BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,552,191	0	C	A	25.3%	975.0 / 120.7	486	intergenic (+200/+207)	fdnI/yddM	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base C (123/229); new base A (93/26); total (226/260)
Fisher's exact test for biased strand distribution p-value = 1.97e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 493 total aligned reads displayed.

CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATC  >  NC_000913/1552041‑1552341

cATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc                                                                                                                                                        <  7:1374011/151‑1 (MQ=31)

 atatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc                                                                                                                                                        >  6:907956/1‑150 (MQ=31)

 atatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa                                                                                                                                                       <  1:320411/151‑1 (MQ=31)

   atTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAGCACTACAAAACGAATACAGTGCAGTGAACGTGTATGCATGATAAGCGGAGCGGATCATGCAATTTTGCGTTTGTCCTCAGTTTCaa                                                                                                                                                      >  5:1023665/1‑150 (MQ=11)

    ttGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTGGGGCATCAGTTTCAAAt                                                                                                                                                    >  3:179688/1‑151 (MQ=16)

      gTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATgg                                                                                                                                                  <  6:1035729/151‑1 (MQ=33)

        aGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTAATACGGCATGAAAACCCTTCAAAACCAATACAGTGAAGTGAACGTGTAGGCCTGATAAGCGTAGAGCAACAAGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcg                                                                                                                                                >  2:1695946/1‑151 (MQ=11)

         gACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcgg                                                                                                                                               >  1:1536787/1‑150 (MQ=18)

            naCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCGGt                                                                                                                                            >  3:910159/2‑151 (MQ=18)

            aaCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAGAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGt                                                                                                                                            >  5:141990/1‑151 (MQ=18)

              cGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa                                                                                                                                          <  3:1667292/151‑1 (MQ=37)

               gTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa                                                                                                                                         <  7:583168/151‑1 (MQ=37)

                tAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa                                                                                                                                         >  3:950938/1‑150 (MQ=38)

                   gCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGc                                                                                                                                     <  8:1879212/151‑1 (MQ=40)

                      ttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGt                                                                                                                                   <  2:739313/150‑1 (MQ=255)

                        gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAt                                                                                                                                <  2:129815/151‑1 (MQ=255)

                         ttCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTATCATCAGATACAAATGTCTATGTAAAACGAGTCAtt                                                                                                                               >  2:114797/1‑151 (MQ=11)

                           cATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt                                                                                                                             <  3:736011/151‑1 (MQ=255)

                             tGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTACAAATGGCTCTGAAAAAGACCTCAattta                                                                                                                            >  8:868725/1‑149 (MQ=11)

                              gCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCat                                                                                                                          <  5:1541769/151‑1 (MQ=255)

                                cGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAAAGAGACATTTTAatat                                                                                                                        >  8:332971/1‑151 (MQ=11)

                                  gATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTTTAAAATGAGACATTTTAATAttt                                                                                                                      >  6:1855892/1‑150 (MQ=11)

                                   aTGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTTTAAAAGGAGTCATTTTAATATTGt                                                                                                                     >  6:71499/1‑151 (MQ=255)

                                     gcggagTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTa                                                                                                                    <  4:214109/150‑1 (MQ=255)

                                       ggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGAc                                                                                                                 <  6:1732862/151‑1 (MQ=255)

                                        gcgTGAACGCCTTATCCTGCATGAAAACCCTTCTAATCCAATAGATTGCAGTGAACGTGTAGTCCTGATATGGGTAGCGCATCAGGCAATGTTGCTTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACa                                                                                                                <  4:1242105/151‑1 (MQ=17)

                                        gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACa                                                                                                                <  8:479113/151‑1 (MQ=255)

                                         cgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACaa                                                                                                               <  1:1219890/151‑1 (MQ=255)

                                           tGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGATTCAAATGGCGCTCAATAAGGCGTGAGTTTCAGATTGTAGACaagg                                                                                                             >  7:414970/1‑149 (MQ=14)

                                             aaCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTa                                                                                                           <  2:592904/151‑1 (MQ=255)

                                             aaCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAAGCGACATTTTAATATTGTATACAAAGt                                                                                                            >  2:983088/1‑150 (MQ=14)

                                              aCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAg                                                                                                          <  3:1585025/151‑1 (MQ=255)

                                              aCGCCTTATACTGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATATGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAg                                                                                                          <  4:356147/151‑1 (MQ=255)

                                                 ccTTATCCGTCATGAAAAACCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCt                                                                                                       <  4:1484085/151‑1 (MQ=255)

                                                   ttATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGATCCCTGTAGCGACACTTTCAAATGGAGATTTAAACGGAATCTTTATAAAATTGTAGACAACGTAGGAtt                                                                                                      >  4:701129/1‑150 (MQ=2)

