Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,781,0320TG23.2% 638.9 / 58.5 321intergenic (+15/‑183)lldD/trmLL‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base T (46/183);  new base G (69/0);  total (136/185)
Fisher's exact test for biased strand distribution p-value = 5.26e-37
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 330 total aligned reads displayed.

AAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTT  >  NC_000913/3780883‑3781182
                                                                                                                                                     |                                                                                                                                                       
aaaGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTc                                                                                                                                                        >  7:115308/1‑151 (MQ=255)
aaaGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTc                                                                                                                                                        <  2:323112/151‑1 (MQ=255)
     gaTGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCt                                                                                                                                                   <  8:1152202/151‑1 (MQ=255)
       tGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCgcccccgcccccga                                                                                                                                                  >  6:1613834/1‑148 (MQ=255)
         aaaGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAcc                                                                                                                                               >  4:440619/1‑151 (MQ=255)
          aaGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCccccccccccccaacc                                                                                                                                              >  5:1161973/1‑145 (MQ=255)
            gTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCctc                                                                                                                                            <  5:1268070/151‑1 (MQ=255)
             tGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCGAAcccgcg                                                                                                                                           >  6:513117/1‑148 (MQ=255)
                  aTGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACACACTCCCTc                                                                                                                                      >  2:1205597/1‑151 (MQ=255)
                  aTGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAacccagacccg                                                                                                                                      >  4:1020709/1‑143 (MQ=255)
                   tGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCCAAACCACTCCCTc                                                                                                                                      >  6:207698/1‑150 (MQ=255)
                    gACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGGACCCGAACCCACGcccgc                                                                                                                                      >  8:648582/1‑147 (MQ=255)
                       gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGGGCCCCCACCCCCGAACCCGCTCCCGCAgggg                                                                                                                                 >  6:772262/1‑150 (MQ=255)
                       gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGga                                                                                                                                 <  7:439820/151‑1 (MQ=255)
                       gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCTCCCCCAAACCCTCACCCGCAcggc                                                                                                                                 >  6:1041212/1‑150 (MQ=255)
                        gtGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGTTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGgag                                                                                                                                <  1:1653268/150‑1 (MQ=255)
                          gACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGgaga                                                                                                                               <  4:1254092/150‑1 (MQ=255)
                          gACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGgag                                                                                                                                <  8:1377083/149‑1 (MQ=255)
                            cTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGGACCCTAACCCTCTCCCGCCGGGAGCggg                                                                                                                            >  6:660582/1‑151 (MQ=255)
                              ggCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa                                                                                                                          <  2:1179470/151‑1 (MQ=255)
                                cgcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAcc                                                                                                                        <  5:712475/151‑1 (MQ=255)
                                cgcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAcc                                                                                                                        <  3:186487/151‑1 (MQ=255)
                                 gcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTTCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCAACCCAACCCTCGACATGACGGAGACGGGACCg                                                                                                                       >  1:1354099/1‑151 (MQ=255)
                                  cgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGt                                                                                                                      <  2:787128/151‑1 (MQ=255)
                                  cgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCGAACCCACTCCCGCAGGGCGACGGGTCCgg                                                                                                                      >  3:1447468/1‑150 (MQ=255)
                                   gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                                                                                     <  3:378853/151‑1 (MQ=255)
                                    aaaTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTGGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGCCCGttg                                                                                                                    >  7:120670/1‑150 (MQ=255)
                                      aTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCgg                                                                                                                  <  4:532392/151‑1 (MQ=255)
                                        cGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCCAAACCACGACCACAGGGGGAggggggccgtggggg                                                                                                                >  6:1447864/1‑140 (MQ=255)
                                          aTCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAAGGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCt                                                                                                              <  1:704415/151‑1 (MQ=255)
                                            cAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtg                                                                                                             <  2:847768/150‑1 (MQ=255)
                                            cAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCCAACCCACCACCCCAGGGGGCGGGGGCCCTTAGGCGCggt                                                                                                            >  1:1590370/1‑151 (MQ=255)
                                              gCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCGAAACCTCTCCCGCAGGGAGAGGGGCCCGTTCGgcgcgggat                                                                                                          >  1:205217/1‑146 (MQ=255)
                                               cGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAACCTCGCCCGCAGGGGGCCGGGACCGGTCGGCGCggtatt                                                                                                         >  3:210828/1‑150 (MQ=255)
                                               cGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGGTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatg                                                                                                         <  4:194820/151‑1 (MQ=255)
                                                gAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgt                                                                                                        <  6:302762/151‑1 (MQ=255)
                                                gAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgt                                                                                                        <  3:730494/151‑1 (MQ=255)
                                                gAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCGCAGGGAGAGGGGACCGTTAGGCGCggtatgt                                                                                                        >  7:845213/1‑151 (MQ=255)
                                                 aaaTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgta                                                                                                       <  7:400971/151‑1 (MQ=255)
                                                 aaaTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCTATCCCACAGGGAGAGGGGACCGGTAGGCGCtgtatgt                                                                                                        >  7:914716/1‑150 (MQ=255)
                                                  aaTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACCCCCGAAACCTCTCCCGCACGGAGCGGGGCCCCGTCGGCGCGGTATGTAc                                                                                                      >  5:1625744/1‑151 (MQ=255)
                                                   aTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAAACCTCTCCCTCAGGGAGACGGGCCCGGTCGGCGCTGTATGTACt                                                                                                     >  2:569854/1‑151 (MQ=255)
                                                         cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCa                                                                                               <  8:1470583/151‑1 (MQ=255)
                                                             aTTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCGAACCCACACCCGCAGGGACAGCGGGCCGGTCGGGGCGGGATGTACGcccgcccgcg                                                                                           >  6:415057/1‑144 (MQ=255)
                                                             aTTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCTAACCCGCTCCCGCCCGGAGAGGGGCCCGGTGGGCGCTGGTTGTACGACCTCaagct                                                                                           >  4:1512680/1‑147 (MQ=255)
                                                               tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCAAACCCCCACCCTCCCGGAGAGGGGGCCGGTCGGGGCCGTATGTTCTCCCGCAcaccgg                                                                                         >  2:450908/1‑146 (MQ=255)
                                                               tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTg                                                                                          <  1:1202995/150‑1 (MQ=255)
                                                               tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTg                                                                                          <  1:1403544/150‑1 (MQ=255)
                                                               tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGGACTCCCTCCCTCTgc                                                                                         >  3:953127/1‑150 (MQ=255)
                                                               tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCAATACCACACGGAGAGGGGCCCCTTGGGCGCGGTATGTAATCCCTCACACTg                                                                                          >  2:1572819/1‑150 (MQ=255)
                                                                cGCTGGTGCAGGGGCTGTGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGa                                                                                         <  1:339461/150‑1 (MQ=255)
                                                                cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGGATGTACTCCCTCACACTGa                                                                                         >  3:1237533/1‑150 (MQ=255)
                                                                    ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc                                                                                      <  8:299880/149‑1 (MQ=255)
                                                                    ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc                                                                                      <  4:260234/149‑1 (MQ=255)
                                                                       gCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGaca                                                                                  <  2:512257/150‑1 (MQ=255)
                                                                        cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGGAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACCCCCTCACTCTGAAACGACAcc                                                                                <  8:157623/151‑1 (MQ=255)
                                                                        cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAAAGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTGTGCAACGACAcc                                                                                >  4:1390613/1‑151 (MQ=255)
                                                                          ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGc                                                                              <  1:895938/151‑1 (MQ=255)
                                                                             gcggggTAAAGAGTTGCCTGCGGCACTGGCGCCCATGGCGAAAGGGAAGGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAct                                                                           <  4:652735/148‑1 (MQ=255)
                                                                                gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActc                                                                          <  6:1390735/149‑1 (MQ=255)
                                                                                gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGAGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGTGGACCGTTCGGCGCTGTATGTACTACCTCACTCTGAAACGACACCGCActc                                                                          <  1:600382/149‑1 (MQ=255)
                                                                                    aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttttt                                                                    <  1:805665/151‑1 (MQ=255)
                                                                                     aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttttttt                                                                   <  3:1110652/151‑1 (MQ=255)
                                                                                      agagTTGCCTGCGGCACTGGCCCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCTCTACCTCAGGGGGAGGGGACCGTTCGGCGCTGTATGTTCTCCCGCACTCTGCAACGCCACCGCCCTCtttttttt                                                                  >  1:1020609/1‑150 (MQ=255)
                                                                                           tGCCGGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTCTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTccc                                                              <  7:614998/150‑1 (MQ=255)
                                                                                            gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCTAACCCACTCCCGCACGGCGCGGGGGCCCGTAGGGGGGGTATGTTCTCCCTCACTCTGAAACGCCACCCCCCGCGTTTTTTTTACCTc                                                            >  1:796041/1‑151 (MQ=255)
                                                                                            gCCTGCGGCACTGGCGCCCCTGGCGAAAGGGAATGCGGCATAGTCGCTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTc                                                            <  6:836803/151‑1 (MQ=255)
                                                                                             ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCg                                                           <  1:150674/151‑1 (MQ=255)
                                                                                             ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCg                                                           <  2:1512003/151‑1 (MQ=255)
                                                                                                gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCGAAACCTCTCCCGCACGGCGCGGGGGCCGGTGGGCGGGGGATGTACTCCCCCCCGCTGAAACCACCCCCGCCGCGTTTTTTATccccacccc                                                        >  3:1503967/1‑145 (MQ=255)
                                                                                                   gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTc                                                     <  3:1008089/151‑1 (MQ=255)
                                                                                                   gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTc                                                     <  5:1679213/151‑1 (MQ=255)
                                                                                                    cACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCATTCTTTTTTTCTCCCTCGCCCCTcc                                                    <  5:314791/151‑1 (MQ=255)
                                                                                                     aCTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCg                                                   <  2:1341261/151‑1 (MQ=255)
                                                                                                        ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg                                                 <  6:1288484/150‑1 (MQ=255)
                                                                                                        ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgggg                                                <  5:44152/151‑1 (MQ=255)
                                                                                                         gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga                                               <  3:623572/151‑1 (MQ=255)
                                                                                                            cgcATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag                                              <  4:876515/147‑1 (MQ=255)
                                                                                                             ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑gg                                          <  3:528118/151‑1 (MQ=255)
                                                                                                             ccATGGCGAAAGGGAATGCGGCATAGTCGGTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑gg                                          <  5:594548/151‑1 (MQ=255)
                                                                                                              cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑ggg                                         <  4:923382/151‑1 (MQ=255)
                                                                                                              cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCAAAACCACACCCACACGGGTAGGGGGCCCTTAGGCGCTGTTTTTTAGCCCGCCATCTGAAACCCCACCGCCCGCGTTTTTTAACCCACGCCCCACCcggggggcgg                                          >  1:526990/1‑145 (MQ=255)
                                                                                                                 ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGcc                                       <  4:1600972/150‑1 (MQ=255)
                                                                                                                 ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCg                                      <  6:355480/151‑1 (MQ=255)
                                                                                                                  gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCgg                                     <  7:1273149/151‑1 (MQ=255)
                                                                                                                  gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCgg                                     <  2:1151486/151‑1 (MQ=255)
                                                                                                                   cGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCggg                                    <  7:145420/151‑1 (MQ=255)
                                                                                                                    gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCgggg                                   <  5:829671/151‑1 (MQ=255)
                                                                                                                    gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCAAACCCTCTACCCCATGGCGCGGGGACCGTTGGGCGCTGTATGTACGCCCCACCACGGAAACCCCACCGCCCGCGGTTTTTATACCTCGCCCCTCCGGCGGGACGGGCCggg                                    >  6:1007881/1‑151 (MQ=255)
                                                                                                                         ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAgg                              <  1:116282/151‑1 (MQ=255)
                                                                                                                         ggAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCAATCCCGCAGGGGGAGGGGACCGGTAGGCGCAGTATGTAATGCCTCACTATGAAACGACACCGCACACGTTTTTTATCCCACGCCCCACCCGGGAGC‑GGGCCCGGGGGAgg                              >  6:1092699/1‑151 (MQ=255)
                                                                                                                         ggAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCTAACCCTCACGGACAGGGGACCGTTCCGCGCTGTATGTACTACCACACACTGAAAAACCACCCCACACATTTTTTATACCACCCCCCAACGGGGAGA‑GGGCCCGGGTGAgg                              >  8:39584/1‑151 (MQ=255)
                                                                                                                          gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAggg                             <  8:869838/151‑1 (MQ=255)
                                                                                                                           aaggCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAgggg                            <  8:547589/148‑1 (MQ=255)
                                                                                                                            aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGACGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAgggg                            >  1:129943/1‑150 (MQ=255)
                                                                                                                               cgtcATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAGGGGaaaa                        <  8:1121423/148‑1 (MQ=255)
                                                                                                                                   atcggcGTTGGCCCCCCCACACCCTAACCCTCTCCCTCAGGGTGTGGGGACCGTGCGGCGCTGTATGTACACCCTCACTCTCAACCCACACCGCACTCTTTTTTTCACCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGCGGGCAAAAGGcc                    <  8:1200673/146‑1 (MQ=255)
                                                                                                                                          tttGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGC‑GGGCCGGGGTGAGGGGAAAAGGCCGCACTGc             >  8:43894/1‑151 (MQ=255)
                                                                                                                                                     tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt  >  5:275827/1‑151 (MQ=255)
                                                                                                                                                     tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt  >  8:167038/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
AAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGA‑GGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTT  >  NC_000913/3780883‑3781182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