BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,308,745	0	T	G	25.4%	684.0 / 67.6	357	intergenic (‑100/‑43)	clsA/yciY	cardiolipin synthase 1/uncharacterized protein
Reads supporting (aligned to +/- strand): ref base T (182/83); new base G (1/89); total (183/174)
Fisher's exact test for biased strand distribution p-value = 6.37e-34
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 387 total aligned reads displayed.

CCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATCCAC  >  NC_000913/1308595‑1308895

   gTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCgggggtggg                                                                                                                                                     <  2:1731025/151‑1 (MQ=255)

       cccAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGta                                                                                                                                                 <  7:1354594/151‑1 (MQ=255)

        ccAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGtat                                                                                                                                                <  5:1017683/151‑1 (MQ=255)

           gAATGGCCAACCAACTCACCAACGTATAAACCGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTCGTCAGCCTCGGGCGTGGCGGTATaa                                                                                                                                              >  8:879876/1‑150 (MQ=255)

               ggCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTTTTATGAGTTTACGCATATGGATTCATCTGCCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGAcc                                                                                                                                         <  8:689359/151‑1 (MQ=255)

                gCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGCGGGTATAATGAcc                                                                                                                                         >  6:334213/1‑150 (MQ=255)

                  caaccaacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGCCCAtt                                                                                                                                      >  8:1513180/1‑151 (MQ=255)

                  caaccaacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCAtt                                                                                                                                      <  5:923261/151‑1 (MQ=255)

                      caacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGt                                                                                                                                  <  7:700622/151‑1 (MQ=255)

                          tCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTTTAATGACCATTCTGTTAtt                                                                                                                              >  1:107273/1‑151 (MQ=255)

                           cACCAACTTATAAACGGTTGTCATAGAATAGAAATCCTTTTGAAAGCGCATTGTTATGATTTTACGCATATGTATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTAtt                                                                                                                              <  7:650434/150‑1 (MQ=255)

                           cACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTAt                                                                                                                               <  3:187443/149‑1 (MQ=255)

                                aCGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGGCAGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATag                                                                                                                        <  1:621509/151‑1 (MQ=255)

                                      aaaCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGCCAAATAAAAACGCGCGAAAAGCACTGCTCAGCGTCGGGGGTGGGCGTATAATGACCATTCTGTTATTGCATAGagtagt                                                                                                                  >  6:404420/1‑151 (MQ=255)

                                      aaaCGGTTGTCATACATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGAATATGGATTCATCTGGCAAATAAAAACGCGGGAACAGCACTGGGCAGCGTCGGGGGGGGGCGTATAATGACCATTCTGTTATTGCATACagtag                                                                                                                   <  7:1284571/150‑1 (MQ=255)

                                       aaCGTTTGTCATAGATTAGAAATCCTTTTGAAATCGCTTTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGtt                                                                                                                 <  4:1121518/151‑1 (MQ=255)

                                         cGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTa                                                                                                                >  4:550050/1‑150 (MQ=255)

                                          tgTTCTCATAGATTAGAAATCCTTTTGTAAGCTCTTTGTTATGATTTTACGCATATTTATTAATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTaa                                                                                                               <  6:825858/149‑1 (MQ=255)

                                           gTTTTCATAGATTAGAAATCGTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCCCTGGGCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACa                                                                                                             <  2:1153008/151‑1 (MQ=255)

                                              gTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATg                                                                                                           >  3:590088/1‑150 (MQ=255)

                                              gTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATg                                                                                                           >  1:367062/1‑150 (MQ=255)

                                                cATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGa                                                                                                          >  3:1011502/1‑149 (MQ=255)

                                                   aGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAACACGCGGGAAACGCACTGGTCAGCGGCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCg                                                                                                      <  6:543608/150‑1 (MQ=255)

                                                     aTTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCgg                                                                                                     >  2:590964/1‑149 (MQ=255)

                                                     aTTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCgg                                                                                                     >  4:1490382/1‑149 (MQ=255)

                                                      ttAGAAATGGTTTTGATTGCGCTTTGTTATTTGTTTACGCATATGGATTAATCATGAAAATAAAAACTCGGTTTATGCAGTGGTCAGCGGCGGTGGCGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAATCGGAg                                                                                                   <  6:1801539/150‑1 (MQ=255)

                                                       tAGAAATTCTTTTTAAATCTCATTTTTTTGATTTTACTCATATGGATTCATCTTGAAAATAAAAACGCGCGAAAAGCTCTGGTGAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  <  2:1584836/150‑1 (MQ=255)

                                                       tAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  >  5:1121309/1‑150 (MQ=255)

                                                        aGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  >  1:925145/1‑149 (MQ=255)

                                                        aGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGCCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  >  3:809284/1‑149 (MQ=255)

                                                         gAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  >  1:51997/1‑148 (MQ=255)

                                                               cTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAAGATGAAGCGGAGTAGAACGGa                                                                                          >  4:1756288/1‑150 (MQ=255)