                                                    tATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTTCACAAGCTAGGCTTTg                                                                                                    >  5:228264/1‑151 (MQ=17)

                                                    tATCCCGAATGAAAACCCTTAAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTATAAGGCGTCATTTTCATATTGTAGACAACGTAGGCttt                                                                                                     <  3:125201/150‑1 (MQ=255)

                                                     aTCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTg                                                                                                    <  3:201635/150‑1 (MQ=255)

                                                       ccGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTTATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGtt                                                                                                  <  5:822972/150‑1 (MQ=255)

                                                       ccGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGtt                                                                                                  <  4:91873/150‑1 (MQ=255)

                                                        cGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTATAAGGGGTCATTTTGATATTGTAGACAAAGTAGCCTTTTTTc                                                                                                 >  7:491730/1‑150 (MQ=14)

                                                         gtcATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGAATTATAATCGTATCGCATCAGTCAATGTTTCGTTTTTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt                                                                                               <  8:1134825/149‑1 (MQ=21)

                                                         ggCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt                                                                                               <  1:913723/151‑1 (MQ=255)

                                                           cATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGTCGCTGTAAAAGCCGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGc                                                                                             >  5:544134/1‑151 (MQ=255)

                                                            aTGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATAGATATCAAGTGGGTCTTTTAGAGGAATCATTTTCATATTGTAGACAAAGTAGGGTTTGTTCATgac                                                                                            >  4:1298972/1‑149 (MQ=14)

                                                               aaaaCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg                                                                                          >  2:847420/1‑150 (MQ=255)

                                                               aaaaCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGACgg                                                                                          >  3:571857/1‑150 (MQ=255)

                                                                  aCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGAGTAGCGAATCATGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGCCAACGTAGGCTTTGTTCATGCCGGATgg                                                                                      >  3:1319851/1‑150 (MQ=255)

                                                                   cccTTCAAATCCAATAGATTGCAGTGAACGTGGAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcg                                                                                     <  7:65291/151‑1 (MQ=255)

                                                                      ttCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAAGGCGTCATTTTCATATTGTAGACAACGAAGGCTTTGTTCATGCCGGAAgcggcg                                                                                  >  8:614107/1‑151 (MQ=255)

                                                                      ttCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGCATgccgcg                                                                                  >  1:799517/1‑151 (MQ=255)

                                                                       tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggcg                                                                                  <  2:1605993/150‑1 (MQ=255)

                                                                        cAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGATGTAAAACGCGTCATTTTCATATTGTATACAACGTAGGCTTTGTTCATGCCGGATGCGCCGtt                                                                                >  8:721098/1‑150 (MQ=255)

                                                                         aaaTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAACGCATCATATTCATATTGTATAAAACTTAGGCTTTGTTAATACCGGATGCGGCGTg                                                                                >  4:531343/1‑150 (MQ=18)

                                                                          aaTCCAATAGATTGCAGTGAACGTGTAGGACTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGaa                                                                              <  2:669172/151‑1 (MQ=255)

                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAc                                                                             <  5:1259754/151‑1 (MQ=255)

                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAAGGCGTCATTTTCATATTGTATAAAACGTAGGCTTTGTTCATGCCGGATCCGTCGTGaa                                                                              >  8:1049986/1‑150 (MQ=21)

                                                                           aTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGAGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAc                                                                             >  1:214877/1‑151 (MQ=255)

                                                                             gcAATAGATTGCAGTGAACGTTTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGAGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGc                                                                           <  6:522481/150‑1 (MQ=255)

                                                                             ccAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGc                                                                           <  3:1131660/151‑1 (MQ=255)

                                                                              cAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTAGACAAAGTAGGCTTTGTTCATGCCGCATGAGGCGTGAACgac                                                                          >  1:1822930/1‑149 (MQ=21)

                                                                               aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCt                                                                         <  1:86207/151‑1 (MQ=255)

                                                                               aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTATCAAATGGCCCTCTAAAAGGCGTAAATTTAATATTGTAGACAACGTAGGCTTTGTTCATGAAGGATTAGGAATGAACGccg                                                                         >  8:1241099/1‑150 (MQ=18)

                                                                               aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCATTTGTCATCAGTTTCAAATGGCGATGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGTCTTTTTTCATAAAGGATGCGGCGTGAACGCCt                                                                         >  2:367584/1‑151 (MQ=21)

                                                                                    agtGCAGTGCACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATcc                                                                    <  3:119276/149‑1 (MQ=255)

                                                                                    aTTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATcc                                                                    <  7:869227/151‑1 (MQ=255)

                                                                                       gCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGATAGCCTTATCCGGc                                                                 >  5:925188/1‑151 (MQ=255)

                                                                                        cAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCGTATCCGGc                                                                 >  7:942703/1‑150 (MQ=255)

                                                                                        cAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATCCGGCTTGAACGGCtaaacccga                                                                 >  6:151520/1‑142 (MQ=25)

                                                                                         aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGGCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAt                                                               <  7:21645/151‑1 (MQ=255)

                                                                                          gTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGAAGTCAATTTCATAATGTAGACAACCTAGGCTTTGTTAATGCCGGATGAGGCGTGAACGCCTTATcctcaat                                                               >  5:333957/1‑145 (MQ=21)

                                                                                                gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATTCCGGATGCGGCGTGAACGCCTTATACGGCATGAAAAcc                                                        >  1:484037/1‑151 (MQ=255)

                                                                                                gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTAATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAACAcc                                                        >  1:698178/1‑151 (MQ=255)

                                                                                                     ggCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCa                                                   <  7:1055902/151‑1 (MQ=255)

                                                                                                      gCCTGATAAGCGTAGCGCATCATGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaa                                                  <  8:1377627/151‑1 (MQ=255)

                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaa                                                  <  4:1704352/151‑1 (MQ=255)

                                                                                                        cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTAGACCACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGCCATGAAAACCCTTCTAAt                                                >  5:1763509/1‑151 (MQ=255)

                                                                                                         tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGGGTCATTTTAATATTGTAGACAAAGAAGGCTTTGTACATGACGGATGCGCCGTGACCGCCTTATCCGGCATGAAAACACTTCAAAt                                                >  2:1386343/1‑150 (MQ=18)

                                                                                                         tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAACACTTATACGGCATGAAAACCCTTAAAAt                                                >  4:112786/1‑150 (MQ=18)

                                                                                                           aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCa                                             <  8:1665606/151‑1 (MQ=255)

                                                                                                             aaGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGAGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAAGCCTTATCCGGCATGAAAACCCTTCAAATCCAAt                                           >  6:1364612/1‑151 (MQ=255)

                                                                                                              aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATa                                          <  3:853560/151‑1 (MQ=255)

                                                                                                                 gTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTAATATTGTAGAAAACGTAGGATTTGTTAATGACGGATGCGGAGTGAACGACTTATACGGCATGAAAACAATTAAAATCCAAt                                           >  6:356390/1‑147 (MQ=25)

                                                                                                                   aGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt                                      <  5:664134/150‑1 (MQ=255)

                                                                                                                    gggcATGAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGc                                    <  7:1583659/149‑1 (MQ=255)

                                                                                                                     cgcATCAGGCAATGTTTCGTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCa                                   <  2:1056404/151‑1 (MQ=255)

                                                                                                                     cgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGAAGACAACGTAGGCTTTGTACATGCCGGATCCGGCGTGAACGCCGGAAGCGGCATGACAACCCGTCAACTACAATAGaggcc                                    >  8:1586187/1‑146 (MQ=37)

                                                                                                                         tCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAACACCCTTCAAATCCAATACATTGCAGTg                                >  8:945794/1‑150 (MQ=255)

                                                                                                                         ccAGGCAACGTTGCGTTCCTCATCACTCTCAAATCCCGCTCTAAAATTATTCATATTCATATTCTAGACAACCTAGGATTAGATCATGCCGGATGCTGAGTGAACTCCTTATCCTTCATTAAAACCCTTCAAATCCAATAGATTGCAGTGa                               <  6:1323526/150‑1 (MQ=9)

                                                                                                                          cAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTTTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGa                               <  7:730138/150‑1 (MQ=255)

                                                                                                                          cAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGGCATTTTGATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAAGCCTTATACGGCATGAAAACCCTTCAAATCCAATAGAATGCAGTgc                               >  7:1119136/1‑149 (MQ=17)

                                                                                                                                 tGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtgt                         >  2:916277/1‑149 (MQ=255)

                                                                                                                                  gttggttttGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAg                       <  3:1474755/144‑1 (MQ=255)

                                                                                                                                     gCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCt                   >  1:1076868/1‑151 (MQ=255)

                                                                                                                                      cgtggggcagcaGGTTCAAATGTCTCCGATAAAGGCGGCATTTTCATTATCTAGACACGGGAGGGGTTGTGCCAGGCGGATGCTTCGTCTAGGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTg                  <  3:384808/141‑1 (MQ=2)

                                                                                                                                       gTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTg                  >  1:1673422/1‑150 (MQ=255)

                                                                                                                                           gTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa               >  7:1282486/1‑149 (MQ=40)

                                                                                                                                               taaggttCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt          <  2:27257/145‑1 (MQ=18)

                                                                                                                                                aaGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAg        <  2:1848123/150‑1 (MQ=18)

                                                                                                                                                  gTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcg      >  6:1588786/1‑151 (MQ=35)

CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATC  >  NC_000913/1552041‑1552341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`