                                             >  5:1160227/1‑151 (MQ=255)
                                                       aaaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTc                                                                                            >  6:736153/1‑151 (MQ=255)
                                                        aaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCa                                                                                           <  3:1142795/151‑1 (MQ=255)
                                                         aCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCaa                                                                                          <  6:836324/151‑1 (MQ=255)
                                                         aCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCa                                                                                           >  6:1064995/1‑150 (MQ=255)
                                                          cGGGGCGGGAAAATCAACCCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGCCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTCCCACCGTCTATCAGGAAGTCAAc                                                                                         >  4:1304044/1‑151 (MQ=255)
                                                            gggCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCt                                                                                       >  4:228787/1‑151 (MQ=255)
                                                             ggCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTg                                                                                      <  7:810602/151‑1 (MQ=255)
                                                               cGGGAACATCAACGCTAATCAAATCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCt                                                                                    <  7:309780/151‑1 (MQ=255)
                                                                gggAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTa                                                                                   <  5:963919/151‑1 (MQ=255)
                                                                gggAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTa                                                                                   <  6:131574/151‑1 (MQ=255)
                                                                   aaaaTCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTAccc                                                                                >  4:932328/1‑151 (MQ=255)
                                                                     aaTCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCaa                                                                              <  5:1671455/151‑1 (MQ=255)
                                                                      aTCAACGCTACTCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAACTACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAat                                                                             <  2:901671/151‑1 (MQ=255)
                                                                      aTCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAat                                                                             <  6:57253/151‑1 (MQ=255)
                                                                        cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat                                                                           >  5:689224/1‑151 (MQ=255)
                                                                        cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat                                                                           <  8:1098774/151‑1 (MQ=255)
                                                                        cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat                                                                           <  8:643809/151‑1 (MQ=255)
                                                                        cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat                                                                           <  3:1047637/151‑1 (MQ=255)
                                                                           cGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATgtc                                                                        <  1:939646/151‑1 (MQ=255)
                                                                               aaTCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATgtcggtc                                                                    <  1:14092/151‑1 (MQ=255)
                                                                                  cAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCt                                                                 <  2:923124/151‑1 (MQ=255)
                                                                                   aaaGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTg                                                                <  7:233341/151‑1 (MQ=255)
                                                                                   aaaGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTCGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACCCGCAACAACTCGCCATTGCCACCCTCAATCAGCAAGTCAACCTCCTACCCAAAATgtaggtacaa                                                                 >  6:237602/1‑146 (MQ=255)
                                                                                       cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCTTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa                                                            <  5:1063906/151‑1 (MQ=255)
                                                                                       cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa                                                            <  3:559841/151‑1 (MQ=255)
                                                                                       cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa                                                            <  2:957871/151‑1 (MQ=255)
                                                                                       cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa                                                            <  8:1659842/151‑1 (MQ=255)
                                                                                        aTTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAAt                                                           >  5:610118/1‑151 (MQ=255)
                                                                                          tAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCt                                                         >  4:339254/1‑151 (MQ=255)
                                                                                          tAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCt                                                         >  1:208420/1‑151 (MQ=255)
                                                                                           aaCTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCt                                                         <  3:512770/150‑1 (MQ=255)
                                                                                           aaCTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAAACTGCTACCCAATATGTCGGTCGCTGATAATCt                                                         >  1:117648/1‑150 (MQ=255)
                                                                                            aCTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTAt                                                       >  4:504298/1‑151 (MQ=255)
                                                                                             cTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTAtt                                                      >  1:1506047/1‑151 (MQ=255)
                                                                                               ggTCTATACCACGCCGATCGCCGCACCATCTCGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGGCAACCTGCTACCCAATATGGCGGTCGCGGATAATCTATTta                                                    <  3:282204/151‑1 (MQ=255)