                                                               cTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGa                                                                                          >  7:280143/1‑150 (MQ=255)

                                                                ttttGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                                                  >  8:1112677/1‑141 (MQ=255)

                                                                 tttGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAACACGCGGGAACCGCACTGGGCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAg                                                                                        <  3:242644/150‑1 (MQ=255)

                                                                    gAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTggg                                                                                    >  7:1459293/1‑151 (MQ=255)

                                                                      aagccgaTTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAACACGCGGGTACAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgc                                                                                  <  8:570832/145‑1 (MQ=255)

                                                                        tctctttGTTTTTAGTTTACGCTTATGGATTAATCTCGCAAATAAAATCGCGGTAAATGCTCTGGTGTGCGTGGGGTGTGTGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGTAGTAGAACGGAAGTGGGgcg                                                                                 <  8:1813108/145‑1 (MQ=255)

                                                                          gcATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTg                                                                              <  6:1867447/151‑1 (MQ=255)

                                                                              tGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                                          >  5:781750/1‑151 (MQ=255)

                                                                               gTTATTAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                                          <  5:722199/150‑1 (MQ=255)

                                                                                 tATGAGTTTACGCATATGCATTCATCTCGCAAATAAACACCCCGGAAACGCACTGCTCACCGTCGGGGGGGGGCGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCAt                                                                        <  4:1266964/150‑1 (MQ=255)

                                                                                  aTGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGc                                                                      >  3:1204364/1‑151 (MQ=255)

                                                                                  aTGACTTTACGCATATGGATTCATCTGCCAAATAAAACCGCGGGACACGCACTGGGCCGCGGCGGGGGGGGGCGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATg                                                                       <  6:694356/150‑1 (MQ=255)

                                                                                    gattttACGCATCTGGCGTCATCTGCCACATCACCCCGCCGGACCCCCACGGGGCCGCGGCGGGGGGGGGGGTATAAGGACCATTCTGTTATTGCATAGAGTAGGTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAg                                                                    <  7:1595702/148‑1 (MQ=255)

                                                                                     aGTTTAATCATATGGATTCCTCTCGCAAATAACAACGCGGGAAACCCAGTGGTCCGCGTCGGGGGTGGGCGTATAATGACCATTCTGTTACTGCATAGAGTAGTTAGCATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGc                                                                   <  5:964892/151‑1 (MQ=255)

                                                                                      gTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCg                                                                  >  3:948353/1‑151 (MQ=255)

                                                                                      gTTTACGCATATCGATTAATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGCGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACCTAAGTCGCGCCCAGGAGCAAGCAGCg                                                                  >  6:1482292/1‑151 (MQ=255)

                                                                                        ttACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTT‑ACATGAAGCGGAGTAGCACGGAAGTGGGGCGCTGGCGCATGCAGCGTcc                                                               >  3:1639026/1‑150 (MQ=255)

                                                                                        taaCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAACCCCTGGGCAGCGTCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGt                                                                 <  8:137581/148‑1 (MQ=255)

                                                                                          aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTc                                                                >  5:1794989/1‑149 (MQ=255)

                                                                                          aCGCATATGGACTCATCTGCCAAAAAAAACCGCGGGAAACGCCCTGGGCCGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAg                                                              <  3:1331704/151‑1 (MQ=255)

                                                                                             cATATTGATTCATCTTGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           <  2:852146/151‑1 (MQ=255)

                                                                                             cATATGGATTCATCTGGCAAATAAAACCGCGGGAAAAGCACTGGGCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           <  7:525911/151‑1 (MQ=255)

                                                                                             cATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           >  4:872140/1‑151 (MQ=255)

                                                                                             cATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           >  4:710916/1‑151 (MQ=255)

                                                                                              atatGGTTTCATCTGGCAAATAAAAACGCGGGAACAGCACGGGGCAGCGGCGGGGGGGGGGGGATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTa                                                          <  1:179899/151‑1 (MQ=255)

                                                                                               tatGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           >  8:1659395/1‑149 (MQ=255)

                                                                                               tatGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCt                                                           >  4:210256/1‑149 (MQ=255)

                                                                                                  ggATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCg                                                      >  4:1041519/1‑151 (MQ=255)

                                                                                                  ggATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGGGGGGTATAATGCCCATTGTGTTATTGCATAGAGTAGTTAACATGATGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCCGGCTCGCCg                                                      >  7:784566/1‑151 (MQ=255)

                                                                                                    aTTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGAc                                                    >  3:1735710/1‑151 (MQ=255)

                                                                                                     ttgaTCAGGGAAATAAATACGCGGGCAAAGCCCTGGTCACCGGGGGGGGTGGGGGGATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGAc                                                    <  2:534206/147‑1 (MQ=255)

                                                                                                      tCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGt                                                  >  5:1472983/1‑151 (MQ=255)

                                                                                                         tctttcAAATAAAAAGGCGGTAAAAGCAGTGGTCAGCGTCGGGGGCGGGGGTATATTGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGATTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCTGGCTAGCCGACGTaa                                                <  2:1371796/145‑1 (MQ=255)

                                                                                                           tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATc                                             >  8:1045672/1‑151 (MQ=255)

                                                                                                            ggcacagacacaCGCGGGCAACGCACTGGTCCCCGTCGGGGGGGCGCGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATc                                             <  5:582987/139‑1 (MQ=255)

                                                                                                            ggCAAATAAAATCGCGGGAAAAGCTCTGGTCTGCTGCGGGGGTGGGTGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTaa                                                <  2:817304/147‑1 (MQ=255)

                                                                                                              aaaaTCAAAACCCGGCAACAGCCCGGGCCCGCGGCGGGCGGGGGGGAATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATcgcg                                          <  3:107295/150‑1 (MQ=255)

                                                                                                               aatttaaaaGGCGTGAAAAGCCCTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGt                                         <  2:1482008/146‑1 (MQ=255)

                                                                                                                aaTAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGtt                                        >  4:1628348/1‑151 (MQ=255)

                                                                                                                  tAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAACTCGCGTTgg                                      >  8:289528/1‑151 (MQ=255)

                                                                                                                    aaaaCGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCt                                    >  7:1743298/1‑151 (MQ=255)

                                                                                                                      aaCGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTg                                  >  8:1699155/1‑151 (MQ=255)

                                                                                                                       aCGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCTCGTTGGCTTg                                  >  8:1249052/1‑150 (MQ=255)

                                                                                                                        cgcgGGACAACCCCGGGCCAGCGTCGGGGGGGGGCGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAg                                <  4:359175/151‑1 (MQ=255)

                                                                                                                        cgcgGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTg                                  >  5:383246/1‑149 (MQ=255)

                                                                                                                         gcgGTAAAACCTCGGGTCAGCGTCGGGGGGGGGTGAATAATGACAATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTTGGGCTCTGGCTCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAgg                               <  1:1010338/151‑1 (MQ=255)

                                                                                                                           ggcaaacGCACTGGTCAGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTCTTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAgggg                             <  1:433444/148‑1 (MQ=255)

                                                                                                                            ggAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGAATGCAGCGTCAGGCTCGCCGCCGTAAATCGCGTTGGCTTGAGGGGc                            >  5:165659/1‑151 (MQ=255)

                                                                                                                             gAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATTGCGTTGGCTTGAGGGGc                            >  7:1049308/1‑150 (MQ=255)

                                                                                                                             gAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGc                            >  1:127366/1‑150 (MQ=255)

                                                                                                                             gAAAAGCACTGGGCACCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCa                           <  7:402338/151‑1 (MQ=255)

                                                                                                                                acgCACTGGTCCGCGGCGGGGGGGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGACCGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATc                        <  6:1131206/149‑1 (MQ=255)

                                                                                                                                aaGCACGGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATc                        <  3:478199/151‑1 (MQ=255)

                                                                                                                                 accACGGGTCAGCGTCGGGGGGGGGGGTAGAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATcg                       <  1:757207/149‑1 (MQ=255)

                                                                                                                                 aGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATcg                       >  1:1091321/1‑151 (MQ=255)

                                                                                                                                  gCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATcgc                      >  5:224984/1‑151 (MQ=255)

                                                                                                                                  ccactggcacgcggcgGGGGGGGCGTTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGTAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATcgc                      <  3:382663/141‑1 (MQ=255)

                                                                                                                                   cACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATcgcg                     >  2:346410/1‑151 (MQ=255)

                                                                                                                                    aCTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGCGGCAATCgcgc                    >  5:1417440/1‑151 (MQ=255)

                                                                                                                                      tGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGTGCAATCGCGCCg                  >  1:1344252/1‑151 (MQ=255)

                                                                                                                                        gTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGa                 >  2:286628/1‑150 (MQ=255)

                                                                                                                                          cAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGaaa               >  1:1711356/1‑150 (MQ=255)

                                                                                                                                           cgggtggggggtgggggtATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAata             <  6:951238/145‑1 (MQ=255)

                                                                                                                                           aGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACCTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAat              >  4:447617/1‑150 (MQ=255)

                                                                                                                                               gcGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGACCGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCg         <  8:392758/150‑1 (MQ=255)

                                                                                                                                                cGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGt        <  5:1287820/151‑1 (MQ=255)

                                                                                                                                                   gggggggggaTTAATGACCATTCTTTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAAGGTTAGTGGGGCGCTGGCGCATGGAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATc     <  6:1315277/151‑1 (MQ=255)

                                                                                                                                                    ggtgggggtATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATcc    >  3:708612/1‑151 (MQ=255)

CCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATCCAC  >  NC_000913/1308595‑1308895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`