                                                                                                gtgtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtat                                                   <  8:1231106/151‑1 (MQ=255)
                                                                                                gtgtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtat                                                   <  2:222266/151‑1 (MQ=255)
                                                                                                 tgtATACCACGCCGATCGCGGCCCCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCCACACCTCGGCATGGGCACCGTCTATCAGGAAGTCCCCCTGCTACCCCCAATGTCGGGCGCGGATAAGCTATTtatg                                                  >  6:971021/1‑150 (MQ=255)
                                                                                                 tgtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtat                                                   >  8:541348/1‑150 (MQ=255)
                                                                                                  gtATACCACGCCGATCGCGGGACCATCTGGCTGGAAGGCCAGGCTATATCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtata                                                  <  5:819629/150‑1 (MQ=255)
                                                                                                  gtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtata                                                  <  2:492644/150‑1 (MQ=255)
                                                                                                    ataCCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGc                                               >  7:916788/1‑151 (MQ=255)
                                                                                                      aCCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGcc                                              <  4:159994/150‑1 (MQ=255)
                                                                                                          cGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCCCGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGa                                          >  8:217070/1‑150 (MQ=255)
                                                                                                             cGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAAccc                                      >  7:641782/1‑151 (MQ=255)
                                                                                                             cGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAAccc                                      <  5:371090/151‑1 (MQ=255)
                                                                                                               aTCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaa                                    <  7:40721/151‑1 (MQ=255)
                                                                                                               aTCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaa                                    <  3:1210754/151‑1 (MQ=255)
                                                                                                                  gcgGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACg                                 <  1:801050/151‑1 (MQ=255)
                                                                                                                   cgGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGc                                >  5:766506/1‑151 (MQ=255)
                                                                                                                       aCCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCg                            <  2:141326/151‑1 (MQ=255)
                                                                                                                        ccATCTGGCTGGAAGGCCAGGCTATCTCACCGATAAATACCGCCCACGCGCAACACCTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTTTAGGCCGGGAACCCACACGCTTCgg                           >  4:1070248/1‑151 (MQ=255)
                                                                                                                          aTCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaaa                                   <  7:1469109/141‑1 (MQ=255)
                                                                                                                          aTCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaaa                                   >  4:1475352/1‑141 (MQ=255)
                                                                                                                              ggctggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGcc                         <  4:142856/147‑1 (MQ=255)
                                                                                                                               gctgtAAGGGCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACGGTCTATCAGGAAGTGAACCTGCTACCCAATTTGTCGGTCGCTGATAATCTATTTATAGGCGGCGAACCCAAACGCTTCGGCCTTCTa                    <  4:751914/151‑1 (MQ=255)
                                                                                                                                gtggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAc                   <  4:1126948/150‑1 (MQ=255)
                                                                                                                                 tggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAGTATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcg                  >  2:297141/1‑151 (MQ=255)
                                                                                                                                  ggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcgc                 >  5:1458766/1‑151 (MQ=255)
                                                                                                                                     aGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcgccgc              <  2:1499091/151‑1 (MQ=255)
                                                                                                                                      ggCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcgccgc              >  1:897904/1‑150 (MQ=255)
                                                                                                                                        ccAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCaaa           <  7:514731/151‑1 (MQ=255)
                                                                                                                                         cAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCaa            >  3:1347611/1‑149 (MQ=255)
                                                                                                                                           ggCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAagag        <  1:656414/151‑1 (MQ=255)
                                                                                                                                           ggCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAagag        <  3:694667/151‑1 (MQ=255)
                                                                                                                                            gCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAgaga       <  2:1092299/151‑1 (MQ=255)
                                                                                                                                             cTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGACAt      >  2:1262692/1‑151 (MQ=255)
                                                                                                                                              tATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATg     >  5:446196/1‑151 (MQ=255)
                                                                                                                                                  tcATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCCAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGaa  >  1:1115218/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
TAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGAA  >  NC_000913/4451131‑4451426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: